| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,734,838 | G→T | 3.5% | intergenic (‑91/+102) | RCAP_rcc01603 ← / ← RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,734,838 | 0 | G→T | 3.5% | 8.0 ‑1.4 ‑0.0 | 194 | intergenic (‑91/+102) | RCAP_rcc01603/RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (5/2): ref base (81/106): total (86/108) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.45e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.69e-01 | ||||||||||
Only 100 of 202 total aligned reads displayed.
GTCGTGTCATCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.CCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCC > NC_014034/1734738‑1734936
|
gTCGTGTCATCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGgcg > 2:4027798/1‑101 (MQ=255)
tCGTGTCATCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGgcgc > 1:4619201/1‑101 (MQ=255)
gtgtCATCGAACCCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.g < 2:241349/101‑1 (MQ=255)
gtgtCATCGAAACCTCCGGGGAATGGCGCTTCCAAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.g < 2:1151991/101‑1 (MQ=255)
gtgtCATCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCACGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGGAGGGGGGCGCT.g > 1:1835025/1‑101 (MQ=255)
gtCATCGAACCCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.cc < 2:4621137/101‑1 (MQ=255)
gtCATCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.cc < 1:2639638/101‑1 (MQ=255)
aTCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGGGCT.G.ccc.cc > 2:824162/1‑101 (MQ=255)
aTCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.ccc.cc < 1:4042874/101‑1 (MQ=255)
cGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.ccc.cccg > 2:3070859/1‑99 (MQ=255)
aaaCCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGGGCG.G.cgc.cccccc > 2:1232062/1‑97 (MQ=255)
aaaCCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.ccc.cccgtc > 1:3787941/1‑97 (MQ=255)
aaaCCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.ccc.cccgtc > 2:2334089/1‑97 (MQ=255)
ccTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTg < 2:3720044/101‑1 (MQ=255)
cTCGGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGc < 2:260627/101‑1 (MQ=255)
cTCCGGGGAAGGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGc < 2:1619480/101‑1 (MQ=255)
ccGGGAAATGGCGCATCCTAACAGCCGGGGCGGGCAAGCCAAAAGCTGACGCTGGGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCATGCgg < 1:318334/101‑1 (MQ=37)
ggggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGAc > 2:1021212/1‑101 (MQ=255)
ggggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGAc < 2:2230495/101‑1 (MQ=255)
gggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACt > 1:1201491/1‑101 (MQ=255)
ggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTc < 2:2547543/101‑1 (MQ=255)
ggCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTcccccc > 1:2553774/1‑101 (MQ=255)
ggCGCAGCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTcccccc < 1:1754898/101‑1 (MQ=255)
ggCCCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTcccccc < 2:1436771/101‑1 (MQ=255)
gcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCggg < 2:3905654/101‑1 (MQ=255)
tCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGata < 2:1457478/101‑1 (MQ=255)
tCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGata < 1:3574375/101‑1 (MQ=255)
tCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGata > 1:80430/1‑101 (MQ=255)
ccTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCgggggat > 1:1640963/1‑97 (MQ=255)
tAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGGTAttt > 2:3520758/1‑101 (MQ=255)
tAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATAttt < 2:3580478/101‑1 (MQ=255)
caggcgcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCCTCCGCCGGCGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATAttt < 2:616689/96‑1 (MQ=18)
gcagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTAt < 1:2365798/101‑1 (MQ=255)
gcagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTAt > 1:416197/1‑101 (MQ=255)
cagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATg < 2:3397913/101‑1 (MQ=255)
agcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATgg < 1:117366/101‑1 (MQ=255)
gcCGGGGCGGGCAAGCCAAGGGCTGACGCTGGGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGc < 1:2462901/101‑1 (MQ=21)
gcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGc < 2:1882044/101‑1 (MQ=255)
cGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCaa > 2:3336391/1‑101 (MQ=255)
ggggCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAg > 1:4111430/1‑101 (MQ=255)
ggggCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAg > 1:2277184/1‑101 (MQ=255)
gggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.a < 1:2761632/101‑1 (MQ=255)
gggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.a < 1:2419850/101‑1 (MQ=255)
ggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGGAAG.At > 1:1163249/1‑101 (MQ=255)
ggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.CCCTCCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.At < 2:752858/101‑1 (MQ=255)
gcgggcTAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATg < 1:765635/101‑1 (MQ=255)
gcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATg < 1:3516638/101‑1 (MQ=255)
cgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGa < 2:3657040/101‑1 (MQ=255)
gggcAAGCCAAAGGCTGTCGGTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGaa < 1:1971221/101‑1 (MQ=18)
gggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGaa < 1:3776779/101‑1 (MQ=255)
ggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGaaa > 2:681505/1‑101 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTg < 2:1980975/101‑1 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTg > 2:1070973/1‑101 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTg > 2:4229995/1‑101 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGAAATTTATTGGAAG.AAGaaaacg > 1:1604283/1‑98 (MQ=18)
gCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.g < 1:1580250/101‑1 (MQ=255)
ccAATGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.gg < 2:2930853/101‑1 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGcc > 2:2059384/1‑101 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGcc > 2:197414/1‑101 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGcc > 1:4395081/1‑101 (MQ=255)
ggCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCCGGGCAATTATGGCAAGAATAAAATGGC.GGCCtc > 1:5823/1‑100 (MQ=17)
gCTTACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCa < 2:910693/101‑1 (MQ=255)
gCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCa < 1:1068916/101‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTCC.CCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCtt < 1:3938117/101‑1 (MQ=255)
cGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTg > 1:712115/1‑101 (MQ=255)
gCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGc < 2:1366481/101‑1 (MQ=255)
gCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGc > 2:4465189/1‑101 (MQ=255)
gCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGc < 1:3065265/101‑1 (MQ=255)
cTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGcc > 1:662959/1‑101 (MQ=255)
gCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCAt < 1:1548212/101‑1 (MQ=255)
cGTCAGCCGGCGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATa < 2:456167/101‑1 (MQ=255)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGTGAAATTTATGGCAAG.ATGAAACTGC.GACCTTCATCTTGCCATa > 1:436418/1‑101 (MQ=17)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATa > 1:474469/1‑101 (MQ=255)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATa > 1:2294734/1‑101 (MQ=255)
gTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATaa > 2:1097034/1‑101 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAat > 2:2509379/1‑101 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAat < 1:3849642/101‑1 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGA.GGCCTTCATATTGCCATAAat > 2:4527879/1‑101 (MQ=17)
aGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAata > 2:2922739/1‑101 (MQ=255)
cGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATcc < 2:372355/101‑1 (MQ=255)
cGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATcc > 2:4407014/1‑101 (MQ=255)
gACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTCCATCTTGCCATAAATATccc > 1:295962/1‑101 (MQ=255)
gcgggccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.g < 2:557275/100‑1 (MQ=255)
cgggccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.gg > 1:2105841/1‑101 (MQ=255)
gggccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATTCC.ggg > 2:35097/1‑101 (MQ=255)
tgacggacggggggCTCT.G.CCC.CCCGGCTTCG..CTCCCCCCGGGATATTTGCGGCAAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTg > 2:18019/9‑101 (MQ=2)
gccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 1:848624/101‑1 (MQ=255)
ccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGGAAG.ATGAAACTGC.GGGCTTCATCTTGCCCTAAATATCCC.cggggg > 1:1745823/1‑99 (MQ=14)
ccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTg < 1:1378546/101‑1 (MQ=255)
acggacggggggCTCT.G.CCC.CCCGGCTTCG..CTCCCCCCGGGATATTTGCGGCAAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa > 2:923127/7‑99 (MQ=2)
acggacggggggCTCT.G.CCC.CCCGGCTTCG..CTCCCCCCGGGATATTTGCGGCAAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa < 2:4332654/95‑3 (MQ=2)
acggacggggggCTCT.G.CCC.CCCGGCTTCG..CTCCCCCCGGGATATTTGCGGCAAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa > 1:4440965/7‑99 (MQ=2)
gggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCg > 2:2106101/1‑101 (MQ=255)
gcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCggg < 2:3891332/101‑1 (MQ=255)
gacggggggCGCT.G.CCC.CCCGGCTTCG..CTCCCCCCGGGATATTTGCGGCAAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaattg < 1:3012753/98‑6 (MQ=9)
cAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCgggg > 1:4273313/1‑101 (MQ=255)
aGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGc > 2:4078406/1‑101 (MQ=255)
aGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGc < 2:1640858/101‑1 (MQ=255)
gcgcT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGcc > 1:3890433/1‑101 (MQ=255)
cgcT.GCCCC.CCGTCCTGCGGACTCCCCCCGGGATAGTTATAGTAAG.CTGCAACTAG.CGCCCTCAACTTGCCCTGAATATGCC.GGGGGGTGGGGTAGAGccc > 2:4166224/1‑101 (MQ=2)
|
GTCGTGTCATCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.CCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGCAAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCC > NC_014034/1734738‑1734936
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|