Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,040,373 Δ1 bp 95.8% intergenic (‑121/‑267) RCAP_rcc01888 ← / → RCAP_rcc01889 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,040,3730C→.95.8% 19.1 ‑0.3 ‑0.6209intergenic (‑121/‑267)RCAP_rcc01888/RCAP_rcc01889hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (101/99):  ref base (3/5):  total (104/105)
Fisher's exact test strand distribution p-value = 7.21e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.50e-01

Only 100 of 220 total aligned reads displayed.

GGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGG.CGCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCA  >  NC_014034/2040272‑2040470
                                                                                                     |                                                                                                   
ggCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAc                                                                                                     >  1:1219610/1‑101 (MQ=255)
 gCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAcc                                                                                                    >  1:1027470/1‑101 (MQ=255)
   aCCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAccgg                                                                                                  >  1:3477953/1‑99 (MQ=255)
    ccGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgg                                                                                                 <  2:3174621/101‑1 (MQ=255)
      ggCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgggc                                                                                               >  1:1743630/1‑100 (MQ=255)
      ggCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgggc                                                                                               >  2:3338106/1‑100 (MQ=255)
         ctctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGa                                                                                           >  1:802778/1‑101 (MQ=255)
          tctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGCTCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGAt                                                                                          >  2:1141883/1‑101 (MQ=255)
          tctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGAt                                                                                          >  1:1134164/1‑101 (MQ=255)
          tctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGAt                                                                                          >  1:1541231/1‑101 (MQ=255)
           ctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATg                                                                                         <  2:1983814/101‑1 (MQ=255)
           ctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATg                                                                                         <  2:2916713/101‑1 (MQ=255)
            tGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATgg                                                                                        <  1:3591292/101‑1 (MQ=255)
            tGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATgg                                                                                        <  1:2732511/101‑1 (MQ=255)
             gggTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGc                                                                                       >  1:3241137/1‑101 (MQ=255)
                ttGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTa                                                                                    <  1:4286765/101‑1 (MQ=255)
                 tGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc                                                                                   >  2:2312794/1‑101 (MQ=255)
                    gATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcgcg                                                                                <  1:3360323/101‑1 (MQ=255)
                    gATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcgcg                                                                                >  1:2782981/1‑101 (MQ=255)
                     aTGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCgg                                                                               <  1:703867/101‑1 (MQ=255)
                     aTGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCgg                                                                               >  1:1805288/1‑101 (MQ=255)
                     aTGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGCCGAAGGTCAGACGTTGTGCAAAAG.ACCCGGGGCGGATGGCTTACGCgg                                                                               >  2:3284901/1‑101 (MQ=255)
                      tagAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGTGAGCCGGTCTAAGGTCAAACGTTGTCCCAAAGCA.CCGGGGCGGATGGCTTACGCGGt                                                                              <  2:3683529/99‑1 (MQ=255)
                      tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGt                                                                              <  1:2949189/101‑1 (MQ=255)
                      tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGt                                                                              <  1:2983481/101‑1 (MQ=255)
                      tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGt                                                                              <  1:1364049/101‑1 (MQ=255)
                       ggAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTa                                                                             >  2:4038793/1‑101 (MQ=255)
                        gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                                                            <  2:913824/101‑1 (MQ=255)
                        gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                                                            >  1:3895066/1‑101 (MQ=255)
                        gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                                                            <  1:3859816/101‑1 (MQ=255)
                        gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                                                            >  1:3716368/1‑101 (MQ=255)
                        gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                                                            <  1:2627163/101‑1 (MQ=255)
                        gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                                                            <  1:1983005/101‑1 (MQ=255)
                        gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                                                            <  1:2506009/101‑1 (MQ=255)
                         aaaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATg                                                                           >  1:4275942/1‑101 (MQ=255)
                           aaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgc                                                                         >  1:1846151/1‑101 (MQ=255)
                           aaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgc                                                                         >  2:2303918/1‑101 (MQ=255)
                           aaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgc                                                                         >  2:2479975/1‑101 (MQ=255)
                            aaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgcg                                                                        >  2:4437712/1‑101 (MQ=255)
                             aGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgcgc                                                                       <  2:31201/101‑1 (MQ=255)
                              gACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGcgcg                                                                      <  2:2598454/101‑1 (MQ=255)
                               gccGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGt                                                                     <  2:2118662/100‑1 (MQ=255)
                                 cGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGc                                                                   >  2:2069543/1‑101 (MQ=255)
                                 cGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGc                                                                   <  2:88978/101‑1 (MQ=255)
                                   gAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCa                                                                 >  2:3089257/1‑101 (MQ=255)
                                      cGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAg                                                              <  2:503463/101‑1 (MQ=255)
                                       ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGa                                                             <  1:340970/101‑1 (MQ=255)
                                        gCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAc                                                            <  2:2850712/101‑1 (MQ=255)
                                        gCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAc                                                            <  1:901178/101‑1 (MQ=255)
                                        gCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAc                                                            >  1:351702/1‑101 (MQ=255)
                                          cAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcgg                                                          >  2:1000560/1‑101 (MQ=255)
                                           aGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcggc                                                         >  1:4128426/1‑101 (MQ=255)
                                           aGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcggc                                                         <  1:2195756/101‑1 (MQ=255)
                                           aGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcgga                                                         >  2:1666143/1‑100 (MQ=255)
                                             gggCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCTGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcggcgg                                                       >  1:581977/1‑101 (MQ=255)
                                              ggCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACggcggc                                                      <  1:1413659/101‑1 (MQ=255)
                                               gCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGcc                                                     <  2:739065/101‑1 (MQ=255)
                                               gCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGcc                                                     >  1:2398927/1‑101 (MQ=255)
                                                ccAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCg                                                    <  1:3786456/101‑1 (MQ=255)
                                                 cAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGc                                                   >  2:2980127/1‑101 (MQ=255)
                                                 cAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGc                                                   >  2:2370492/1‑101 (MQ=255)
                                                  aGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.a                                                 <  1:2858190/101‑1 (MQ=255)
                                                     cGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAg                                              <  1:3057770/101‑1 (MQ=255)
                                                      gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAgg                                             >  1:2664289/1‑101 (MQ=255)
                                                        aGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGg.cc                                          <  2:25804/101‑2 (MQ=255)
                                                           gcgtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGg.ccgc                                        <  2:802696/97‑4 (MQ=255)
                                                              tgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGcc                                      >  1:313651/2‑101 (MQ=255)
                                                               gggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCa                                     <  2:1027382/101‑1 (MQ=255)
                                                               gggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCa                                     <  2:3029285/101‑1 (MQ=255)
                                                               gggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCa                                     <  1:4314540/101‑1 (MQ=255)
                                                                 gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATa                                   <  2:1743511/101‑1 (MQ=255)
                                                                  ggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATaa                                  <  2:1858896/101‑1 (MQ=255)
                                                                  ggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATaa                                  <  2:177642/101‑1 (MQ=255)
                                                                    aTCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGC.AAAGGCCGCGGCATAAGt                                >  2:1333716/1‑101 (MQ=255)
                                                                     gccGGTAGAAGGTCAGACGTTGTGCAAAAGC.CCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCTGCCGC.AAAGGCCGCGCCATAAGTg                               <  2:2149204/100‑1 (MQ=255)
                                                                      ccGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGa                              <  1:2353310/101‑1 (MQ=255)
                                                                      ccGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGa                              >  1:2827911/1‑101 (MQ=255)
                                                                       cGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAg                             <  2:3561154/101‑1 (MQ=255)
                                                                       cGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGC.AAAGGACGCGCCATAAGTGAg                             >  2:1532962/1‑101 (MQ=255)
                                                                        ggTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGc                            <  2:2696558/101‑1 (MQ=255)
                                                                        ggTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGc                            >  2:2629649/1‑101 (MQ=255)
                                                                        ggTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGC.AAAGGCCGCGCCATAAGTGAGc                            >  1:977178/1‑101 (MQ=255)
                                                                         gTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGcc                           >  2:2351103/1‑101 (MQ=255)
                                                                         gTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGcc                           >  1:2602000/1‑101 (MQ=255)
                                                                           cGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCa                         >  1:2297081/1‑101 (MQ=255)
                                                                            gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCAc                        <  2:1441462/101‑1 (MQ=255)
                                                                              aGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCAccg                      >  2:56415/1‑100 (MQ=255)
                                                                               ggTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCAccgg                     >  2:1628025/1‑99 (MQ=255)
                                                                                gTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGC.AAAGGCCGCGCCATAAGTTAGCCCAccggt                    >  2:474173/1‑98 (MQ=255)
                                                                                   aGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCg                >  2:3144760/1‑101 (MQ=255)
                                                                                    gACGGTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCgg               >  2:3767513/1‑101 (MQ=255)
                                                                                      cGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAg             <  1:474405/101‑1 (MQ=255)
                                                                                       gTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAgg            >  1:3284988/1‑101 (MQ=255)
                                                                                        ttGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCGAACTC.CGCGCCATAAGTGAGCCCA.CCGGTTCGGAggt           >  1:3810318/1‑100 (MQ=255)
                                                                                        ttGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggt           <  2:3477713/101‑2 (MQ=255)
                                                                                         tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggtt          <  2:4219660/101‑3 (MQ=255)
                                                                                           tgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggttgg        <  2:4238664/101‑5 (MQ=255)
                                                                                           tgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggttgg        >  1:2679088/1‑97 (MQ=255)
                                                                                                aaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCa  >  1:3156911/1‑101 (MQ=255)
                                                                                                aaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCa  <  1:4188737/101‑1 (MQ=255)
                                                                                                     |                                                                                                   
GGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGC.AAAGG.CGCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCA  >  NC_014034/2040272‑2040470

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG