Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,040,375 C→G 5.0% intergenic (‑123/‑265) RCAP_rcc01888 ← / → RCAP_rcc01889 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,040,3750C→G 5.0% 18.8 ‑2.1 ‑0.5219intergenic (‑123/‑265)RCAP_rcc01888/RCAP_rcc01889hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (3/8):  ref base (110/98):  total (113/106)
Fisher's exact test strand distribution p-value = 1.26e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.98e-01

Only 100 of 237 total aligned reads displayed.

CCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.G.C.GCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCATAAATC  >  NC_014034/2040276‑2040476
                                                                                                   |                                                                                                        
ccGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgg                                                                                                        >  1:970627/1‑101 (MQ=255)
 cGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGggg                                                                                                       <  1:2109000/101‑1 (MQ=255)
  ggCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgggc                                                                                                      <  1:3516490/101‑2 (MQ=255)
  ggCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgggc                                                                                                      >  2:2640583/1‑100 (MQ=255)
   gCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCg                                                                                                    <  2:1074891/101‑1 (MQ=255)
   gCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCg                                                                                                    >  1:182123/1‑101 (MQ=255)
      tctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGAt                                                                                                 <  1:822349/101‑1 (MQ=255)
       ctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATg                                                                                                >  2:240632/1‑101 (MQ=255)
        tGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATgg                                                                                               <  2:4565848/101‑1 (MQ=255)
         gggTTGGGATTGAAAAAAACCGGACCGGCCAGGGGCCGGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGc                                                                                              <  1:321974/101‑1 (MQ=255)
         gggTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGc                                                                                              >  1:872245/1‑101 (MQ=255)
         gggTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGc                                                                                              >  2:637766/1‑101 (MQ=255)
           gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                                                                            <  1:1861687/101‑1 (MQ=255)
           gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                                                                            >  2:1148164/1‑101 (MQ=255)
           gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                                                                            >  1:2314277/1‑101 (MQ=255)
             tGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc                                                                                          >  1:3375293/1‑101 (MQ=255)
             tGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc                                                                                          >  2:3303674/1‑101 (MQ=255)
              gggATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcg                                                                                         <  2:161566/101‑1 (MQ=255)
               ggATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcgc                                                                                        >  2:387385/1‑101 (MQ=255)
                 aTGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCgg                                                                                      >  1:2086781/1‑101 (MQ=255)
                 aTGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCgg                                                                                      >  1:143255/1‑101 (MQ=255)
                  tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCgga                                                                                     >  2:1901418/1‑100 (MQ=255)
                  tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGt                                                                                     <  1:4463994/101‑1 (MQ=255)
                     aaaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATg                                                                                  >  1:3640039/1‑101 (MQ=255)
                      aaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATgg                                                                                 <  1:2586130/101‑1 (MQ=255)
                      aaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATgg                                                                                 >  2:3534819/1‑101 (MQ=255)
                        aaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgcg                                                                               <  2:1795151/101‑1 (MQ=255)
                           aCCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGt                                                                            >  1:1384313/1‑101 (MQ=255)
                                aaCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaa                                                                       >  2:1976288/1‑101 (MQ=255)
                                 aCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaaa                                                                      <  1:4045580/101‑1 (MQ=255)
                                 aCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaaa                                                                      <  1:3125263/101‑1 (MQ=255)
                                 aCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaaa                                                                      >  2:3943972/1‑101 (MQ=255)
                                   ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACTCGGTATGGCGCGTGCCAAAGa                                                                    <  1:2640768/101‑1 (MQ=255)
                                   ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGa                                                                    <  1:4078183/101‑1 (MQ=255)
                                     ccAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcg                                                                  <  1:2913220/101‑1 (MQ=255)
                                      cAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcgg                                                                 >  2:4300142/1‑101 (MQ=255)
                                       aGGGGCCAGACGCAGGCGT.GGGGGATCCGGTAGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcggc                                                                <  1:3452436/101‑1 (MQ=255)
                                          ggCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACggcggc                                                             >  1:1500982/1‑101 (MQ=255)
                                           gCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGcc                                                            <  2:4113395/101‑1 (MQ=255)
                                            ccAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCg                                                           >  2:4600648/1‑101 (MQ=255)
                                              aGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGGGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGAGCCAAAGACGGCGGACGCa                                                         >  1:2245600/1‑101 (MQ=255)
                                               gACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGGGGGCGCaa                                                        >  1:1223765/1‑101 (MQ=255)
                                               gACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaa                                                        <  1:4556809/101‑1 (MQ=255)
                                                aCGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaaa                                                       <  1:1890184/101‑1 (MQ=255)
                                                aCGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaaa                                                       <  1:4531132/101‑1 (MQ=255)
                                                  gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAg.g                                                    >  2:3208704/1‑101 (MQ=255)
                                                  gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAg.g                                                    >  1:1054889/1‑101 (MQ=255)
                                                    aGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.cc                                                 >  2:3069957/1‑100 (MQ=255)
                                                    aGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.cc                                                 <  1:4600948/101‑2 (MQ=255)
                                                     ggCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccg                                                <  1:3358535/101‑3 (MQ=255)
                                                        cgtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccgcg                                              >  1:1103782/4‑97 (MQ=255)
                                                        cgtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccgcg                                              >  2:1984848/4‑97 (MQ=255)
                                                         gtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccgcgc                                             >  1:4432859/3‑96 (MQ=255)
                                                         gtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccgcgc                                             >  1:2166633/3‑96 (MQ=255)
                                                         gtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAAG.GAc.gcgc                                             >  2:1369128/3‑101 (MQ=255)
                                                          tgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGcc                                            >  2:3695835/2‑101 (MQ=255)
                                                          tgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGcc                                            <  2:4432564/100‑1 (MQ=255)
                                                             gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATa                                         <  2:793298/101‑1 (MQ=255)
                                                             gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATa                                         >  2:2462405/1‑101 (MQ=255)
                                                             gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATa                                         <  1:3079520/101‑1 (MQ=255)
                                                                 tCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTg                                     <  1:730676/101‑1 (MQ=255)
                                                                 tCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTg                                     >  2:2824707/1‑101 (MQ=255)
                                                                    ggTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGc                                  >  2:960365/1‑101 (MQ=255)
                                                                    ggTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGc                                  >  1:2525179/1‑101 (MQ=255)
                                                                        gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAc                              >  2:489047/1‑101 (MQ=255)
                                                                        gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAc                              >  2:3833005/1‑101 (MQ=255)
                                                                        gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GAGCCATAAGTGAGCCCAc                              >  2:4192045/1‑101 (MQ=255)
                                                                         aaGGTCAGACGTGGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAcc                             >  1:2533266/1‑101 (MQ=255)
                                                                          aGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAccg                            <  1:2765255/101‑2 (MQ=255)
                                                                           ggTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAccgg                           >  2:1462158/1‑99 (MQ=255)
                                                                           ggTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCAccgg                           <  1:1706514/101‑3 (MQ=255)
                                                                              cAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTc                       <  1:1031136/101‑1 (MQ=255)
                                                                              cAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTc                       <  2:2245438/101‑1 (MQ=255)
                                                                              cAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTc                       >  1:987083/1‑101 (MQ=255)
                                                                               aGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCg                      >  1:3929871/1‑101 (MQ=255)
                                                                                gACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCgg                     <  1:1539205/101‑1 (MQ=255)
                                                                                gACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCgg                     >  1:1591345/1‑101 (MQ=255)
                                                                                gACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCgg                     >  2:3429405/1‑101 (MQ=255)
                                                                                  cGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAg                   <  1:1976423/101‑1 (MQ=255)
                                                                                  cGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAg                   <  2:4530675/101‑1 (MQ=255)
                                                                                   gTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGGGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAgg                  <  2:574212/101‑1 (MQ=255)
                                                                                    ttGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggt                 >  1:2956119/1‑100 (MQ=255)
                                                                                     tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggtt                <  2:2086641/101‑3 (MQ=255)
                                                                                     tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGGATGGCGAGTGCCAAAGACGGAGGCCCCAAAGCC.C.GCGCCATAAGTGAGCGCA.CCGATTCGTAGGGt                >  2:1532168/1‑101 (MQ=255)
                                                                                      gtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttg               <  2:3488367/101‑4 (MQ=255)
                                                                                       tgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGTGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttgg              >  1:3970804/1‑97 (MQ=255)
                                                                                       tgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttgg              >  1:2717490/1‑97 (MQ=255)
                                                                                         cAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGAt           <  1:2296079/101‑1 (MQ=255)
                                                                                          aaaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.G.CGGCGCCATAAGGGAGCCCA.CCGGTTCGGA.GGTTGGATg          >  1:2204472/1‑101 (MQ=255)
                                                                                           aaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGc         >  2:3000374/1‑101 (MQ=255)
                                                                                            aaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGNTTCGGA.GGTTGGATGCa        >  2:124206/1‑101 (MQ=255)
                                                                                            aaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCa        <  2:1384218/101‑1 (MQ=255)
                                                                                              agcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCAt       >  2:2125524/5‑101 (MQ=255)
                                                                                              agcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCAt       >  1:3158010/5‑101 (MQ=255)
                                                                                              agcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCAt       >  2:1741567/5‑101 (MQ=255)
                                                                                                caccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATaa     <  1:4283886/99‑1 (MQ=255)
                                                                                                  ccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTTGATGCATAAAt   <  2:2287996/101‑1 (MQ=255)
                                                                                                  ccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAAt   <  1:2362564/101‑1 (MQ=255)
                                                                                                   cGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATc  <  2:1050530/101‑1 (MQ=255)
                                                                                                   cGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATc  <  2:2041888/101‑1 (MQ=255)
                                                                                                   |                                                                                                        
CCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.G.C.GCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCATAAATC  >  NC_014034/2040276‑2040476

Base quality scores:  ATCG  < 3 ≤  ATCG  < 21 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG