| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,396,024 | C→A | 13.1% | intergenic (+836/‑95) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,396,024 | 0 | C→A | 13.1% | 72.2 0.0 0.0 | 228 | intergenic (+836/‑95) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (13/17): ref base (87/111): total (100/128) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 246 total aligned reads displayed.
TCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGAT > NC_014034/1395924‑1396124
|
tCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGc < 2:2295264/101‑1 (MQ=255)
cGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGcc > 2:254475/1‑101 (MQ=255)
cGAAACGATGCGTTCACGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGcc > 1:1285202/1‑101 (MQ=255)
gAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCt < 2:2873276/101‑1 (MQ=255)
aaaCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTg < 1:3418462/101‑1 (MQ=255)
aaaCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTg > 1:2084398/1‑101 (MQ=255)
aaCGCTGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGc < 2:2324272/101‑1 (MQ=255)
aaCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGc > 1:4653511/1‑101 (MQ=255)
aaCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGc > 2:2448755/1‑101 (MQ=255)
aaCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGc < 2:3003347/101‑1 (MQ=255)
cGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.cg < 2:2567666/101‑1 (MQ=255)
cGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCg < 2:1699253/101‑1 (MQ=255)
tGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTcccc > 1:3320483/1‑101 (MQ=255)
ccTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCcg < 2:522928/101‑1 (MQ=255)
tACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCcgcg > 2:2652065/1‑101 (MQ=255)
tACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCcgcg < 1:2550393/101‑1 (MQ=255)
gTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCgggg > 2:875408/1‑101 (MQ=255)
gTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCCC.ACGCCTGC.CGC..GTCGCTCCCCCCGCgggg < 1:2868459/101‑1 (MQ=255)
cGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGc < 2:148951/101‑1 (MQ=255)
gggCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCg < 2:3790043/101‑1 (MQ=255)
gggCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCg > 1:2970081/1‑101 (MQ=255)
ggCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGt < 2:4563317/101‑1 (MQ=255)
ggCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGt < 1:3451351/101‑1 (MQ=255)
cAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTgg > 2:695263/1‑101 (MQ=255)
cAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTgg > 2:3148284/1‑101 (MQ=255)
cAGTGGACTGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTgg < 1:3190873/101‑1 (MQ=255)
tctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGa < 1:2224401/94‑1 (MQ=2)
gTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGAt > 1:3576604/1‑101 (MQ=255)
tGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 2:1905792/101‑1 (MQ=255)
tGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:4469809/101‑1 (MQ=255)
ctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGAt > 1:3210158/7‑101 (MQ=9)
ctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:4377724/95‑1 (MQ=9)
ggcgcggTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:203776/96‑1 (MQ=9)
ggACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:1696571/1‑101 (MQ=255)
gcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:1989406/97‑1 (MQ=9)
gcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:2213099/99‑1 (MQ=9)
cTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 1:4055892/1‑101 (MQ=255)
cTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:2609692/101‑1 (MQ=255)
tGGTCGCTCCCCCGGCGGGGGCGTGGATCGAAACTCGCCCTCCATCCACGCTTGCCTC.ACGCCTGC.CCC..GTCGCTCCACCCGCGGGGGCGTGGagctgaac > 2:405819/1‑94 (MQ=37)
tGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 2:3553173/1‑101 (MQ=255)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa < 2:121286/101‑1 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct > 2:4120081/1‑100 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAg > 1:1779890/1‑101 (MQ=255)
gTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAg < 1:999350/101‑1 (MQ=255)
gTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAg < 1:653094/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgg < 2:1031684/101‑1 (MQ=255)
gcGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgg < 2:2940811/100‑1 (MQ=255)
gcGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgg < 2:145249/100‑1 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtg > 1:1243905/1‑98 (MQ=2)
tgcgcccGCGGGGGCGTGTATCGAAACTCGGCCTCGATCCG.GTCAGCCTCGTAGTGCGCGCTG..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg < 2:1095472/97‑7 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg > 1:2782159/1‑95 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCa > 2:3668696/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCa < 2:1262980/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatga < 1:4268064/101‑8 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCAt < 2:3277937/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCAt < 2:1917427/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCAt < 1:2190562/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgacc > 2:3971098/1‑92 (MQ=2)
cgcgGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGAt < 1:37383/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGGGCATCTGAGGt > 1:1338761/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGt > 1:4477014/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGt < 1:226760/101‑1 (MQ=255)
gggggCGTGGATGGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGta > 1:2531607/1‑101 (MQ=255)
ggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat > 1:1646869/1‑101 (MQ=255)
ggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCCGCATCTGATGtat > 1:3761663/1‑101 (MQ=255)
gggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata < 1:4599816/101‑1 (MQ=255)
gggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.AGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata < 1:946039/101‑1 (MQ=255)
cGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGc > 2:3342787/1‑101 (MQ=255)
gTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGcc > 2:721165/1‑101 (MQ=255)
gTGGATCGAAACTCGCCCTCGATCCGCGCTGGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGcc < 1:1509635/101‑1 (MQ=255)
tGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGccc < 2:215449/101‑1 (MQ=255)
gATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCgg > 2:4355629/1‑101 (MQ=255)
aTCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCCGATGTATATGCCCGGt < 1:4074839/101‑1 (MQ=255)
tCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTg < 1:2005719/101‑1 (MQ=255)
gAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag > 1:2499203/1‑101 (MQ=255)
gAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GCCGCTCCCCCCGCGGGGGCGTGGATCGCAACAGCCGCATCTGATGTATATGCCCGGTgag > 1:1494069/1‑101 (MQ=255)
aCTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACg < 2:3919809/101‑1 (MQ=255)
cGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt < 1:1814049/101‑1 (MQ=255)
cGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt < 2:1646758/101‑1 (MQ=255)
cccTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGt > 2:3372681/1‑101 (MQ=255)
cccTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGt < 1:1252788/101‑1 (MQ=255)
ccTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTc < 1:3914908/101‑1 (MQ=255)
tCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGc > 1:885535/1‑101 (MQ=255)
cGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGACACAGGCGCATCTCATGTATATGCCCGGTGGGACGGCtcgcgcc > 2:3870468/1‑95 (MQ=38)
cGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCt > 1:2161361/1‑101 (MQ=255)
ccGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccc > 2:2749523/1‑101 (MQ=255)
cgcgCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTccccc > 1:4359143/1‑101 (MQ=255)
gcgcTTGCCTC.CCGCCTAC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccccc < 2:4187224/101‑1 (MQ=255)
gcgcTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccccc > 1:4090804/1‑101 (MQ=255)
gcgcTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccccc < 2:4476719/101‑1 (MQ=255)
cgcTTCCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCcg < 2:2133090/101‑1 (MQ=255)
gcTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCcgc < 1:1042640/101‑1 (MQ=255)
ttGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCgg > 2:4507021/1‑101 (MQ=255)
gCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCgggg > 1:2901705/1‑101 (MQ=255)
gCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCgggg < 2:936394/101‑1 (MQ=255)
cTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc < 2:2615807/101‑1 (MQ=255)
cTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc < 1:2697158/101‑1 (MQ=255)
cGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTgg < 1:721240/101‑1 (MQ=255)
ccTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:3963340/101‑1 (MQ=255)
ccTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:2342707/101‑1 (MQ=255)
|
TCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGAT > NC_014034/1395924‑1396124
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|