Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,526,995	A→G	100%	P74P (CCT→CCC)	RCAP_rcc02356 ←	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,526,995	0	A→G	100.0%	30.9	8	P74P (CCT→CCC)	RCAP_rcc02356	hypothetical protein
Reads supporting (aligned to +/- strand):  new base (3/5):  ref base (0/0):  total (3/5)

GGTTCGGGTTTCGCGGGCGGCTCGGTCGCAGGCGCGGCAACGGCGGGCGGCTCGGCCCGGGGCGCGGGCGCCGAAGCCGCGGGCCGTTCCCGGGGCGCAGGCGGTGCGGCAGGCGGGGGCTCGGCCGCGGGGCGGGCGACGCCCGCGGCTTCGGGCAGCGCCACGGCCTGCGCCGGGGCGGGATCGGCGG  >  NC_014034/2526897‑2527086                                                                                                   |                                                                                            ggtgcgggtgTCGGGGGCGGCCGGGTCGCAGGCGCGGCACCGGCGGGCGGCTCGGCCGGGGGCGCGGGCGCCGAAGCCGCGGGCCGTTCCCGGGGCGCGgg                                                                                           <  2:1133102/101‑1 (MQ=255)     ggggttTCGCGGGCGGCTGGGTCGCGGGCGCGGCAAGGGCGGGCGGCTCGGCCCGGGGCGCGGGCGCCGAAGCCGCGGGCCGTTCCCGGGGCGCGGGCGGt                                                                                       <  1:392289/100‑1 (MQ=255)     cgggttGCGCGGGCGGCTCGGGCGCGGGCGCGGCAACGGCGGGTGGCCCGGCCCGGGCCGCGGGCGCCAAAGCCGCGGGCCGTTCCCGGGGCGCGGGCGGt                                                                                       <  1:428015/101‑1 (MQ=255)        gttTCGCGGGCGGCTCGGTCGCAGGCGCGGCAACGGCGGGCGGCTCGGCCCGGGGCGCGGGCGCCGAAGCCGCGGGCCGTTCCCGGGGCGCGGGCGGTGCg                                                                                    <  2:278227/101‑1 (MQ=255)                                                                                     cGTTCCCGGGGCGCGGGCGGTGCGGCGGGCGGGGGCTCGGCCGCGGGGCGGGGGACGCCCGCGGCTTCGGGGAGGGGCCCGGGCTGCGCCGGGGGgggggc       >  1:3916962/1‑98 (MQ=255)                                                                                      gTTCCCGGGGCGCGGGCGGTGCGGCGGGCGGGGGCTCGGCCGCGGGGCGGGCGACGCCCGCGGCTTCGGGCAGCGCCACGGCCTGCGCCGGGGCGGGATcg      <  2:3916677/101‑1 (MQ=255)                                                                                         cccGGGGCGCGGGCGGTGCGGCGGGCGGGGGCTCGGCCGCGGGGCGGGCGACGCCCGGGGCTTCGGGCGGCGCCACGGCCTGCGCCGGGGCGGGaggcggc   >  2:1943524/1‑95 (MQ=255)                                                                                          ccGGGGCGCGGGCGGTGCGGCGGGCGGGGGCTCGGCCGCGGGGCGGGGGACCCCCCCGGCTTCGGGGCGCCCCCCCGGCCGCGCCCGGGGgggggcggggg  >  1:335621/1‑93 (MQ=255)                                                                                                   |                                                                                            GGTTCGGGTTTCGCGGGCGGCTCGGTCGCAGGCGCGGCAACGGCGGGCGGCTCGGCCCGGGGCGCGGGCGCCGAAGCCGCGGGCCGTTCCCGGGGCGCAGGCGGTGCGGCAGGCGGGGGCTCGGCCGCGGGGCGGGCGACGCCCGCGGCTTCGGGCAGCGCCACGGCCTGCGCCGGGGCGGGATCGGCGG  >  NC_014034/2526897‑2527086 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 20 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG