Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,493,971 Δ1 bp 2.7% intergenic (+19/‑223) RCAP_rcc02319 → / → RCAP_rcc02320 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,493,9710G→. 2.7% 5.4 ‑1.6 ‑0.6146intergenic (+19/‑223)RCAP_rcc02319/RCAP_rcc02320hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (2/2):  ref base (30/112):  total (32/114)
Fisher's exact test strand distribution p-value = 2.09e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.73e-01

Only 100 of 164 total aligned reads displayed.

TGATGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.A.GGGGGGGCGC.TGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAGCAGA  >  NC_014034/2493876‑2494067
                                                                                                   |                                                                                                
tGATGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCg                                                                                              >  2:2541140/1‑101 (MQ=39)
tGATGCCCGAGCTGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCg                                                                                              <  2:1034073/101‑1 (MQ=38)
 gATGGCCGAGCTGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGc                                                                                             <  1:311820/101‑1 (MQ=38)
 gATGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGc                                                                                             <  1:2427169/101‑1 (MQ=39)
 gATGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGc                                                                                             <  1:3412795/101‑1 (MQ=39)
  aTGGCCGAGCTGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCa                                                                                            <  1:3199906/101‑1 (MQ=38)
       cGAGCTGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCgg                                                                                       <  1:2093715/101‑1 (MQ=38)
         aGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGAc                                                                                     <  1:1383635/101‑1 (MQ=37)
           cTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTc                                                                                   >  2:3437917/1‑101 (MQ=37)
           atccccCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTc                                                                                   <  2:300239/98‑1 (MQ=37)
             gCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTccc                                                                                 <  1:3374708/101‑1 (MQ=37)
             gCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCCCAAGCGGACTccc                                                                                 >  2:2327093/1‑101 (MQ=37)
             ccccACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGAGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGCTTGCCCCCG.TCCACACGCGGACTccc                                                                                 >  2:2171001/2‑101 (MQ=255)
              cccCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTcccc                                                                                <  1:4071429/101‑1 (MQ=25)
                cACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTcccccc                                                                              <  2:1981555/101‑1 (MQ=37)
                 aCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGGGC.TGCCCCCCCCCCCCCAGCGGGCTccccccc                                                                             >  2:2562952/1‑100 (MQ=255)
                 aCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCNCAAGCggnnnnnnnnnn                                                                             >  2:2156600/1‑91 (MQ=37)
                   ccGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGGCTCCCCCCggg                                                                           >  2:736734/1‑101 (MQ=25)
                     gcgcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGat                                                                         <  1:1159132/101‑1 (MQ=25)
                        cgccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATAtt                                                                      <  1:1982424/101‑1 (MQ=25)
                         gccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATAttt                                                                     <  1:576403/101‑1 (MQ=25)
                         gccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATAttt                                                                     <  2:2666185/101‑1 (MQ=25)
                          ccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGGGT.A.AGGGGGGGGCGC.TGGCCCCCGTGCGCAAGCGGACTCCCCCCGGGATATTTg                                                                    >  2:4198400/1‑101 (MQ=21)
                           cgcgTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgc                                                                   <  1:1034138/101‑1 (MQ=25)
                           cgcgTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgc                                                                   <  1:1096105/101‑1 (MQ=25)
                            gcgTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCCGCCGCCAGCGGCCTCCCCCCcggggattcgga                                                                  >  1:3178208/1‑92 (MQ=25)
                              gTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcagc                                                                >  1:1226414/1‑101 (MQ=25)
                                cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCaa                                                              <  2:3095694/101‑1 (MQ=25)
                                 tGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAg                                                             <  1:1683569/101‑1 (MQ=21)
                                   gCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGAt                                                           >  1:1735171/1‑101 (MQ=21)
                                    cccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATg                                                          <  2:3975030/101‑1 (MQ=21)
                                     ccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGa                                                         <  2:596979/101‑1 (MQ=21)
                                      cAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaa                                                        <  1:1466599/101‑1 (MQ=21)
                                      cAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaa                                                        <  2:2714774/101‑1 (MQ=21)
                                      cAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaa                                                        <  1:287907/101‑1 (MQ=21)
                                       aGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaaa                                                       <  2:3113942/101‑1 (MQ=21)
                                        gcgcCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAc                                                      <  1:767842/101‑1 (MQ=21)
                                        gccccgcGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAc                                                      <  2:1287237/98‑1 (MQ=18)
                                         cgccgcGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TTCCCCCCCCACGCAAGCGGACTCCCCCCGGGGTATTTGCCGCAAGATGaaaac                                                     >  2:2335619/1‑99 (MQ=21)
                                         cgccgcGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGGTATTTGCAGCCAAATTAAAcc                                                     >  1:4142835/1‑101 (MQ=18)
                                         cgccgcGCCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAcc                                                     <  2:2107580/101‑1 (MQ=18)
                                          gccgcGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGCTATTTGCAGCAAGATGAAAACg                                                    >  2:151467/1‑101 (MQ=18)
                                          gccgcGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg                                                    <  2:236091/101‑1 (MQ=21)
                                          gccgcGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg                                                    >  1:1831324/1‑101 (MQ=21)
                                          gccgcGGCGGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg                                                    <  1:2286702/101‑1 (MQ=21)
                                             gcggcgGGCGCGCGGCACGACAGGCCGAGTAA.A.GGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGag                                                 >  2:1337476/1‑100 (MQ=18)
                                             gcggcgGGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAt                                                 <  2:112598/101‑1 (MQ=21)
                                              cggcggGCGCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATg                                                <  1:2893087/101‑1 (MQ=21)
                                               ggcgggcgCGCGGAACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGc                                               >  2:1723956/1‑101 (MQ=18)
                                                gcgggcgCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGGCCCCCGTCCGCAAGCGGACTCCCCCCCGGATATTTGCAGCAAGATGaaaaacgaggtc                                              >  1:3065595/1‑92 (MQ=17)
                                                gcgggcgCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGcc                                              <  1:1811761/101‑1 (MQ=21)
                                                  gggcgCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCtt                                            >  2:628191/1‑101 (MQ=21)
                                                  gggcgCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCtt                                            >  2:4365982/1‑101 (MQ=21)
                                                   ggcgCGCGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGGCATTTGCAGCAAGATGAAACCGGTTGCCttt                                           >  2:1014575/1‑101 (MQ=18)
                                                    gcgcgcGGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc                                          <  1:4427462/101‑1 (MQ=21)
                                                     ggcgcgGCGCGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa                                         <  2:3910641/100‑1 (MQ=18)
                                                     cgcgcgGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa                                         <  2:171363/101‑1 (MQ=21)
                                                     cgcgcgGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa                                         <  1:2563115/101‑1 (MQ=21)
                                                     cgcgcgGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa                                         <  2:1105378/101‑1 (MQ=21)
                                                       cgcgGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATc                                       <  2:420997/101‑1 (MQ=21)
                                                       cgcgGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATc                                       >  1:1322135/1‑101 (MQ=21)
                                                        gcgGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCt                                      <  1:602055/101‑1 (MQ=21)
                                                         cgGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt                                     <  1:1235454/101‑1 (MQ=21)
                                                         cgGCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt                                     <  2:3551263/101‑1 (MQ=21)
                                                          ggCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTg                                    <  2:1014675/101‑1 (MQ=21)
                                                          ggCACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTg                                    <  2:4069210/101‑1 (MQ=21)
                                                            cACGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGcc                                  >  2:3568212/1‑101 (MQ=21)
                                                             aCGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGccc                                 <  1:1075202/101‑1 (MQ=21)
                                                             aCGACAGGCCGAGT.A.AGGGGGGGGCGC.GGCCCCCCGCCCGCAAGCCGAACCCCCCCAGGATATTTGCAGCAAAACGAAAACGGAGACCTTTCAACTTGccc                                 >  1:1666772/1‑101 (MQ=255)
                                                              cGACGGGCCGAGT.AGG.GGGGGGGCGC.TCCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATAAAACCGGATGCCTTTCATCTTGCCCg                                <  2:2023637/101‑1 (MQ=18)
                                                              cGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCg                                <  1:4347640/101‑1 (MQ=21)
                                                              cGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCg                                <  1:2561155/101‑1 (MQ=21)
                                                              cGACAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTATCATCTTGCCCg                                <  1:2350473/101‑1 (MQ=18)
                                                                aCAGGCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGaa                              <  2:3266273/101‑1 (MQ=21)
                                                                   ggCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata                           <  2:1477498/101‑1 (MQ=21)
                                                                   ggCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata                           >  1:2020565/1‑101 (MQ=21)
                                                                    gCCGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAatat                          <  1:2503497/101‑1 (MQ=21)
                                                                     ccGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATc                         <  2:183852/101‑1 (MQ=18)
                                                                      cGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc                        <  2:1380647/101‑1 (MQ=18)
                                                                      cGAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc                        <  1:3699225/101‑1 (MQ=18)
                                                                       gAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc                       <  1:3869050/101‑1 (MQ=18)
                                                                       gAGT.A.AGGGGGGGGCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc                       <  1:1093852/101‑1 (MQ=18)
                                                                       cgggtaagggggggggCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATc                         <  1:3026218/92‑1 (MQ=18)
                                                                           gtaaggggggggCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgg                     <  1:2456452/96‑1 (MQ=255)
                                                                            taaggggggggCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggg                    <  1:72196/97‑1 (MQ=255)
                                                                                 ggggggCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTg               <  2:2757045/101‑1 (MQ=255)
                                                                                   gagggggttGCCCCCCGTCCGCTCGCGGACTCCCCCCGTGATATTTGCAGAAAGATGAAACCGGATTCCTTTCTTCTTGCCCGAAATATCCCGGGGGGTGa              <  2:2316349/93‑1 (MQ=14)
                                                                                    gggCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAAt            >  1:1378452/1‑101 (MQ=255)
                                                                                     ggCGC.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATg           <  2:257003/101‑1 (MQ=255)
                                                                                      gcgc.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGACATTTGCAGCAAGATGAAAACGGATGCCTTTCATCTTGCCCGAACTATACCGGGGGGGGAGTgg          >  1:883252/1‑101 (MQ=18)
                                                                                       cgc.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGc         <  2:3804933/101‑1 (MQ=255)
                                                                                       cgc.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGc         <  1:2374334/101‑1 (MQ=255)
                                                                                         c.TGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGa       <  2:1195484/101‑1 (MQ=255)
                                                                                           tGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaa      <  1:3568460/101‑2 (MQ=255)
                                                                                           tGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaa      <  1:2144125/101‑2 (MQ=255)
                                                                                           tGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaa      <  2:2495794/101‑2 (MQ=255)
                                                                                             cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCCGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGAGAATGGCGaagcc   >  1:2946572/1‑97 (MQ=18)
                                                                                             cccccCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaagc    <  2:3332561/101‑4 (MQ=255)
                                                                                             cccccCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaagc    <  1:2808866/101‑4 (MQ=255)
                                                                                              ccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaagcca  <  1:1897539/101‑6 (MQ=255)
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TGATGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGT.A.A.GGGGGGGCGC.TGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAGCAGA  >  NC_014034/2493876‑2494067

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG