| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 774,622 | 2 bp→TC | 100% | intergenic (‑76/+43) | oppB1 ← / ← oppA1 | oligopeptide ABC transporter permease OppB/oligopeptide ABC transporter periplasmic oligopeptide‑binding protein OppA |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 774,622 | 0 | G→T | 100.0% | 18.5 | 5 | intergenic (‑76/+44) | oppB1/oppA1 | oligopeptide ABC transporter permease OppB/oligopeptide ABC transporter periplasmic oligopeptide‑binding protein OppA |
| Reads supporting (aligned to +/- strand): new base (5/0): ref base (0/0): total (5/0) | ||||||||||
| * | NC_014034 | 774,623 | 0 | G→C | 100.0% | 18.3 | 5 | intergenic (‑77/+43) | oppB1/oppA1 | oligopeptide ABC transporter permease OppB/oligopeptide ABC transporter periplasmic oligopeptide‑binding protein OppA |
| Reads supporting (aligned to +/- strand): new base (5/0): ref base (0/0): total (5/0) | ||||||||||
GGGCCGCAGCGCCCCCCCCCCCCTGGGGAACCGGCCCTG.CCGGT.CG.A.CGTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTATTCG > NC_014034/774597‑774705
||
catcaacggcgcCCCCCCGCCCGGGTCGGACCGGCCCTG.CCGGTCCG.ACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGtt > 2:3061707/9‑101 (MQ=255)
caggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTG.CCGGTCCG.ACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCCCGtt > 2:284403/9‑101 (MQ=255)
aggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTG.CCGGTCCG.ACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTc > 2:3133495/8‑101 (MQ=255)
gcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTG.CCGGTCCG.ACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCa > 2:3819158/6‑101 (MQ=255)
ggcgcCCCCCCGCCCGGGTCGGACCGGCCCTG.CCGGTCCG.ACCCCACGGTATCTTATCCTGCGATCACTTCGTCCGCGACCAGTCGGCAACGTTCCAGTAt > 2:478285/2‑101 (MQ=255)
ggcgcCCCCCCGCCCGGGGCGGACCGGCCCCGCCCGGC.CGCC.CCCACGGTCTCTTATCCTGCGATCACTTCGCCCCCGACCCGGCGGCCACGTTcccggat > 1:390461/2‑96 (MQ=255)
gcCCCCCCGCCCGGGTCGGACGGGCCCTG.CCGGTCCG.ACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCCCGTTCCCGGATTCg > 1:2650545/1‑101 (MQ=255)
||
GGGCCGCAGCGCCCCCCCCCCCCTGGGGAACCGGCCCTG.CCGGT.CG.A.CGTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTATTCG > NC_014034/774597‑774705
Base quality scores:
ATCG
< 3 ≤
ATCG
< 23 ≤
ATCG
< 29 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|