| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,640,182 | A→G | 24.1% | intergenic (‑158/+118) | thrS ← / ← RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,640,182 | 0 | A→G | 24.1% | 83.3 ‑1.6 ‑0.0 | 133 | intergenic (‑158/+118) | thrS/RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (15/17): ref base (34/66): total (50/83) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.11e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.81e-01 | ||||||||||
Only 100 of 147 total aligned reads displayed.
GGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.G.C.TTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTT > NC_014034/2640083‑2640283
|
gggTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGa < 2:1414109/101‑1 (MQ=255)
gTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAgg < 2:3356069/101‑1 (MQ=255)
gTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAgg < 2:2171866/101‑1 (MQ=255)
gCGACGCGGCGGGAGGCGTGTCAACCGGGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTAtt < 1:1434330/101‑1 (MQ=25)
gCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTAtt < 2:756326/101‑1 (MQ=255)
cggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTTGG.G.C.TTCGGCCCATTCACCCCCCCAGGGATTTTGaggaag > 2:3682733/1‑96 (MQ=25)
ggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGa < 1:345314/101‑1 (MQ=37)
gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt < 2:3801667/101‑1 (MQ=37)
gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt < 1:1820549/101‑1 (MQ=37)
cAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATg < 2:1805999/101‑1 (MQ=37)
aGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGa < 2:2367902/101‑1 (MQ=37)
aGGCGTATCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCGCCCCT.CTT.G.GCC.TTCGGCCATTTCACCCCCCGAGGTACTTGGAGCAAGACGa < 1:2659316/101‑1 (MQ=25)
ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaa < 1:2184471/101‑1 (MQ=25)
ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCC.CTT.G.G.CGCTTGGGCCATTTACCCCCCCAGGTATTTGGAGGAAGATGaa > 1:2089534/1‑101 (MQ=255)
gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaa < 1:1897055/101‑1 (MQ=25)
cGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGGGCTGCCCCCCT.CTTCT.C.C.TTCGGCCAATTCACCCCCCCCGGTATTTTGAGCAAGATGaaaa > 2:1682965/1‑101 (MQ=25)
gtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaagacc < 1:1109101/101‑5 (MQ=25)
catccGTGGCGCTTTTGCGCACGCCATATCGGGGCGCAGCGCCCCT.CTT.GCA.C.TTAGGCCAATTCGCCCCCCGAGGTATTTGGAGCAAGATGaaatgccat < 2:2492458/98‑7 (MQ=255)
aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg < 2:355009/101‑1 (MQ=21)
ccGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg..gg < 1:401648/101‑1 (MQ=25)
tGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTc < 2:553602/101‑1 (MQ=21)
gcgcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCAt < 2:898430/101‑1 (MQ=25)
cTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCtt < 1:3304586/101‑1 (MQ=21)
ttttGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTg < 2:2517352/101‑1 (MQ=25)
gcgcAGGCAAAAGGGGGGCGCTGCCCCCCT.CTTAG.C.C.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTc < 1:4563587/101‑1 (MQ=25)
gcgcAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTc < 1:2311517/101‑1 (MQ=21)
cgcAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCa < 2:3073057/101‑1 (MQ=25)
gcAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCaa < 2:843951/101‑1 (MQ=25)
gccccgaaaAGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAat < 2:2641040/95‑1 (MQ=14)
agccAAAAGGGGGCCGCTGCCCCCCT.CTT.G.GTC.TTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAat < 2:746158/98‑1 (MQ=25)
cgaaaAGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATcc > 1:1204884/3‑101 (MQ=17)
cgaaaAGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATcc < 2:575675/99‑1 (MQ=17)
cgaaaAGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATcc < 1:4234149/99‑1 (MQ=17)
cgaaaAGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATcc > 2:4119652/3‑101 (MQ=17)
aaaGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATccc < 2:3189647/101‑1 (MQ=21)
aaaGGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATccc < 1:518442/101‑1 (MQ=25)
aaaGGGGGGC.CCGCCCCCCTCCTT.G.G.C.CTCCGGCAAATCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCg < 1:3006725/101‑1 (MQ=21)
aaaAGGGGGCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCg < 2:2748614/101‑1 (MQ=17)
agggggCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggg > 2:1578326/2‑101 (MQ=18)
agggggCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggg > 1:1356112/2‑101 (MQ=18)
gggggCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCgggg < 2:1352989/101‑1 (MQ=25)
gggggCGCTG.CCCCCT.CTT.G.GCC.TTTGGCCAATTC.ACCCCTGGGATATTTCGGGCAAGATGAA...ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggggg < 2:2120767/101‑1 (MQ=2)
gggCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACGCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCgggggg < 2:2321714/101‑1 (MQ=25)
gggCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtg > 2:3699403/1‑99 (MQ=18)
gggCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtg > 2:4392741/1‑99 (MQ=18)
gggCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtg > 1:4408096/1‑99 (MQ=18)
gggCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCgggggg > 2:2721403/1‑101 (MQ=25)
ggCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtga < 1:4092162/101‑4 (MQ=21)
ggCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGGGAAAGGA.TGGG..GGTT.ATCTTGCCCCAAATATCCCggggggga > 2:2151925/1‑99 (MQ=18)
ggCGCTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGa < 2:1026362/101‑1 (MQ=25)
gccgcTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtga < 1:1084325/99‑4 (MQ=21)
gcgcTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtgag < 1:4293630/101‑5 (MQ=21)
cgcTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCGCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtgagg < 2:3939473/101‑6 (MQ=21)
cgcTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtgagg < 2:240521/101‑6 (MQ=21)
cgcTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtgagg < 2:2002466/101‑6 (MQ=21)
cgcTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtgagg > 2:1877863/1‑96 (MQ=21)
gcTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtgaggc > 1:3459872/1‑95 (MQ=21)
ttGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTcc < 1:2032567/100‑1 (MQ=25)
cTGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtgaggcg > 1:2889601/1‑94 (MQ=25)
tGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGCGGTATTTTGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCCAATATCCCGGGGGGGGGCCt > 2:1749875/1‑101 (MQ=21)
tGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTcca > 2:2032427/1‑100 (MQ=25)
tGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt < 1:3683008/101‑1 (MQ=25)
tGCCCCCCT.CTT.G.GCC.TTCGGCCAATTCACCCCCCCGGAGATTTGCGGCAAGGTGAAAGGA..TGG..GGTATATCTTGCCCCCAATATCCCgagggtgcggcga > 2:317634/1‑93 (MQ=18)
ccccccT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGa > 2:1899673/1‑101 (MQ=25)
ccccccT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGa > 2:1541300/1‑101 (MQ=25)
cccccT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa > 1:1261680/1‑101 (MQ=25)
cccT.CTT.G.GCC.TTCGGTCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGTCTCAAATATCCCGGGGGGAGTCCTGAAAg < 1:3644658/101‑1 (MQ=25)
cccT.CTT.G.GAC.TTCGGCCAATTCGCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg < 1:2032281/101‑1 (MQ=37)
ccT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg < 1:1402267/101‑1 (MQ=37)
ccT.CTT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg > 1:462203/1‑101 (MQ=37)
ct.ctT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa > 2:3327683/1‑101 (MQ=37)
ct.ctT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa > 1:3527331/1‑101 (MQ=37)
t.ctT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc < 1:2882076/101‑1 (MQ=37)
t.ctT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc < 1:1242583/101‑1 (MQ=37)
tggcc.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 2:1307922/5‑101 (MQ=37)
tCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag < 1:4496931/101‑1 (MQ=255)
ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag > 1:1294296/1‑101 (MQ=37)
ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag < 1:1063811/101‑1 (MQ=255)
gCCAATTCGCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGc < 1:3351117/101‑1 (MQ=255)
gCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGc > 2:158525/1‑101 (MQ=37)
ccAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcc > 1:2359969/1‑101 (MQ=37)
aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc > 2:2746508/1‑101 (MQ=37)
ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc < 2:1371737/101‑1 (MQ=255)
tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt > 1:914169/4‑101 (MQ=25)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc < 2:4109499/99‑1 (MQ=255)
cccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc < 2:2067508/100‑1 (MQ=255)
ccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc < 1:1749994/101‑1 (MQ=255)
cccaccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc < 1:2319124/101‑1 (MQ=255)
cccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCg > 2:3565847/1‑101 (MQ=255)
ccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCgg > 2:2959146/1‑101 (MQ=255)
ccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGt > 1:1167436/1‑101 (MQ=255)
ccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGt > 2:426744/1‑101 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt > 1:4412355/1‑101 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt > 2:34989/1‑101 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGCCt > 2:1794586/1‑101 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt > 2:289868/1‑101 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt > 1:1691652/1‑101 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt < 1:2129859/101‑1 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt > 1:2481085/1‑101 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt > 2:3117512/1‑101 (MQ=255)
|
GGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.CTT.G.G.C.TTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTT > NC_014034/2640083‑2640283
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|