Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,040,375 | C→G | 5.0% | intergenic (‑123/‑265) | RCAP_rcc01888 ← / → RCAP_rcc01889 | hypothetical protein/hypothetical protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,040,375 | 0 | C→G | 5.0% | 18.8 ‑2.1 ‑0.5 | 219 | intergenic (‑123/‑265) | RCAP_rcc01888/RCAP_rcc01889 | hypothetical protein/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (3/8): ref base (110/98): total (113/106) | ||||||||||
Fisher's exact test strand distribution p-value = 1.26e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.98e-01 |
Only 100 of 237 total aligned reads displayed.
CCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.G.C.GCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCATAAATC > NC_014034/2040276‑2040476
|
ccGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgg > 1:970627/1‑101 (MQ=255)
cGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGggg < 1:2109000/101‑1 (MQ=255)
ggCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgggc < 1:3516490/101‑2 (MQ=255)
ggCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgggc > 2:2640583/1‑100 (MQ=255)
gCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCg < 2:1074891/101‑1 (MQ=255)
gCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCg > 1:182123/1‑101 (MQ=255)
tctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGAt < 1:822349/101‑1 (MQ=255)
ctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATg > 2:240632/1‑101 (MQ=255)
tGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATgg < 2:4565848/101‑1 (MQ=255)
gggTTGGGATTGAAAAAAACCGGACCGGCCAGGGGCCGGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGc < 1:321974/101‑1 (MQ=255)
gggTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGc > 1:872245/1‑101 (MQ=255)
gggTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGc > 2:637766/1‑101 (MQ=255)
gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt < 1:1861687/101‑1 (MQ=255)
gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt > 2:1148164/1‑101 (MQ=255)
gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt > 1:2314277/1‑101 (MQ=255)
tGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc > 1:3375293/1‑101 (MQ=255)
tGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc > 2:3303674/1‑101 (MQ=255)
gggATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcg < 2:161566/101‑1 (MQ=255)
ggATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcgc > 2:387385/1‑101 (MQ=255)
aTGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCgg > 1:2086781/1‑101 (MQ=255)
aTGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCgg > 1:143255/1‑101 (MQ=255)
tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCgga > 2:1901418/1‑100 (MQ=255)
tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGt < 1:4463994/101‑1 (MQ=255)
aaaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATg > 1:3640039/1‑101 (MQ=255)
aaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATgg < 1:2586130/101‑1 (MQ=255)
aaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATgg > 2:3534819/1‑101 (MQ=255)
aaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgcg < 2:1795151/101‑1 (MQ=255)
aCCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGt > 1:1384313/1‑101 (MQ=255)
aaCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaa > 2:1976288/1‑101 (MQ=255)
aCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaaa < 1:4045580/101‑1 (MQ=255)
aCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaaa < 1:3125263/101‑1 (MQ=255)
aCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaaa > 2:3943972/1‑101 (MQ=255)
ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACTCGGTATGGCGCGTGCCAAAGa < 1:2640768/101‑1 (MQ=255)
ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGa < 1:4078183/101‑1 (MQ=255)
ccAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcg < 1:2913220/101‑1 (MQ=255)
cAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcgg > 2:4300142/1‑101 (MQ=255)
aGGGGCCAGACGCAGGCGT.GGGGGATCCGGTAGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcggc < 1:3452436/101‑1 (MQ=255)
ggCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACggcggc > 1:1500982/1‑101 (MQ=255)
gCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGcc < 2:4113395/101‑1 (MQ=255)
ccAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCg > 2:4600648/1‑101 (MQ=255)
aGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGGGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGAGCCAAAGACGGCGGACGCa > 1:2245600/1‑101 (MQ=255)
gACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGGGGGCGCaa > 1:1223765/1‑101 (MQ=255)
gACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaa < 1:4556809/101‑1 (MQ=255)
aCGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaaa < 1:1890184/101‑1 (MQ=255)
aCGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaaa < 1:4531132/101‑1 (MQ=255)
gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAg.g > 2:3208704/1‑101 (MQ=255)
gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAg.g > 1:1054889/1‑101 (MQ=255)
aGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.cc > 2:3069957/1‑100 (MQ=255)
aGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.cc < 1:4600948/101‑2 (MQ=255)
ggCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccg < 1:3358535/101‑3 (MQ=255)
cgtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccgcg > 1:1103782/4‑97 (MQ=255)
cgtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccgcg > 2:1984848/4‑97 (MQ=255)
gtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccgcgc > 1:4432859/3‑96 (MQ=255)
gtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccgcgc > 1:2166633/3‑96 (MQ=255)
gtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAAG.GAc.gcgc > 2:1369128/3‑101 (MQ=255)
tgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGcc > 2:3695835/2‑101 (MQ=255)
tgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGcc < 2:4432564/100‑1 (MQ=255)
gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATa < 2:793298/101‑1 (MQ=255)
gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATa > 2:2462405/1‑101 (MQ=255)
gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATa < 1:3079520/101‑1 (MQ=255)
tCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTg < 1:730676/101‑1 (MQ=255)
tCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTg > 2:2824707/1‑101 (MQ=255)
ggTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGc > 2:960365/1‑101 (MQ=255)
ggTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGc > 1:2525179/1‑101 (MQ=255)
gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAc > 2:489047/1‑101 (MQ=255)
gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAc > 2:3833005/1‑101 (MQ=255)
gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GAGCCATAAGTGAGCCCAc > 2:4192045/1‑101 (MQ=255)
aaGGTCAGACGTGGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAcc > 1:2533266/1‑101 (MQ=255)
aGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAccg < 1:2765255/101‑2 (MQ=255)
ggTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAccgg > 2:1462158/1‑99 (MQ=255)
ggTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAccgg < 1:1706514/101‑3 (MQ=255)
cAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTc < 1:1031136/101‑1 (MQ=255)
cAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTc < 2:2245438/101‑1 (MQ=255)
cAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTc > 1:987083/1‑101 (MQ=255)
aGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCg > 1:3929871/1‑101 (MQ=255)
gACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCgg < 1:1539205/101‑1 (MQ=255)
gACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCgg > 1:1591345/1‑101 (MQ=255)
gACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCgg > 2:3429405/1‑101 (MQ=255)
cGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAg < 1:1976423/101‑1 (MQ=255)
cGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAg < 2:4530675/101‑1 (MQ=255)
gTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGGGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAgg < 2:574212/101‑1 (MQ=255)
ttGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggt > 1:2956119/1‑100 (MQ=255)
tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggtt < 2:2086641/101‑3 (MQ=255)
tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGGATGGCGAGTGCCAAAGACGGAGGCCCCAAAGCC.C.GCGCCATAAGTGAGCGCA.CCGATTCGTAGGGt > 2:1532168/1‑101 (MQ=255)
gtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttg < 2:3488367/101‑4 (MQ=255)
tgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGTGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttgg > 1:3970804/1‑97 (MQ=255)
tgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttgg > 1:2717490/1‑97 (MQ=255)
cAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGAt < 1:2296079/101‑1 (MQ=255)
aaaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.G.CGGCGCCATAAGGGAGCCCA.CCGGTTCGGA.GGTTGGATg > 1:2204472/1‑101 (MQ=255)
aaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGc > 2:3000374/1‑101 (MQ=255)
aaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGNTTCGGA.GGTTGGATGCa > 2:124206/1‑101 (MQ=255)
aaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCa < 2:1384218/101‑1 (MQ=255)
agcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCAt > 2:2125524/5‑101 (MQ=255)
agcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCAt > 1:3158010/5‑101 (MQ=255)
agcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCAt > 2:1741567/5‑101 (MQ=255)
caccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATaa < 1:4283886/99‑1 (MQ=255)
ccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTTGATGCATAAAt < 2:2287996/101‑1 (MQ=255)
ccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAAt < 1:2362564/101‑1 (MQ=255)
cGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATc < 2:1050530/101‑1 (MQ=255)
cGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATc < 2:2041888/101‑1 (MQ=255)
|
CCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.G.C.GCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCATAAATC > NC_014034/2040276‑2040476
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 21 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|