| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,976,892 | G→C | 88.6% | intergenic (‑71/+9) | fba ← / ← gap1 | fructose‑bisphosphate aldolase/glyceraldehyde‑3‑phosphate dehydrogenase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,976,892 | 0 | G→C | 88.6% | 30.9 ‑0.6 ‑0.2 | 143 | intergenic (‑71/+9) | fba/gap1 | fructose‑bisphosphate aldolase/glyceraldehyde‑3‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): new base (92/34): ref base (11/6): total (103/40) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.66e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.04e-01 | ||||||||||
Only 100 of 156 total aligned reads displayed.
TTGCCGAAGGGTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCGGCG.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGACCAT > NC_014034/1976798‑1976990
|
gggTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGAt > 2:238087/1‑101 (MQ=255)
ggTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATc > 2:458765/1‑101 (MQ=255)
gATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGc > 2:3474290/1‑101 (MQ=255)
gATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGc > 2:2640615/1‑101 (MQ=255)
gATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGc > 2:40721/1‑101 (MQ=255)
gATCAGTCCCATTTTCTCATTTCCTTGAGTTCGCGGCTTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGCCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGc < 2:428671/101‑1 (MQ=25)
ttcggTGCCTTTTTCTCATTTCTTTGGGTGCGC.GCCTTTTTCCTGG.CC.C.AAA.ATCGG.CGGGGGGCC.GGGGGCCAC.CC.CCCCCGGC.TTTTCTCAGATCAGCt < 2:1884690/97‑1 (MQ=255)
tCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCtt > 2:683268/1‑101 (MQ=255)
aGTGCGATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGc > 2:200832/1‑101 (MQ=37)
gTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGcc > 1:1904731/1‑101 (MQ=255)
tgcttttttCTCTTTT.CTTGGGTTCGCGGCTTTTTTTGTGG.CC.C.AAA.ACCCG.GGGGGGGCG.GGGGG.CCG.CC.CCCCCCGGCTTTTCTCAGATCAGCTTGccc < 1:1884390/96‑1 (MQ=255)
tgcttttttCTCTGTCCCTTGAG.TCGGCGCCTTTTTTTTGGCCC.A.AAA.TCCGC.GGGGGGCCG.GGGGG.CGG.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGccc < 1:669645/96‑1 (MQ=255)
tGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGccc < 2:2823605/101‑1 (MQ=255)
cctttttCTCAGTTCCTTGGGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TCCGC.CGGGGGTCG.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCAt < 2:2677619/98‑1 (MQ=25)
aTTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCg > 1:969745/1‑101 (MQ=255)
aTTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCg > 2:751278/1‑101 (MQ=255)
tttCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTGGG.CC.A.AAA.TCCGC.GGGGGGTCC.GGGGG.CAG.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGcc < 1:2970811/101‑1 (MQ=25)
tcccAGTTCCTTGAGTCCGC.GCCTTTTTTTTGG.GC.GAAAA.TCCGC.GGGGGGTCG.GGGGG.CGG.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCAc < 1:4473853/98‑1 (MQ=255)
cAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCAcggc > 2:4173672/1‑101 (MQ=255)
aGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCAcggcg > 1:3703873/1‑101 (MQ=255)
aGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCACATCGCCAcggcg > 1:3108311/1‑101 (MQ=37)
tctttGGGTTCGC.GCCTTTTTTTTGG.CCAA.AAA.CCCGC.GGGAGGCCC.GGGGG.CCC.CC.CCCCGGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTa < 1:3426563/98‑1 (MQ=9)
tCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTa > 1:247143/1‑101 (MQ=255)
ccTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTAt > 1:1723324/1‑101 (MQ=255)
tttGTGTGCGCGG.CTTTTTTTTGG.CC...AAA.AACGCGCGGGGGGCCGGGGGG.CGG.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATc < 2:3367850/100‑1 (MQ=9)
ctggggTTCGGGGCTTTTTTCTGGG.CC.G.AAA.TCCGC.GGGGGGTCG.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATc < 2:2561886/96‑1 (MQ=21)
cTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATc > 2:2990/1‑101 (MQ=255)
cTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATc > 1:78589/1‑101 (MQ=255)
cTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATc > 1:3637101/1‑101 (MQ=255)
ttggttccgcgG.CTTTTTTTTTG.CC.A.AAA.AACGG.CGGGGGGCC.GGGGG.CCGCCC.CCCCGGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCg < 2:1119267/94‑1 (MQ=12)
ttGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCg > 1:1990047/1‑101 (MQ=255)
tGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCgg > 1:3866042/1‑101 (MQ=255)
tGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCgg > 1:2187997/1‑101 (MQ=255)
aGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGcc > 1:49283/1‑101 (MQ=255)
gTTCGCGGCCTTTTTCTTNG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CGC.CG.CCNCCGGC.TTTTCTCAGATCNNNNNGCCNCTCGNCANNTCCGCCTCGGCCa > 1:2847708/1‑101 (MQ=16)
cgcgCCCTTTTCCTGGG.CG.A.AAA.CGCGC.GGGGGGCGC.GGGCG.CCC.CC.CCCCGGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGc < 1:4577346/101‑1 (MQ=12)
gcgGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGca > 2:4577047/1‑100 (MQ=255)
gcgGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCg > 2:1511136/1‑101 (MQ=255)
gcgGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCg > 2:318033/1‑101 (MQ=255)
ggccttttttCTGGG.CC.A.AAA.TCCGC.GGGGGGCCG.GGGGG.CGC.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCgg < 2:46105/96‑1 (MQ=16)
cgGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCgg > 2:2035333/1‑101 (MQ=255)
gtcTTTTTCTGGG.CC.G.AAA.TCCGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTAAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGtt < 2:3794710/99‑1 (MQ=25)
gcttttttCTTGT.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGtt < 2:779238/98‑1 (MQ=37)
gCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGtt < 2:2233969/101‑1 (MQ=255)
gCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGtt > 2:4215460/1‑101 (MQ=255)
ccTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTc > 2:802401/1‑101 (MQ=255)
cTTTTTTTTGG.CC.A.AAA.ACCCG.CGGGGGGCG.GGGGGCCGG.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTc < 1:4173960/101‑1 (MQ=12)
tttttCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCCTGCGGTTCga > 2:2622863/1‑101 (MQ=37)
tttttCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCga > 2:462207/1‑101 (MQ=255)
tttttCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGGTCga > 2:3901438/1‑101 (MQ=37)
tttttCGTTG.CC.C.AAA.ATGGC.CGGGGGGCCGGGGGG.CCG.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCg < 1:661447/101‑1 (MQ=12)
ttttCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCgag > 2:4440804/1‑101 (MQ=255)
tttCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCgaga > 1:915922/1‑101 (MQ=255)
cTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGc > 1:3235853/1‑101 (MQ=255)
tGG.CC.G.AAA.TACGC.CGGGGGGCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCACTGCCACGGCGGTATCGGCCATGCGGTTCGGGAAGccc > 2:3657035/1‑101 (MQ=25)
gg.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGcccc > 1:3297752/1‑101 (MQ=255)
g.CC.G.AAATTCCGC.GGGGGGTCG.GGGGG.CCC.CC.CCCCGGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGcccc < 1:4410992/101‑1 (MQ=18)
cc.G.AAA.T.CCC.CGGGGGGCC.GGGGG.CCGCCC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcat < 2:3553793/101‑1 (MQ=17)
c.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcatt > 2:1902401/1‑101 (MQ=255)
c.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcatt > 1:1800480/1‑101 (MQ=255)
c.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcatt > 2:1697242/1‑101 (MQ=255)
g.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcattc > 2:3759191/1‑101 (MQ=255)
caaaa.TCCGC.GGGGGGCCG.GGGGG.CGC.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcatt < 1:2838795/99‑1 (MQ=17)
aa.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcattcat > 1:4513782/1‑101 (MQ=255)
gaaatcggcGGGGGGCC.GGGGGCCAG.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcattc < 1:2030090/93‑1 (MQ=17)
attccGC.GGGGGGCCG.GGGGG.CAC.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcattcat < 2:2146246/97‑1 (MQ=17)
atccGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcattcatt < 2:2765551/98‑1 (MQ=21)
aagccggggggggCCG.GGGGG.CCG.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcattcat < 1:2573422/93‑1 (MQ=17)
gC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCa > 1:4588877/1‑101 (MQ=255)
gC.CGGGGGTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCa > 2:2994272/1‑101 (MQ=255)
gcggggggTCC.GGGGG.CAC.CC.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCa < 2:229465/98‑1 (MQ=18)
c.cGGTGGGCC.GGGGG.CGG.CG.CCCCCGGC.TTTTCTCAGATTAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCAt < 1:2116058/101‑1 (MQ=18)
cGGGGGTCC.GGGGG.CGG.CT.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATa < 1:1567712/101‑1 (MQ=18)
gggggTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATAc > 1:233410/1‑101 (MQ=255)
gggggTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATAc > 1:2757593/1‑101 (MQ=255)
gggggTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATAc > 2:1136535/1‑101 (MQ=255)
gggggcggggggg.CCC.CC.CCCCGGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATAc < 1:49088/93‑1 (MQ=17)
ggggTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATAcc > 1:3408921/1‑101 (MQ=255)
gggTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCa > 1:4266804/1‑101 (MQ=255)
tctc.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACg < 1:3949406/98‑1 (MQ=21)
gTCC.GGGGG.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACg > 2:387712/1‑101 (MQ=255)
tCC.GGGGG.CAC.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGa < 2:1295628/101‑1 (MQ=21)
c.GGGGG.CAG.CGCCCCCGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGaga > 2:3949121/1‑99 (MQ=18)
ggggg.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAg > 2:1494692/1‑101 (MQ=255)
gggg.CAG.CGCCCCCGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAgg > 2:3508750/1‑101 (MQ=255)
gggg.CAG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAgg > 1:2157957/1‑101 (MQ=255)
gtcgg.cg.cCCCTGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGAt < 1:779291/97‑1 (MQ=18)
aG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCg > 2:3263172/1‑101 (MQ=255)
aG.CG.CCCCCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCg > 2:892103/1‑101 (MQ=255)
gcccccccGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCgg < 2:247119/97‑1 (MQ=255)
cgcccccGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGa > 2:921160/4‑101 (MQ=255)
tcccccGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAc < 1:239006/99‑1 (MQ=255)
gcccccGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAc > 1:705876/3‑101 (MQ=255)
ccccccGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAc < 1:1640859/99‑1 (MQ=255)
cccccGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAcc < 1:2992/100‑1 (MQ=255)
cccccGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAcc > 2:1818907/2‑101 (MQ=255)
cccccGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAca > 2:238982/2‑100 (MQ=255)
ccccGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGACCa > 1:2512365/1‑101 (MQ=255)
cccGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGACCAt > 1:2653671/1‑101 (MQ=255)
cccGGC..TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGACCAt < 2:836146/101‑1 (MQ=255)
|
TTGCCGAAGGGTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CC.G.AAA.TACGC.CGGGGGTCC.GGGGG.CAG.CG.CCCCGGCG.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGACCAT > NC_014034/1976798‑1976990
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 28 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|