| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,572 | Δ1 bp | 2.5% | intergenic (+44/+150) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,572 | 0 | C→. | 2.5% | 4.4 ‑0.5 ‑0.7 | 159 | intergenic (+44/+150) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (2/2): ref base (49/106): total (51/108) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.94e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.08e-01 | ||||||||||
Only 100 of 178 total aligned reads displayed.
ATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGGGCGCTGCCCCC.CTC.CT..G..CTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCG > NC_014034/2566475‑2566671
|
aTCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.c < 2:1593355/101‑1 (MQ=37)
aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.ccccc < 2:1832720/101‑1 (MQ=25)
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.cccccc < 2:193483/101‑1 (MQ=25)
cTGGCCAGAGGGGTTAAGCCGACACAACATCGGCTGGCGCGAGCTCTGAGAAGAAACGGGGGGCGCTGCCCCC.ATC.TT..GGCCTTCGGCCAATTCA.cccccc < 2:4392946/101‑1 (MQ=12)
tgtcccGAGGTGTTCTGCCGCCGCGAGAGCGGCTGGCCCGCGCTCTGAGACGAAGCGGGGGGCGCTACCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCg < 1:784225/98‑1 (MQ=16)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCCATTCA.cccccccg > 2:3289298/1‑99 (MQ=25)
gCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGGCGCCCCC.CTC.TTGGG..CTTCGGGCAATTCA.CCCCCCcgg > 2:2311527/1‑101 (MQ=255)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCCATTCA.CCCCCCCGGat > 2:3591090/1‑101 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGat > 2:747689/1‑101 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGat < 2:597069/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGat < 1:1749655/101‑1 (MQ=25)
cgagctgTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGata < 2:658737/95‑1 (MQ=21)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGata.t < 2:8710/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGata.t < 2:832863/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGata.t < 1:2581725/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGata.t < 1:1022552/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCCGGata.t > 1:2267035/1‑101 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGCCCAATTCA.CCCCCCGGGata.t < 1:3286874/101‑1 (MQ=25)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTc < 1:149209/101‑1 (MQ=21)
gggTTCGGCCGCCGCGAGATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTc < 1:123515/101‑1 (MQ=18)
gggTGCGGCCGCCGCGACATCGGCGGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTc < 1:1301414/101‑1 (MQ=18)
ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCggg < 2:3811/101‑1 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCCCTTCCCCC.CTCTTT..GC.CTTCGGCCAATTCA.CCCCCCGCGGTA.TTTCGGGGaa > 2:1266654/1‑101 (MQ=21)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTTT..GC.CTTCGGCCAATTCA.CCCCCCCGGATA.TTTCTGGGAAg > 2:3968143/1‑101 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATa < 1:1595489/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATa < 1:3625649/101‑1 (MQ=21)
ccgcGGCGTCGGCTGGCGCGCGCTGTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCCATTCC.CCCCCCGGGATA.TTTCGGGCAAGATaa < 2:2853815/101‑1 (MQ=18)
ccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATaa < 2:4182062/101‑1 (MQ=21)
ccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATaa < 2:2601768/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATaaa < 1:2582465/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATaaa < 2:3837105/101‑1 (MQ=21)
tcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TCTCGGGCAAGATAaag < 1:3750265/100‑1 (MQ=21)
gcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGTCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAaag < 1:1358392/101‑1 (MQ=21)
gACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAaagaa < 2:1061428/101‑1 (MQ=21)
aCATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCCGGAAA.ATTCGGGCAAGATAaagaag > 1:2317880/1‑101 (MQ=21)
cATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAgg < 1:215566/101‑1 (MQ=21)
cATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAgg < 1:2985799/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCtt < 1:3569336/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCtt < 2:3464254/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCtt < 2:1394035/101‑1 (MQ=21)
gacTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCtt > 1:3966902/3‑101 (MQ=21)
gCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCttt > 1:4154432/1‑101 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCtttt < 2:2134379/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCtttt < 1:885005/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTc > 1:3459804/1‑101 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTc > 2:3361660/1‑101 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCCGGGTATTTTCGGGC.AGATAaaaaaagggttttt > 2:3027699/1‑92 (MQ=9)
gcgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:4349531/101‑1 (MQ=21)
gcgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 2:53519/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCC.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:2822833/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 2:3926459/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 2:1094175/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 1:2359893/101‑1 (MQ=21)
cgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 1:1807017/101‑1 (MQ=21)
cgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTc > 2:413218/1‑101 (MQ=21)
cgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCACCCCCCCGGGAAA.TTTCGGGCAAAAAAAAAAAGGTTTTTTCTttttt > 1:3164572/1‑99 (MQ=12)
cgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt < 1:3596700/101‑1 (MQ=21)
ctGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg > 1:1274440/1‑101 (MQ=21)
tGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGc < 2:1574485/101‑1 (MQ=21)
tGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGAAA.TTTCCTGCAAGATAAAGAAGGTCTTTTTCTTTCATCTTGc > 1:495608/1‑101 (MQ=18)
gagaCGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc < 2:271613/101‑1 (MQ=21)
gaCGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCg > 1:1777787/1‑101 (MQ=21)
cGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaa < 1:740473/101‑1 (MQ=21)
gAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCCATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 1:3107135/101‑1 (MQ=21)
gAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:4135017/101‑1 (MQ=21)
aaacggggggCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCT.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat < 1:4394270/96‑1 (MQ=21)
aacggggggCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata > 1:2794101/5‑101 (MQ=25)
aacggggggCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata < 1:3403555/97‑1 (MQ=25)
gggggCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc < 1:2729715/101‑1 (MQ=25)
gggggCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc < 1:3095488/101‑1 (MQ=25)
gggggCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATGCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc > 1:4105956/1‑101 (MQ=25)
ggggCGCTGCCCCCTCTT.GG..C..CTTTGGCCAATTCA..CCCCTGGGATA.TTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggggga < 2:2846502/101‑3 (MQ=2)
gcgcTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCgggg < 1:550421/101‑1 (MQ=37)
gcTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGa < 1:2932405/101‑1 (MQ=37)
tGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGGAAA.TTTCGGGGCAGATAAAGAGGGTTTTTTCCTTTCTTCTTTCCCGGAATATCCCCCGGGacc > 1:192838/1‑99 (MQ=16)
tGCCCCC.CTC.TT..GGCCTTCGGCCAACTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAAGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGc < 2:2564462/101‑1 (MQ=37)
gCCCCC.CTC.TT..GGCCTTCGGCCAATTCC.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGcc < 1:693658/101‑1 (MQ=38)
ccctcttggccTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCt > 1:3981012/11‑101 (MQ=255)
cctcttggccTTCGTCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCtt < 2:3267489/92‑1 (MQ=37)
ctcttggccTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTg < 1:281610/93‑1 (MQ=255)
cttggccTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcg < 1:3958514/95‑1 (MQ=255)
tggccTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcggg < 1:747769/97‑1 (MQ=255)
tggccTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcggg > 1:2972992/5‑101 (MQ=255)
cTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGcgggcggg > 2:2325259/1‑101 (MQ=255)
cGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGc < 1:329854/101‑1 (MQ=255)
cGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGc > 2:1158868/1‑101 (MQ=255)
cGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGc > 2:1456184/1‑101 (MQ=255)
ggCCAATTCG.CCCCCCGGGATA.TTTCGGGCGAGATAAAGAAGGTCTGTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCa < 2:3689381/101‑1 (MQ=255)
ccAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGGggggggggc > 1:1153559/1‑97 (MQ=255)
cAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAgcg < 1:3361897/101‑1 (MQ=255)
ttCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGccc > 1:3644170/1‑101 (MQ=255)
tCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGcccc > 2:3359653/1‑101 (MQ=255)
tCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGcccc < 2:2266890/101‑1 (MQ=255)
tCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGcccc > 1:1776744/1‑101 (MQ=255)
cA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTTCCCGAAATATCCCGGGGGACCCCGCCTGCGGGCGGGGGCCGGGccccc > 1:209796/1‑101 (MQ=37)
cA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGccccc > 2:1404180/1‑101 (MQ=255)
cA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGccccc < 2:2392515/101‑1 (MQ=255)
cA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGGCTTTTTCTTTCATCTTGCCCGAAATATCCCGGGGGGGCCCGCTTGCGGGGGGGGGGCGCGccccc > 2:3072127/1‑101 (MQ=21)
ccccctcCGGATA.TTTCGGGCAGGATAAAGCAGGTCTTTTCCCTCCACGTTGTCGCAAACACCCCGGGGGGGCCCGCCAGCGGGCGGGGGCAGCGCCCCCg < 2:1427563/100‑1 (MQ=255)
cccccccGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCg < 2:1374118/100‑1 (MQ=255)
|
ATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGGGCGCTGCCCCC.CTC.CT..G..CTTCGGCCAATTCA.CCCCCCGGGATA.TTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCG > NC_014034/2566475‑2566671
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|