BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,468,465	C→G	100%	G457A (GGC→GCC)	RCAP_rcc01364 ←	signal transduction histidine kinase

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,468,465	0	C→G	100.0%	637.0	168	G457A (GGC→GCC)	RCAP_rcc01364	signal transduction histidine kinase
Reads supporting (aligned to +/- strand): new base (69/99): ref base (0/0): total (69/99)

Only 100 of 181 total aligned reads displayed.


TCAGGCCTGCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGCCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATCGCCGTGCCCTCGGACGAGCT  >  NC_014034/1468368‑1468562


tCAGGCCTGCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcag                                                                                                  >  2:436045/1‑101 (MQ=255)


tCAGGCCTGCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcag                                                                                                  <  1:208998/101‑1 (MQ=255)


  aGGCCTGCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtg                                                                                                >  1:740645/1‑101 (MQ=255)


  aGGCCTGCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcaggg                                                                                                >  1:3738012/1‑99 (MQ=255)


    gtgagCGTGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtc                                                                                              >  2:2805914/5‑101 (MQ=255)


    gCCTGCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtc                                                                                              <  1:3774274/101‑1 (MQ=255)


     ccTGCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcg                                                                                             <  2:560577/101‑1 (MQ=255)


      cTGCGAGATCCTCAGCCCGGGCGCGGGGCGCGGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgg                                                                                            <  2:2627104/101‑1 (MQ=255)


      cTGCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGGTGTCGTCGGcagtgtcgg                                                                                            >  1:3223581/1‑101 (MQ=255)


       tGCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtggcggg                                                                                           >  2:624629/1‑101 (MQ=255)


        gCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggg                                                                                          <  2:2860198/101‑1 (MQ=255)


        gCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggg                                                                                          <  1:3390563/101‑1 (MQ=255)


        gCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggg                                                                                          <  2:3160071/101‑1 (MQ=255)


          gagaTCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggc                                                                                        >  1:2177635/1‑101 (MQ=255)


          gagaTCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggc                                                                                        >  2:4332680/1‑101 (MQ=255)


            gaTCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggcag                                                                                      <  2:1154938/101‑1 (MQ=255)


             aTCCGCGGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggcagt                                                                                     <  1:4646503/101‑1 (MQ=255)


             aTCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggcagt                                                                                     <  1:3825295/101‑1 (MQ=255)


             aTCCGCAGCCCGGGCGCGGGGCAGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggccgg                                                                                     >  2:1404762/1‑98 (MQ=255)


              tCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggccggg                                                                                    >  2:2573606/1‑97 (MQ=255)


               ccGCAGCCGGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggcagtgt                                                                                   <  2:321939/101‑1 (MQ=255)


                 gCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggcagtgtcg                                                                                 <  1:3085794/101‑1 (MQ=255)


                 gCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggcagtgccg                                                                                 >  2:3596518/1‑101 (MQ=255)


                  cAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggcagtgtcgg                                                                                <  1:2331969/101‑1 (MQ=255)


                  cAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGCGCGGCGGGATGTCGTCGGcagtgtcgggggcagcgtcgg                                                                                >  2:3870672/1‑101 (MQ=255)


                   aGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggcagtgtcggg                                                                               <  1:4126363/101‑1 (MQ=255)


                   aGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggcagtgtcggg                                                                               <  1:3166367/101‑1 (MQ=255)


                    gCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGcagtgtcgggggcagtgtcgggg                                                                              >  1:2162083/1‑101 (MQ=255)


                      ccGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCagtgtcgggggcagtgtcgggggc                                                                            >  1:1153055/1‑101 (MQ=255)


                      ccGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCagtgtcgggggcagtgtcgggggc                                                                            >  1:3128301/1‑101 (MQ=255)


                      ccGGGCGCGGGCCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCagtgtcgggggcagtgtcgggggc                                                                            <  2:3737737/101‑1 (MQ=255)


                       cGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAgtgtcgggggcagtgtcgggggca                                                                           <  2:2322797/101‑1 (MQ=255)


                        gggCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGtgtcgggggcagggtcgggggcag                                                                          >  1:4526148/1‑101 (MQ=255)


                           ggcgGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTcgggggcagtgtcgggggcagtgt                                                                       <  2:716525/100‑1 (MQ=255)


                           cgcgGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTcgggggcagtgtcgggggcagtgt                                                                       >  2:4531963/1‑101 (MQ=255)


                             ctgggCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGggggcagtgtcgggggcagtgtc.g                                                                    <  1:2454518/99‑1 (MQ=255)


                               gggCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGggccgggtcgggggccgtgtc.ggg                                                                  >  2:4098564/1‑101 (MQ=255)


                                 gCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGGGTCGGGGGCAGGGGC.CGGcc                                                                >  2:302767/1‑101 (MQ=255)


                                    gcgcCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCggg                                                             <  1:913713/101‑1 (MQ=255)


                                      gcccgcccGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGtt                                                           <  1:2287192/101‑1 (MQ=255)


                                       cccgcccgGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGttt                                                          <  2:1742196/101‑1 (MQ=255)


                                        ccgcccgGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTc                                                         <  1:3342597/101‑1 (MQ=255)


                                          gcccgGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGGCGGGGTTCCt                                                       >  1:1900180/1‑101 (MQ=255)


                                          gcccgGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCt                                                       <  2:1264037/101‑1 (MQ=255)


                                          gcccgGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGGTTCCt                                                       >  2:381900/1‑101 (MQ=255)


                                          gcccgGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGGGTCGGGGGCGGTGTCGGGGCGGGGTTTcc                                                        >  2:1007225/1‑101 (MQ=255)


                                           cccgGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTc                                                      <  2:393560/101‑1 (MQ=255)


                                            ccgGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTcg                                                     <  1:4543024/101‑1 (MQ=255)


                                            ccgGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTcg                                                     <  1:1947125/101‑1 (MQ=255)


                                             cgGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTcgg                                                    <  1:2727671/101‑1 (MQ=255)


                                              ggCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTcggc                                                   <  2:1811031/101‑1 (MQ=255)


                                              ggCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTcggc                                                   <  1:3486255/101‑1 (MQ=255)


                                               gCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGGTTCCTcggcg                                                  >  1:4309068/1‑101 (MQ=255)


                                                cTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGGGTC.GGGCCGGGGTTCCTcggcgg                                                 >  2:827173/1‑101 (MQ=255)


                                                 tGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCggg                                                <  2:1152963/101‑1 (MQ=255)


                                                 tGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGGGTC.GGGCCGGGGTTTCTCGGCggg                                                >  1:1040533/1‑101 (MQ=255)


                                                   cgcCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCggggg                                              <  2:740570/101‑1 (MQ=255)


                                                   cgcCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGGGTG.GGGGCGGGGTTTCTCGGGggggg                                              >  1:3200607/1‑101 (MQ=255)


                                                    gcCCGGCCCTGCGGCTGCGGCGTCTCGGGGGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGc                                             <  2:2881928/101‑1 (MQ=255)


                                                     cccGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGGTTTCTCCGCggggggc                                            >  1:2864097/1‑99 (MQ=255)


                                                      cggccccTGGGGCTGCGGCGTCTCGGGCGGCGGGGTGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGa                                           <  1:3531318/97‑1 (MQ=39)


                                                       cGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGAt                                          <  1:3012617/101‑1 (MQ=255)


                                                        ggCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATc                                         <  2:2161933/101‑1 (MQ=255)


                                                          cccTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGGGTC.GGGCCGGGGTTCCTCGGCGGGGGGGGTCgg                                       >  2:4444248/1‑101 (MQ=255)


                                                           ccTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGGGTC.GGGGCGGGTTTCCTCGGCgggggggggcggg                                      >  1:1820188/1‑93 (MQ=255)


                                                            ctgcggctgcggCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCgggggggggcgggg                                     >  1:2739353/1‑92 (MQ=255)


                                                            ctgcggctgcggCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGgca                                     <  1:256255/101‑1 (MQ=255)


                                                            ctgcggctgcggCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGgca                                     <  2:2432779/101‑1 (MQ=255)


                                                            ctgcggctgcggCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGgca                                     <  2:1656840/101‑1 (MQ=255)


                                                            ctgcggctgcggCGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGGTTCCTCGGCGGGGGGGGTCgggg                                     >  2:2579335/1‑99 (MQ=255)


                                                            cggcgggtgcggcGTCTCGGGCGGCGGGATTTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGgca                                     <  2:1926555/99‑1 (MQ=255)


                                                             tgcggctgcggcGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGGCGGGTTTCCTCGGCGGGGGGGGTCGggag                                    >  2:3370441/1‑101 (MQ=255)


                                                             tgcggctgcggcGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGGGTC.GGGCCGGGTTTCCTCGGGggggggggggggccg                                    >  1:3602536/1‑91 (MQ=255)


                                                             cgcggctgcggcGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGCGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGgcag                                    <  1:3989939/100‑1 (MQ=255)


                                                               cggctgcggcGTCTCTGGGGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGgcagca                                  <  1:3865799/101‑1 (MQ=255)


                                                                ggctgcggcGTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGcagcag                                 <  2:3317663/101‑1 (MQ=255)


                                                                        cgTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGGTTCCTCGGCGGGGGGGGACGGCCGCagaagaagga                         >  2:465402/1‑97 (MQ=255)


                                                                         gTCTCGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGGAGCAGAAAAAGC.At                       >  1:1386710/1‑101 (MQ=255)


                                                                          tctcGGGGGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATc                      <  1:1007308/101‑1 (MQ=255)


                                                                          tctcGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATc                      <  1:2806130/101‑1 (MQ=255)


                                                                          gctcGGGCGGCGGGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATc                      <  1:2444393/100‑1 (MQ=255)


                                                                              gggCGGCGGGATTTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGGGGTCGGCAGGCGAAAATGC.ATCCCCg                  >  1:1423320/1‑101 (MQ=255)


                                                                               ggcggcGGGATGGCGGGGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATCGCCGt                 <  2:2863881/101‑1 (MQ=39)


                                                                                 cggcggGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGGGAGTGGGAGAAAGAGAGGC.ATCGcccggc               >  2:1472692/1‑97 (MQ=255)


                                                                                 cggcggGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGGTTCCTCGGCGGGGGGGGTCGGCAGCCGAAGATGC.ATCCccccgc               >  2:4243333/1‑97 (MQ=255)


                                                                                   gcggGATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGGGGTCGGCAGCAGAAGATGG.ATCGCCggggcc             >  2:4515904/1‑96 (MQ=255)


                                                                                     gggATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGGGGTTGGCAGCTGGAGGTGG.ATCGCCCGGccccc           >  1:2462548/1‑99 (MQ=255)


                                                                                      ggATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGGGGTCGGCAGCCGAAAAAGG.ATCGCCGTGCCCCCg          >  2:150536/1‑101 (MQ=255)


                                                                                      ggATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATCGCCGTGCCCTCg          <  2:2460602/101‑1 (MQ=255)


                                                                                       gATGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATCGCCGTGCCCTCgg         <  2:1944387/101‑1 (MQ=255)


                                                                                        aTGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATCGCCGTGCCCTCGGa        <  1:827249/101‑1 (MQ=255)


                                                                                         tGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATCGCCGTGCCCTCGGAc       <  2:1508614/101‑1 (MQ=255)


                                                                                         tGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATCGCCGTGCCCTCGGAc       <  1:430645/101‑1 (MQ=255)


                                                                                         tGTCGTCGGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATCGCCGTGCCCTCGGAc       <  1:381937/101‑1 (MQ=255)


                                                                                           tcgtcgGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGGGGTCGGCAGGCGAAGATGCAACCCCCGGGCCCTCggcca      >  2:3681380/1‑98 (MQ=255)


                                                                                            cgtcgGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGGGATCGGCAGCAGAAGAAGC.ATCGCCGTGCCCTCGGGCGAg    >  2:1047210/1‑101 (MQ=255)


                                                                                             gtcgGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTTCTCGGCGGGGGGGATCGGGAGGAGAAGATGG.ATCCCCCGGCCCTCGGGCGAgg   >  1:2361618/1‑100 (MQ=255)


                                                                                             gtcgGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGGAGCAGAAGATGC.ATCGCCCCGGCCTCGGGCggcg   >  1:174833/1‑98 (MQ=255)


                                                                                              tcgGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGGAGCAGAAGATGC.ATCGCCGTGCCCTCGGGCGAGCt  >  2:1875028/1‑101 (MQ=255)


                                                                                              tcgGCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCCGCAGAAGATGC.ATCGCCGTGCCCCCGGACGAGCt  >  1:4243430/1‑101 (MQ=255)


TCAGGCCTGCGAGATCCGCAGCCCGGGCGCGGGGCCGCGCCCGCCCGGCTGCGCCCGGCCCTGCGGCTGCGGCGTCTCGGGCGGCGGGATGTCGTCGCCAGTGTCGGGGGCAGTGTCGGGGGCAGTGTC.GGGCCGGGTTTCCTCGGCGGGGGCGATCGGCAGCAGAAGATGC.ATCGCCGTGCCCTCGGACGAGCT  >  NC_014034/1468368‑1468562

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 23 ≤


ATCG

< 32 ≤


ATCG

< 40 ≤


ATCG