| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,734,888 | C→G | 4.1% | intergenic (‑141/+52) | RCAP_rcc01603 ← / ← RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,734,888 | 0 | C→G | 4.1% | 10.5 ‑0.3 ‑0.0 | 194 | intergenic (‑141/+52) | RCAP_rcc01603/RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (5/3): ref base (92/94): total (97/97) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.21e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.96e-01 | ||||||||||
Only 100 of 211 total aligned reads displayed.
AAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.CCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAG > NC_014034/1734791‑1734988
|
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTg > 2:1070973/1‑101 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTg > 1:1403475/1‑101 (MQ=255)
gCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCATGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.g < 1:1763434/101‑1 (MQ=255)
gCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.g < 1:3039082/101‑1 (MQ=255)
ccAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.gg > 1:66097/1‑101 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGcc > 2:197414/1‑101 (MQ=255)
ggCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCCGGGCAATTATGGC.AAGAATAAAATGGC.GGCCtc > 1:5823/1‑100 (MQ=17)
gCTTACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCa < 2:910693/101‑1 (MQ=255)
gCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCa < 1:2282492/101‑1 (MQ=255)
cTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCAt < 2:2530820/101‑1 (MQ=255)
cTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCAGGATATGTATGGC.AAG.ATGGAACTGC.GGCCTTCAt > 2:1880036/1‑101 (MQ=18)
tGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACTCCCCCCCGGGAAATTTTTGGC.AAA.AAGAAAACGC.GGCCTTCAt > 1:2399213/1‑101 (MQ=17)
tGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCCTCAtt > 1:40369/1‑100 (MQ=255)
gccccTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAT.ATGAAACTGC.GGCCTTCATCt < 2:1116824/97‑1 (MQ=18)
gACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCt < 1:732751/101‑1 (MQ=255)
gcGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCtt < 2:3512624/100‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTCC.CCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCtt < 1:3938117/101‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.TTGAAACTGC.GGCCTTCATCtt < 2:4459524/101‑1 (MQ=255)
cGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTg < 1:4629208/101‑1 (MQ=255)
gCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGc < 2:1366481/101‑1 (MQ=255)
tGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCTGGATTTTTATGGCTAAC.AGAAAACTCC.GCCCTTCACCtcaca > 1:3283882/1‑97 (MQ=9)
tGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCa < 2:2149657/101‑1 (MQ=255)
gCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCAt < 1:1548212/101‑1 (MQ=255)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGTGAAATTTATGGC.AAG.ATGAAACTGC.GACCTTCATCTTGCCATa > 1:436418/1‑101 (MQ=17)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATa < 2:3397376/101‑1 (MQ=255)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATa > 1:474469/1‑101 (MQ=255)
gTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATaa < 1:4223937/101‑1 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAat > 2:6950/1‑101 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAat > 1:1167391/1‑101 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAat < 2:4051915/101‑1 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAata > 2:1428254/1‑101 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAata > 2:2922739/1‑101 (MQ=255)
cGACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATcc < 2:372355/101‑1 (MQ=255)
gACGGGCCGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTCCATCTTGCCATAAATATccc > 1:295962/1‑101 (MQ=255)
aCGGGCAGGGCAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.g < 1:1657182/101‑1 (MQ=255)
cgggccgggcAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.gg > 1:2105841/1‑101 (MQ=255)
tgacggacggggggCTCT.G.CCCCCCGGCTTCG..CT.CCCCCCGGGATATTTGCGGC.AAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTg > 1:2761741/9‑101 (MQ=2)
gccgggcAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 2:3253867/101‑1 (MQ=255)
gccgggcAGGAGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 2:2077344/101‑1 (MQ=255)
ccgggcAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTg < 2:3784874/101‑1 (MQ=255)
cgggcAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGc > 1:663736/1‑101 (MQ=255)
acggacggggggCTCT.G.CCCCCCGGCTTCG..CT.CCCCCCGGGATATTTGCGGC.AAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa > 2:4309734/7‑99 (MQ=2)
acggacggggggCTCT.G.CCCCCCGGCTTCG..CT.CCCCCCGGGATATTTGCGGC.AAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa < 2:4332654/95‑3 (MQ=2)
ggggAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCg < 2:3648148/101‑1 (MQ=255)
gggcAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCg > 2:2106101/1‑101 (MQ=255)
gggcAGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCg < 1:3864913/101‑1 (MQ=255)
aGGGGGGCGCT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGc < 2:1640858/101‑1 (MQ=255)
cgcT.GCCCCCCGTCCTGCGGACT.CCCCCCGGGATAGTTATAGT.AAG.CTGCAACTAG.CGCCCTCAACTTGCCCTGAATATGCC.GGGGGGTGGGGTAGAGccc > 2:4166224/1‑101 (MQ=2)
gctgccccccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGcccc < 2:3867039/96‑1 (MQ=255)
cctcccccccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAACCTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGcccc < 1:2334251/96‑1 (MQ=255)
gccccccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCt < 1:1021295/99‑1 (MQ=255)
ccccccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTc < 2:10326/100‑1 (MQ=255)
ccccccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTc > 1:2136297/2‑101 (MQ=255)
ccccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCaa < 1:1097123/101‑1 (MQ=255)
ccccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCaa > 2:4560387/1‑101 (MQ=255)
cccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAAc > 2:159375/1‑101 (MQ=255)
ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAAcc > 2:122683/1‑101 (MQ=255)
ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAAcc > 1:3580067/1‑101 (MQ=255)
gTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGa > 1:3081382/1‑101 (MQ=255)
ccTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAg > 2:2004868/1‑101 (MQ=255)
cTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGa > 2:2702641/1‑101 (MQ=255)
cTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGa < 1:1192006/101‑1 (MQ=255)
tGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGAt < 2:3719588/101‑1 (MQ=255)
gccT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACa < 2:451418/99‑1 (MQ=255)
cT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAg < 1:4407306/101‑1 (MQ=255)
ccccccGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGAt < 1:2826345/101‑1 (MQ=255)
ccccccGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGAt > 2:4093953/1‑101 (MQ=255)
cccccGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATc < 1:24507/101‑1 (MQ=255)
ccGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCcgc < 2:4373336/101‑1 (MQ=255)
ccGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCcgc < 1:3897627/101‑1 (MQ=255)
cGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCcgcg > 2:594725/1‑101 (MQ=255)
cGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCcgcg > 2:3140917/1‑101 (MQ=255)
gggATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCgg > 1:3845935/1‑101 (MQ=255)
gggATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCgg > 2:908707/1‑101 (MQ=255)
gggATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCgg > 2:4568177/1‑101 (MQ=255)
gggATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATACGCgg > 2:1275148/1‑101 (MQ=255)
gggATATTTATGGC.AAG.ATGAAACTGC.GGCCATCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCAAAGATGACAAGATCCGCgg > 1:2629682/1‑101 (MQ=255)
ggATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGc > 1:1867227/1‑101 (MQ=255)
tatTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCg > 2:1633152/1‑101 (MQ=255)
tatTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCg < 1:197689/101‑1 (MQ=255)
tttATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGt > 2:3824198/1‑101 (MQ=255)
tttATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGt > 1:912657/1‑101 (MQ=255)
ttATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCgggt > 1:975317/1‑99 (MQ=255)
tATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGttt < 1:2987816/101‑1 (MQ=255)
tATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGttt > 1:1369339/1‑101 (MQ=255)
tATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGttt > 2:3442028/1‑101 (MQ=255)
aTGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGtttt > 2:517194/1‑101 (MQ=255)
tGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTc < 2:2373514/101‑1 (MQ=255)
gC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGc > 2:4155559/1‑101 (MQ=255)
c.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCt < 1:1448679/101‑1 (MQ=255)
c.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCt > 2:4586482/1‑101 (MQ=255)
aG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtga > 1:907959/1‑101 (MQ=255)
aTGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgatg < 2:1753445/101‑1 (MQ=255)
tGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgatga > 1:4166847/1‑101 (MQ=255)
tGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgatga > 2:1486800/1‑101 (MQ=255)
gAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGGGGGGGAGAGCACCGCTCAACCGAAGACGACAAGAGCCGCGGTCCGGTTTTCGCttacagc > 2:2775348/1‑95 (MQ=25)
gAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAg < 2:2387437/101‑1 (MQ=255)
aaCTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCa < 1:1114439/101‑1 (MQ=255)
aaCTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCa < 2:663674/101‑1 (MQ=255)
cTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAg < 2:2934946/101‑1 (MQ=255)
|
AAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.CCCCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAG > NC_014034/1734791‑1734988
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|