| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,668 | T→C | 5.5% | intergenic (+480/‑451) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,668 | 0 | T→C | 5.5% | 19.8 ‑1.9 ‑0.0 | 237 | intergenic (+480/‑451) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (5/8): ref base (134/89): total (140/97) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.51e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.88e-01 | ||||||||||
Only 100 of 258 total aligned reads displayed.
CGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGC > NC_014034/1395569‑1395768
|
cgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTg > 2:2301745/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCAt > 2:3596065/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCAt > 1:2334190/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCCTg > 2:4353258/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATg > 2:2759318/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATg > 2:1104328/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATg < 1:4189995/101‑1 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTCACGGT.TTGGGGCGGA..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCtttcaatg < 2:2867668/101‑8 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGt < 1:1019182/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACCCCCTTGCGGCT.T.GTCACTTCCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAg < 2:593523/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAg < 1:3178283/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGt > 1:3488789/1‑101 (MQ=255)
ccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGt < 2:3507559/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGAGTCGCTCCCCCCGCGGGGGGGGGGGTCGAAACACCTGCAGTTAGt > 2:3689276/1‑101 (MQ=38)
cgcgGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTc > 1:1436795/1‑101 (MQ=255)
gggggCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggc < 1:2171506/101‑1 (MQ=255)
ggggCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggcg < 2:3389475/101‑1 (MQ=255)
gCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.Gc < 2:3128638/101‑1 (MQ=255)
gTGGATCGAAACCCCCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAg < 2:1988671/101‑1 (MQ=255)
tGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGt < 1:787559/101‑1 (MQ=255)
tGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGt > 1:2102832/1‑101 (MQ=255)
tGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGt > 2:1719699/1‑101 (MQ=255)
ggATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGtt < 2:2896014/101‑1 (MQ=255)
ggATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGtt < 1:1249426/101‑1 (MQ=255)
gATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTc < 1:3398163/101‑1 (MQ=255)
aTCGAAACCACCTTGCGGAT.T.GTCACTTTCGGGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCg > 1:4130328/1‑101 (MQ=255)
aTCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCg > 1:4392892/1‑101 (MQ=255)
aTCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCg < 2:1210393/101‑1 (MQ=255)
aTCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCg > 1:1378243/1‑101 (MQ=255)
aTCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCg > 2:4313303/1‑101 (MQ=255)
aTCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCg < 1:1759300/101‑1 (MQ=255)
cGAGACCACATTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGGGGAGCGAAACAGCTGCACGCAGTCGGCGC.GCCGCTCGA.g > 2:162314/1‑101 (MQ=25)
gAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.Gc < 1:2759516/101‑1 (MQ=255)
gAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.Gc > 1:2704004/1‑101 (MQ=255)
gAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.Gc > 2:217532/1‑101 (MQ=255)
gAAACCACCTTGCGGAT.T.GTCACGTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.Gc < 2:655753/101‑1 (MQ=255)
aaaCCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.Gcc > 2:2451416/1‑101 (MQ=255)
aaaCCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCACTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.Gcc > 2:943537/1‑101 (MQ=255)
ccaccTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCa < 2:4232643/101‑1 (MQ=255)
caccTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAg > 1:2184386/1‑101 (MQ=255)
ccTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTc < 1:3596333/101‑1 (MQ=255)
cTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCg < 2:3550826/101‑1 (MQ=255)
ttGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGc > 2:1897122/1‑101 (MQ=255)
tGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCt < 1:4413393/101‑1 (MQ=255)
gCGGAT.T.GTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTc < 1:93345/101‑1 (MQ=255)
gAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcccc > 1:3339632/1‑101 (MQ=255)
gAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcccc > 1:4092808/1‑101 (MQ=255)
gAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcccc > 2:4133052/1‑101 (MQ=255)
gAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcccc > 2:465538/1‑101 (MQ=255)
gt.t.GTCACTTTCGCGGGGCGAAGCGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTccccc < 2:874945/100‑1 (MQ=255)
aT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTccccc < 1:1519990/101‑1 (MQ=255)
gTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCcgc > 1:1189058/1‑101 (MQ=255)
cACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgg > 1:525253/1‑101 (MQ=255)
ccTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCggg < 1:1624763/100‑1 (MQ=255)
aCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCggg > 1:4258449/1‑101 (MQ=255)
tttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCggggg > 2:3945711/1‑101 (MQ=255)
cgcgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGT.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGt < 2:1151018/101‑1 (MQ=255)
cgcgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCgg > 2:2735204/1‑100 (MQ=255)
cgcgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGt > 1:2213866/1‑101 (MQ=255)
cgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTgg > 1:1708800/1‑101 (MQ=255)
cGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:374188/101‑1 (MQ=255)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:3120485/1‑101 (MQ=255)
ctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:4626361/99‑1 (MQ=2)
ctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:1510206/99‑1 (MQ=2)
tgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:2043302/2‑101 (MQ=2)
tgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:3025890/2‑101 (MQ=2)
aGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 2:3471186/1‑101 (MQ=255)
cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg > 2:489493/1‑101 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGACCGAAACTgg > 1:2042608/1‑101 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GACGCAGGCGCTTCCCCCGCGGGGGGGTGGATAGAAAATgg > 2:2704886/1‑101 (MQ=37)
gTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgg < 1:190855/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTAt < 1:329752/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGa < 1:2870864/101‑1 (MQ=255)
cgggggggGGTGGATCGAAACATCTGCATGTAGTCGGGGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTgg < 2:3200289/98‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACATGTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgc > 2:4599516/1‑101 (MQ=255)
gcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACTGGTAGGGATCTGgc > 2:374939/1‑101 (MQ=255)
ggggggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgcg < 2:221146/100‑1 (MQ=255)
ggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCaaa < 1:85685/101‑1 (MQ=255)
gCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAAc < 1:3781842/101‑1 (MQ=255)
gCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAAc > 1:2491245/1‑101 (MQ=255)
gTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACgg > 2:4544386/1‑101 (MQ=255)
gTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACgg > 2:1390499/1‑101 (MQ=255)
tGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGa > 2:1419203/1‑101 (MQ=255)
tGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGa < 1:353206/101‑1 (MQ=255)
tGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGa > 2:3711471/1‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa > 2:4207078/1‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa > 1:4435724/1‑101 (MQ=255)
gATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaaa < 2:389278/101‑1 (MQ=255)
gATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaaa > 1:196784/1‑101 (MQ=255)
aTCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAg < 1:3653671/101‑1 (MQ=255)
tCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGt > 1:259671/1‑101 (MQ=255)
tCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGt > 2:2665598/1‑101 (MQ=255)
cGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTc < 1:2270786/101‑1 (MQ=255)
cGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTc > 2:2500292/1‑101 (MQ=255)
gAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCt < 1:1056151/101‑1 (MQ=255)
gAAACATCGGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCt < 1:2778536/101‑1 (MQ=255)
cATCTGCATGTGGGCGGGGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcg < 1:397770/101‑1 (MQ=255)
cATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTcagatc > 1:2410716/1‑96 (MQ=255)
ctCTGGATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgt < 2:761454/100‑1 (MQ=255)
tCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgtc < 2:4617803/101‑1 (MQ=255)
|
CGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGC > NC_014034/1395569‑1395768
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|