| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,316,712 | Δ1 bp | 97.7% | intergenic (‑20/‑245) | RCAP_rcc02149 ← / → acnA | hypothetical protein/aconitate hydratase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,316,712 | 0 | A→. | 97.7% | 9.3 0.0 ‑0.4 | 173 | intergenic (‑20/‑245) | RCAP_rcc02149/acnA | hypothetical protein/aconitate hydratase |
| Reads supporting (aligned to +/- strand): new base (81/88): ref base (2/2): total (83/90) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.44e-01 | ||||||||||
Only 100 of 183 total aligned reads displayed.
GCCTGCGCCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCCCGGCGCTGAAGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGTTTTGCGATGATGCCTG > NC_014034/2316612‑2316808
|
gCCTGCGCCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTGa > 1:1786222/1‑101 (MQ=255)
cTGCGCCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTGagg < 2:326851/101‑3 (MQ=255)
cTGCGCCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTGagg > 2:1665832/1‑99 (MQ=255)
cTGCGCCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTGagg > 1:4431280/1‑99 (MQ=255)
cTGCGCCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTGagg > 1:3670490/1‑99 (MQ=255)
gcgcCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTGAGggt < 1:2012532/101‑2 (MQ=255)
gcgcCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTGAGggt > 1:3603266/1‑100 (MQ=255)
gcCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcg < 2:4158266/101‑1 (MQ=255)
gcCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcg < 2:1492783/101‑1 (MQ=255)
gcCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcg > 2:176401/1‑101 (MQ=255)
gcCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcg > 1:3693507/1‑101 (MQ=255)
ccAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcgc < 1:3234533/101‑1 (MQ=255)
ccAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcgc < 1:3679042/101‑1 (MQ=255)
ccAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcgc > 1:1258299/1‑101 (MQ=255)
cAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcgcg > 1:3556784/1‑101 (MQ=255)
aaaGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcgcgc > 1:4008985/1‑101 (MQ=255)
aaaGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcgcgc > 2:762978/1‑101 (MQ=255)
aaaGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcgcgc < 2:558350/101‑1 (MQ=255)
aaGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTcgcgcg > 1:2631795/1‑101 (MQ=255)
aGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGt < 2:1419383/101‑1 (MQ=255)
aGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGt < 1:1170505/101‑1 (MQ=255)
ccccccGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGc > 2:3415823/1‑101 (MQ=255)
ccccGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCa > 2:1328189/1‑101 (MQ=255)
cccGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCat < 1:3429123/101‑1 (MQ=255)
ccGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCatg > 2:1961695/1‑101 (MQ=255)
ccGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCatg < 1:3918131/101‑1 (MQ=255)
ccGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCatg > 1:1958171/1‑101 (MQ=255)
cGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCatga < 1:140964/101‑1 (MQ=255)
tCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCatgatg < 2:1026615/101‑1 (MQ=255)
cGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGc < 1:543715/101‑1 (MQ=255)
gTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCt < 2:3874794/101‑1 (MQ=255)
gTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCt > 1:1325892/1‑101 (MQ=255)
cctgcctgCCCCCATGCCACCATGGGAGCAACGGCAATAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCg < 1:3109870/101‑1 (MQ=255)
tgcctgccCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGct > 2:3647736/1‑101 (MQ=255)
tgcctgccCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGct < 1:2276733/101‑1 (MQ=255)
gcctgccCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGctc < 1:498676/101‑1 (MQ=255)
cctgccCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGctct > 1:2146987/1‑101 (MQ=255)
tgccCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTa < 1:1054963/101‑1 (MQ=255)
gccCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTAc > 1:52582/1‑101 (MQ=255)
ccccATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTg < 1:1016191/101‑1 (MQ=255)
cccATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGc < 2:4431008/101‑1 (MQ=255)
cccATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGc > 1:3147003/1‑101 (MQ=255)
ccATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTTAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCa < 1:3354533/101‑1 (MQ=255)
cATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAg < 2:2195976/101‑1 (MQ=255)
aTGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGc > 1:2678310/1‑101 (MQ=255)
tGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGcc > 1:1445530/1‑101 (MQ=255)
gCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGccc > 2:1206461/1‑101 (MQ=255)
gCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGccc < 2:3606524/101‑1 (MQ=255)
caccaTGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGccccc < 2:3254987/101‑1 (MQ=255)
caccaTGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGccccc < 2:4405812/101‑1 (MQ=255)
ccaTGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCcct > 2:4280993/1‑101 (MQ=255)
ccaTGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCcct < 2:643187/101‑1 (MQ=255)
caTGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCcctc > 2:3378440/1‑101 (MQ=255)
tGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCcctcct > 1:2972372/1‑101 (MQ=255)
gggAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTa > 2:750198/1‑101 (MQ=255)
gAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTaaa < 1:4103559/101‑1 (MQ=255)
aaCGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCgg < 1:1225468/101‑1 (MQ=255)
gCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGcgcc > 1:999487/1‑101 (MQ=255)
gCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGcgcc > 2:1814634/1‑101 (MQ=255)
gCAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGcgcc < 2:1418218/101‑1 (MQ=255)
ccgatctaGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGcgcc < 2:81168/94‑1 (MQ=255)
cAAGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGcgccg > 2:316487/1‑101 (MQ=255)
aaGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGcgccgc > 2:2727788/1‑101 (MQ=255)
aGAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCcgcg > 1:3233241/1‑101 (MQ=255)
gAAAGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCcgcgc > 2:1613527/1‑101 (MQ=255)
aaaGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCcgcgcg > 2:1688204/1‑101 (MQ=255)
aaaGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCcgcgcg < 1:1541601/101‑1 (MQ=255)
aaaGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTATTACTGCAGCCCCCCTCCTAAACCGGCGCagcgcg > 2:1457451/1‑101 (MQ=255)
aaGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCgcgcgc < 1:763058/101‑1 (MQ=255)
aGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCa < 1:1665943/101‑1 (MQ=255)
aGCCCGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCa > 2:2067927/1‑101 (MQ=255)
cccGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAgg < 1:101458/101‑1 (MQ=255)
cccGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAgg < 1:4378592/101‑1 (MQ=255)
cGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGc < 2:927760/101‑1 (MQ=255)
cGACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGc > 2:3028139/1‑101 (MQ=255)
gACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGcc > 2:2693430/1‑101 (MQ=255)
gACAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGcc > 1:4137370/1‑101 (MQ=255)
aCAGGATCATGCCTTCAATCGCGGCGCTG.ATGGTCGCGTGTGACATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCa < 2:1786103/101‑1 (MQ=255)
aCAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCa > 2:1230330/1‑101 (MQ=255)
cAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCaa > 1:2583181/1‑101 (MQ=255)
cAGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCaa > 1:3976688/1‑101 (MQ=255)
aGGATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAAt < 2:2752458/101‑1 (MQ=255)
ggATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATc < 1:1206554/101‑1 (MQ=255)
ggATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATc > 1:3437952/1‑101 (MQ=255)
gATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCa > 1:1228101/1‑101 (MQ=255)
gATCATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCa < 1:2715869/101‑1 (MQ=255)
cATGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAgg > 2:2070980/1‑101 (MQ=255)
aTGCCTTCAATCGCGGCGCTG.GGGGTCGCGGGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCCCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGt < 2:3556536/101‑1 (MQ=255)
aTGCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGt > 2:3882935/1‑101 (MQ=255)
gCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGttt < 2:3745685/101‑1 (MQ=255)
gCCTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGttt > 1:160527/1‑101 (MQ=255)
cTTCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGTTTTg > 2:1904112/1‑101 (MQ=255)
tCAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGTTTTGCg > 1:875501/1‑101 (MQ=255)
cAATCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGTTTTGCga > 1:23746/1‑101 (MQ=255)
aTCGCGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGTTTTGCgatg < 2:1077906/101‑1 (MQ=255)
gcGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGTTTTGCGatgatg < 1:2692591/100‑1 (MQ=255)
cGGCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGTTTTGCGATGAtgc > 1:210335/1‑101 (MQ=255)
ggCGCTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGTTTTGCGATGAtgcc < 2:2465848/101‑1 (MQ=255)
gcgcTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGTTTTGCGATGAtgcct > 1:3284209/1‑101 (MQ=255)
gcgcTG.AGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGTTTTGCGATGAtgcct < 2:2372850/101‑1 (MQ=255)
|
GCCTGCGCCAAAGCCCCCCGTCGGTCCTGCCTGCCCCCATGCCACCATGGGAGCAACGGCAAGAAAGCCCGACAGGATCATGCCTTCAATCCCGGCGCTGAAGGGTCGCGCGTGCCATGATGCCTCGCTCTTACTGCAGCCCCCCTCCTAAACCGGCGCCGCGCGCAGGGCCAATCAAGGTTTTGCGATGATGCCTG > NC_014034/2316612‑2316808
Base quality scores:
ATCG
< 3 ≤
ATCG
< 24 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 40 ≤
ATCG
|