| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,461,384 | Δ3 bp | 100% | intergenic (‑94/+34) | RCAP_rcc03260 ← / ← RCAP_rcc03261 | NAD‑dependent epimerase/dehydratase/TOBE domain‑containing protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,461,384 | 0 | A→. | 100.0% | 35.5 | 103 | intergenic (‑94/+36) | RCAP_rcc03260/RCAP_rcc03261 | NAD‑dependent epimerase/dehydratase/TOBE domain‑containing protein |
| Reads supporting (aligned to +/- strand): new base (46/45): ref base (9/0): total (56/47) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.81e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.73e-01 | ||||||||||
| * | NC_014034 | 3,461,385 | 0 | C→. | 100.0% | 25.1 | 101 | intergenic (‑95/+35) | RCAP_rcc03260/RCAP_rcc03261 | NAD‑dependent epimerase/dehydratase/TOBE domain‑containing protein |
| Reads supporting (aligned to +/- strand): new base (46/45): ref base (9/0): total (56/45) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.81e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.73e-01 | ||||||||||
| * | NC_014034 | 3,461,386 | 0 | C→. | 100.0% | 25.9 | 101 | intergenic (‑96/+34) | RCAP_rcc03260/RCAP_rcc03261 | NAD‑dependent epimerase/dehydratase/TOBE domain‑containing protein |
| Reads supporting (aligned to +/- strand): new base (46/45): ref base (9/0): total (56/45) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.81e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.10e-01 | ||||||||||
Only 100 of 111 total aligned reads displayed.
ATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGG.G.GG.GCAGCCGACCCCACCGGGCCGC.CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGC > NC_014034/3461289‑3461461
|||
aTCGCAAGGCCCCCGTTTCGCACCCGCAGGCTAGCGGGATCCACGGGCGCGGCCAGGCGCAGTTTGGCGCAGGGCCAAAGGAAGG.G.GGCGCAGCCGCccgg < 2:737691/101‑3 (MQ=255)
gCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGACCAAAGGAAGG.G.GGCGCAGCCGCccggccg < 2:4392298/101‑6 (MQ=255)
cGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGG.G.GGCGCAGCC.ACCCGGCCGGgcccc.caaccccgg > 1:3733976/1‑93 (MQ=255)
aCCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCg > 2:2040015/1‑101 (MQ=255)
cccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGt < 2:2107219/101‑1 (MQ=255)
ccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGtt < 2:2858808/101‑1 (MQ=255)
ccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGtt > 2:533440/1‑101 (MQ=255)
ccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGtt < 2:2679688/101‑1 (MQ=255)
ccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGtt < 2:4343925/101‑1 (MQ=255)
cGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTc < 1:1719150/101‑1 (MQ=255)
gCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCg < 2:1952006/101‑1 (MQ=255)
cAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGa < 1:663438/101‑1 (MQ=255)
cAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGa > 1:996430/1‑101 (MQ=255)
cAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGa < 1:2517397/101‑1 (MQ=255)
cAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGa > 2:2947658/1‑101 (MQ=255)
aGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGAt > 2:202186/1‑101 (MQ=255)
aGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGAt < 1:3417163/101‑1 (MQ=255)
aGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGAt < 2:3413417/101‑1 (MQ=255)
gCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATc < 2:4437657/101‑1 (MQ=255)
gCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GC..AGCCAACC.GGCCGCGCCCCCAACCCCGGTCGTTCGATc > 1:3211255/1‑101 (MQ=255)
cTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCa < 1:4174863/101‑1 (MQ=255)
cTTAGAAAGATGCGCGGGGCCGCCCCGCCGCAGTTTGGCGCAGGGCCAAAGGAAGG.G.GGCCCAGCC.ACCCCGCCG...CG..CCCCCAACCCCGGTCGTTCGATCa < 2:567523/101‑1 (MQ=255)
ttAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAg > 2:3713298/1‑101 (MQ=255)
ttAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAg > 1:564622/1‑101 (MQ=255)
tAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGt < 1:520629/101‑1 (MQ=255)
tAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGt < 1:1442277/101‑1 (MQ=255)
tAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGt > 1:3730562/1‑101 (MQ=255)
aGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGG.G.GGCGCAGCC.ACCCGGCCG...CGC.CCCCC.ACCCCGGTCGTTCGATCAGtt > 1:4339176/1‑101 (MQ=255)
aGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGtt < 2:3999632/101‑1 (MQ=255)
aGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGtt > 1:3207027/1‑101 (MQ=255)
aGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCCTTCGATCAGtt > 2:2135246/1‑101 (MQ=255)
cAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCt > 1:708295/1‑101 (MQ=255)
aGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCtt < 2:3955126/101‑1 (MQ=255)
gATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGc > 2:2197475/1‑101 (MQ=255)
gATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGc > 1:2642963/1‑101 (MQ=255)
aTGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGcc > 2:2675822/1‑101 (MQ=255)
aTGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGcc > 1:1754427/1‑101 (MQ=255)
aTGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGcc > 1:566592/1‑101 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg > 2:3434680/1‑101 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg < 2:1244882/101‑1 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg > 1:4204945/1‑101 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg < 2:2349676/101‑1 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg > 1:2194690/1‑101 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg < 2:51690/101‑1 (MQ=255)
gCACGGGCGCGGTCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcga > 1:2424205/1‑101 (MQ=255)
gCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcga < 1:2848254/101‑1 (MQ=255)
gCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGGCGGTCGATCAGTTCTTCCcga > 2:2722907/1‑101 (MQ=255)
cACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgac < 1:4440837/101‑1 (MQ=255)
cACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgac < 2:2192517/101‑1 (MQ=255)
cACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgac < 1:3282765/101‑1 (MQ=255)
cACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgac < 2:3474612/101‑1 (MQ=255)
aCGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgacg > 2:3756480/1‑101 (MQ=255)
cGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGCTCAGTTCTTGCcgacga > 1:743932/1‑101 (MQ=255)
gggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGAt > 1:485732/1‑101 (MQ=255)
gggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGAt > 2:2858817/1‑101 (MQ=255)
gggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGAt > 1:3089612/1‑101 (MQ=255)
ggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATg > 1:821679/1‑101 (MQ=255)
ggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATg < 1:2586714/101‑1 (MQ=255)
gcgcGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCTGGTCGTTCGATCAGTTCTTGCCGACGATGa < 2:3976994/101‑1 (MQ=255)
cgcgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGAc < 2:3867993/101‑1 (MQ=255)
cgcgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGAc > 1:3910591/1‑101 (MQ=255)
gcgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACg < 2:698467/101‑1 (MQ=255)
gcgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACg < 1:4051574/101‑1 (MQ=255)
cgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGt > 2:4315298/1‑101 (MQ=255)
cgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGt < 2:2883855/101‑1 (MQ=255)
ggCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTc > 2:1009380/1‑101 (MQ=255)
ggCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTc > 2:2125424/1‑101 (MQ=255)
ggCCAGACGCAGTTTGGCCCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTc < 1:1693145/101‑1 (MQ=255)
gCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.A.G.GG.GC.GC..AACCAACC.GGCGGCGGCCCCAACGCCGGTCGTTCGCTCAGTTCTTGCCGCCGCTGACGTCa > 2:2178736/1‑101 (MQ=255)
ccAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTccg > 2:3184684/1‑99 (MQ=255)
cAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCaga < 1:1596684/101‑1 (MQ=255)
cAGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCaga < 1:3936270/101‑1 (MQ=255)
aGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCagag < 1:3069809/101‑1 (MQ=255)
aGACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCagag < 1:1563014/101‑1 (MQ=255)
aGACGAAGTTTGGCGCAGGGCCAAAGGAA.G.T.GT.GC.GCAGGCAC..CCGGGCGCG.CCCCCAACCCCGGTCGTTCTATCAGTTCTTTGCGACGATGACGTCagag > 2:738617/1‑101 (MQ=255)
gACGCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAgg > 2:4120964/1‑101 (MQ=255)
gCAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCt > 1:4432896/1‑101 (MQ=255)
cAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCtt < 1:274372/101‑1 (MQ=255)
cAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCtt < 2:622617/101‑1 (MQ=255)
cAGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCtt > 2:1557234/1‑101 (MQ=255)
aGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtg > 1:3418041/1‑101 (MQ=255)
aGTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtg < 1:913877/101‑1 (MQ=255)
gTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtga > 2:352415/1‑101 (MQ=255)
gTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtga > 1:1066661/1‑101 (MQ=255)
gTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtga > 1:1232571/1‑101 (MQ=255)
gTTTGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtga < 1:1243131/101‑1 (MQ=255)
tttGGCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtgat < 2:154270/101‑1 (MQ=255)
tGGCGCAGGGCCAAATGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGGCGTTCGATCAGTTCTTGCCGACGGTGACATCAGGGACACtgatga > 2:2994113/1‑101 (MQ=255)
tGGCGCAGGGCCAAAGGAAGGAG.GC.GCAGCC.ACCC.....GGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtgatga > 1:2538275/1‑101 (MQ=255)
tGGCGCAGGGCCAAAGGAAGG.GAGC.GCAGCC.ACCCTGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtgatga < 2:743852/101‑1 (MQ=255)
tGGCGCAGGGCCAAAGGAAGG.G.GGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCCGTTCTTGCCGACGATGACGTCAGAGGCCTtgatga > 2:1792325/1‑101 (MQ=255)
tGGCGCAGGGCCAAAGGAAGG.G.GGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtgatga > 1:270951/1‑101 (MQ=255)
ggCGCAGGGCCAAAGGAAGG.G.GGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTgatgat > 2:1589245/1‑101 (MQ=255)
ggCGCAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTgatgat < 2:2798682/101‑1 (MQ=255)
cgcAGGGCCAAAGGAAGG.G.GGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcg > 1:2120997/1‑101 (MQ=255)
cgcAGGGCCAAAGGAAGG.G.GGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcg > 1:1282155/1‑101 (MQ=255)
cgcAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcg > 2:2880198/1‑101 (MQ=255)
gcAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcgc < 1:363640/101‑1 (MQ=255)
gcAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcgc > 1:3375662/1‑101 (MQ=255)
gcAGGGCCAAAGGAA.G.G.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcgc > 2:4175234/1‑101 (MQ=255)
|||
ATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGG.G.GG.GCAGCCGACCCCACCGGGCCGC.CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGC > NC_014034/3461289‑3461461
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|