| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,734,847 | G→C | 4.0% | intergenic (‑100/+93) | RCAP_rcc01603 ← / ← RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,734,847 | 0 | G→C | 4.0% | 9.6 ‑0.8 ‑0.0 | 196 | intergenic (‑100/+93) | RCAP_rcc01603/RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (5/3): ref base (83/105): total (88/108) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.71e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.24e-01 | ||||||||||
Only 100 of 199 total aligned reads displayed.
ACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.CCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGA > NC_014034/1734752‑1734947
|
aCCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCt < 1:2977647/101‑1 (MQ=255)
cTCGGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGc < 2:260627/101‑1 (MQ=255)
ggggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGAc < 2:4610887/101‑1 (MQ=255)
ggggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGAc < 2:2230495/101‑1 (MQ=255)
gggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACt > 1:1201491/1‑101 (MQ=255)
gggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACt > 1:2346611/1‑101 (MQ=255)
aaTGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.ccc < 2:4511714/101‑1 (MQ=255)
ggCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.cccccc < 2:4404005/101‑1 (MQ=255)
ggCGCAGCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.cccccc < 1:1754898/101‑1 (MQ=255)
ggCCCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.cccccc < 2:1436771/101‑1 (MQ=255)
cgcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCgg < 2:946482/101‑1 (MQ=255)
gcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCggg < 2:3905654/101‑1 (MQ=255)
cATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCCGGa > 2:422033/1‑101 (MQ=255)
aTCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCCGGat > 2:1787208/1‑101 (MQ=255)
tCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGata > 1:80430/1‑101 (MQ=255)
tCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGata < 2:1457478/101‑1 (MQ=255)
ccTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCgggggat > 1:1640963/1‑97 (MQ=255)
cTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATAtt > 2:1090535/1‑101 (MQ=255)
caggcgcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCCTCCGCCGGCGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATAttt < 2:616689/96‑1 (MQ=18)
cagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATg < 1:1232154/101‑1 (MQ=255)
cagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATg > 2:3530466/1‑101 (MQ=255)
agcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATgg < 1:117366/101‑1 (MQ=255)
cGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.aa < 2:1629925/101‑1 (MQ=255)
ggggCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAg > 1:2277184/1‑101 (MQ=255)
ggggCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAg > 1:4111430/1‑101 (MQ=255)
gggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGa < 1:2761632/101‑1 (MQ=255)
ggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGG.AAGAt > 1:1163249/1‑101 (MQ=255)
ggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGAt < 1:1999012/101‑1 (MQ=255)
ggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGAt > 1:4334206/1‑101 (MQ=255)
ggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.CCCTCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGAt < 2:752858/101‑1 (MQ=255)
gcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATg < 1:1570152/101‑1 (MQ=255)
gcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCCGGCTATTTTTTGG.AAGATg > 1:56399/1‑101 (MQ=21)
cgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGa < 1:1944217/101‑1 (MQ=255)
cgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGa < 1:2511831/101‑1 (MQ=255)
gggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGaa < 1:3776779/101‑1 (MQ=255)
gggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGaa < 1:3516714/101‑1 (MQ=255)
ggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGaaa > 2:681505/1‑101 (MQ=255)
ggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGaaa < 1:3150948/101‑1 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTg < 2:1980975/101‑1 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTg > 2:1070973/1‑101 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTg > 1:1403475/1‑101 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTg > 2:3435053/1‑101 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGAAATTTATTGG.AAGAAGaaaacg > 1:1604283/1‑98 (MQ=18)
ccAATGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.gg < 2:2930853/101‑1 (MQ=255)
ccAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.gg > 1:66097/1‑101 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGcc > 1:4395081/1‑101 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGcc > 2:197414/1‑101 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGcc > 2:2059384/1‑101 (MQ=255)
gCTTACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCa < 2:910693/101‑1 (MQ=255)
gCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCa < 1:1068916/101‑1 (MQ=255)
cTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCAt < 2:2530820/101‑1 (MQ=255)
cTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCAGGATATGTATGGC.AAGATGGAACTGC.GGCCTTCAt > 2:1880036/1‑101 (MQ=18)
tGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCCGGGAAATTTTTGGC.AAAAAGAAAACGC.GGCCTTCAt > 1:2399213/1‑101 (MQ=17)
gccccTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AATATGAAACTGC.GGCCTTCATCt < 2:1116824/97‑1 (MQ=18)
gACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCt < 1:732751/101‑1 (MQ=255)
gACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAAAAGAAACTGC.GGGCTTCATCt > 1:2616302/1‑101 (MQ=18)
gcGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCtt < 2:3512624/100‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTCC.CCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCtt < 1:3938117/101‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGTTGAAACTGC.GGCCTTCATCtt < 2:4459524/101‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCtt < 2:3722210/101‑1 (MQ=255)
cGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTg < 2:2338294/101‑1 (MQ=255)
cGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTg < 1:4629208/101‑1 (MQ=255)
gCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGc < 1:3065265/101‑1 (MQ=255)
tGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCTGGATTTTTATGGCTAACAGAAAACTCC.GCCCTTCACCtcaca > 1:3283882/1‑97 (MQ=9)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATa < 2:3397376/101‑1 (MQ=255)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATa > 1:2294734/1‑101 (MQ=255)
gTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATaa < 1:4223937/101‑1 (MQ=255)
cAGCCGTCGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAat < 2:3681062/101‑1 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAat < 2:4051915/101‑1 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAat < 1:3849642/101‑1 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAata > 2:2922739/1‑101 (MQ=255)
gcgggccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.g < 2:557275/100‑1 (MQ=255)
gggccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.ggg < 2:1609416/101‑1 (MQ=255)
gccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 2:416160/101‑1 (MQ=255)
gccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 2:3253867/101‑1 (MQ=255)
gccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 1:848624/101‑1 (MQ=255)
ccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTg < 2:3784874/101‑1 (MQ=255)
cgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGc > 1:663736/1‑101 (MQ=255)
acggacggggggCTCT.G.CCC.CCCGGCTTCG..CT.CCCCCCGGGATATTTGCGGC.AAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa > 2:4309734/7‑99 (MQ=2)
ggggAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCg < 2:3648148/101‑1 (MQ=255)
gggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCg > 2:2106101/1‑101 (MQ=255)
gcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCggg < 2:3891332/101‑1 (MQ=255)
gacggggggCGCT.G.CCC.CCCGGCTTCG..CT.CCCCCCGGGATATTTGCGGC.AAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaattg < 1:3012753/98‑6 (MQ=9)
gcgcT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGcc > 1:3890433/1‑101 (MQ=255)
ctgcccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCg > 1:2935175/5‑101 (MQ=255)
tgcccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGc > 1:4439373/4‑101 (MQ=255)
gcccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCt > 2:1957939/3‑101 (MQ=255)
gcccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCt < 1:1021295/99‑1 (MQ=255)
cccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTc < 2:10326/100‑1 (MQ=255)
cccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTc > 1:2136297/2‑101 (MQ=255)
ccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCa > 2:1376364/1‑101 (MQ=255)
ccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCa < 1:1724979/101‑1 (MQ=255)
cc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCaa > 2:4560387/1‑101 (MQ=255)
cc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCaa < 1:1097123/101‑1 (MQ=255)
cc.ccGGCCTGCGGGCT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCaa < 1:2431716/101‑1 (MQ=255)
c.ccGTCCTGCGGCCT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAAc < 2:909856/101‑1 (MQ=255)
ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAAcc > 2:122683/1‑101 (MQ=255)
ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAAcc < 1:4078692/101‑1 (MQ=255)
ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAAcc > 1:3580067/1‑101 (MQ=255)
ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGGGCGGGGCAGAGCCCCGCTCAAcc > 2:1020723/1‑101 (MQ=255)
|
ACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.CCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGA > NC_014034/1734752‑1734947
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|