| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 568,802 | Δ1 bp | 7.0% | intergenic (‑98/+68) | RCAP_rcc00530 ← / ← carB | hypothetical protein/carbamoyl‑phosphate synthase large subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 568,802 | 0 | C→. | 7.0% | 28.2 ‑0.6 ‑0.7 | 158 | intergenic (‑98/+68) | RCAP_rcc00530/carB | hypothetical protein/carbamoyl‑phosphate synthase large subunit |
| Reads supporting (aligned to +/- strand): new base (6/5): ref base (94/53): total (100/58) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.34e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.09e-01 | ||||||||||
Only 100 of 209 total aligned reads displayed.
CATTCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCGAGATTTCGCC > NC_014034/568702‑568902
|
aTTCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.cc > 1:3324516/1‑101 (MQ=255)
ttCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.ccc < 2:183521/101‑1 (MQ=255)
ttCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCGG.cca > 1:4284468/1‑100 (MQ=255)
tCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.cccc > 1:4395034/1‑101 (MQ=255)
tCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.cccc < 2:3376824/101‑1 (MQ=255)
tCCTGCATCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGAGCTGCGGCATCCTG.cccc > 2:2582630/1‑101 (MQ=255)
ccTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.ccccc > 1:864313/1‑101 (MQ=255)
ccTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCCGCATCCTG.ccccc > 1:906836/1‑101 (MQ=255)
gCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.ccccccc.c < 1:887067/101‑1 (MQ=255)
cTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.ccccccc.ccc < 1:2158906/101‑1 (MQ=255)
tCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGCCCCCCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCg < 1:2582801/101‑1 (MQ=255)
tCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCg > 1:3495684/1‑101 (MQ=255)
cggTTTCGGTAGGGGAACCGGGGCTTACGCCGGTGGCGGGGGGGGGGCAATGACCCGCAGGGGTTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAc < 2:1107040/99‑1 (MQ=255)
tCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGag > 2:2610708/1‑101 (MQ=255)
cTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGCC.GGGagg > 1:2629361/1‑101 (MQ=255)
cTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGagg < 2:295424/101‑1 (MQ=255)
tGTATGTGATCCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGTTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGaggg < 2:3449288/101‑1 (MQ=255)
tGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGgggg > 1:4049106/1‑101 (MQ=255)
gTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGggggg > 1:295459/1‑100 (MQ=255)
gTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGagggc < 2:1750409/101‑1 (MQ=255)
gTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGagggc > 2:2498241/1‑101 (MQ=255)
aTGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGagggca.g > 2:2517825/1‑101 (MQ=255)
aTGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG..CCCCCC.CCCGAC.GGGagggca.gg > 1:729841/1‑101 (MQ=255)
tgtgAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGagggca.gg < 2:4379277/101‑1 (MQ=255)
tgAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGggggca.gggc > 1:3761810/1‑101 (MQ=255)
gAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGGGGGCC.GGGCt > 2:897835/1‑101 (MQ=255)
aaCCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTg < 1:2595726/101‑1 (MQ=255)
aaCCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTg < 2:3324284/101‑1 (MQ=255)
aCCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTgg > 1:631207/1‑101 (MQ=255)
ccGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGt < 2:2633815/101‑1 (MQ=255)
cGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGAGGGCG.GGGCTGGtt > 2:1333305/1‑101 (MQ=255)
ggggCTTACGCCTGGGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGttt < 1:3244149/101‑1 (MQ=255)
gggCTTACGCCTGTGGCTGCGGTGGGGCAATGCCCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTc < 1:316239/101‑1 (MQ=255)
ggCTTACGCCGGGGGCTGCGGTGGGGCAATGCCCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCg < 1:1296394/101‑1 (MQ=255)
cTTACGCCTGTGGCTGCGGTGGGGCAATGGCCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCGC.GGGGGGGGC.GGGGTGGTTTTggg > 2:3032459/1‑101 (MQ=255)
cTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGGGGGCA.GGGCTGGTTTCggg > 1:2124526/1‑101 (MQ=255)
tACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGGGGGCAGGGGCGGGTTTGgggg > 2:3993962/1‑100 (MQ=255)
aCGCCTTTGGAGTCGTTGGGTCGATGTCCCGATCGGGGTTGCGAAGGGGCTTTGTCATCCTG.CCCCCCC.CCCGAC.GGGAGTGCA.GGGCTTGTTTCGggcgg < 2:2063741/101‑1 (MQ=255)
aCGACTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGGTTCGggcgg > 2:3773899/1‑101 (MQ=255)
gCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGGGGGCA.GGGCTGGGTTCGggggggc > 2:2403236/1‑99 (MQ=255)
ccTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCaa < 1:1802348/101‑1 (MQ=255)
ccTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCaa > 2:1175886/1‑101 (MQ=255)
cTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAg > 1:4132813/1‑101 (MQ=255)
cTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGGTTCGGGCGGCAAg > 2:382021/1‑101 (MQ=255)
cTGTGGCTGCGGGGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAg < 1:1697573/101‑1 (MQ=255)
tgtgGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGGGGGCA.GGGCTGGTTTCGGGGGGGAAgg > 2:4188636/1‑101 (MQ=255)
tgtgGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGGTTCGGGCGGCaaag > 2:2258625/1‑99 (MQ=255)
tgtgGCTGCGGTGGGCCAAAAACCCGCACGGGATTGTGAAGGCGCTGCGGCGTCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAgg < 2:1004147/101‑1 (MQ=255)
tgggggtGCGGTGGGGCAATGCCCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTGCCCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAg < 1:3155742/95‑1 (MQ=255)
gtgGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCG.GGGCTGGTTTCGGGCGGCAAGgc < 1:1881979/101‑1 (MQ=255)
gtgGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCCCGGGGGGGGCG.GGGCGGGTTTCGGGGGGCAAgg > 1:971110/1‑101 (MQ=255)
gtgGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGAGGGCA.GGGCTGGGTTCGGGGGGCAAggg > 1:4103605/1‑100 (MQ=255)
gCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG..CCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGccc < 2:320730/101‑1 (MQ=255)
gtgggggggggCAATGCCCCGCCGGGGCTTGTGAAGGCGCGGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGccc < 1:1640363/94‑1 (MQ=255)
cTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGccc > 1:2509866/1‑101 (MQ=255)
tGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGCC.GGGAGGGCA.GGGCTGGGTTCGGGCGGCAAGGCGcccc > 1:3193996/1‑100 (MQ=255)
ggCGGTGGGCCAATGGCCCGCGCGGGCTTGTGAAGGGGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCcg < 2:2162046/100‑1 (MQ=255)
gTGGGGCAATGCCCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCcgcggc < 1:656126/101‑1 (MQ=255)
ggggCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCCC.CGGGGGGCC.GGGGCGGGTTCTGGGGGCCAGGGGCCcccgggcg > 2:3622663/1‑98 (MQ=255)
gggCAATGACCCGCACGGGCTGGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCcgcggcgcg < 1:1607399/101‑1 (MQ=255)
ggCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCcgcggcgcgg < 2:1579283/101‑1 (MQ=255)
ggCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG..CCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCgcggcgcggc > 2:1948888/1‑101 (MQ=255)
gcacgtccccGCAGGGGTTTTTGACGGCGCTGCTGCCTCCGC.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCgcggcgcggc < 2:833950/94‑1 (MQ=255)
aaTGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCCACCCGAC.GGGGGGGCG.GGGCTGGTTTCGGGGGGCAGGGCGCCCGCGGCGCGCcc > 2:518569/1‑101 (MQ=255)
aTGCCCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGt < 1:1925533/101‑1 (MQ=255)
aTGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCCAGGGGCCCGCGGCGCGGCCGt > 2:335612/1‑101 (MQ=255)
tgccccGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG..CCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGc < 1:1611602/98‑1 (MQ=255)
tGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCggg > 1:3365984/1‑99 (MQ=255)
gACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTGCCCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCCCGGCGCGGGCggg > 2:1791997/1‑99 (MQ=255)
gACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG..CCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGGTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCggggc > 1:3024952/1‑97 (MQ=255)
gccggggCTTGTGAAGGGGCTGCGGCCCCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCt < 1:3078530/97‑1 (MQ=255)
gCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCt > 2:3225148/1‑101 (MQ=255)
gCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCCCGGCGCCGCCGTGCCTGCt > 2:919691/1‑101 (MQ=255)
gcGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTa < 2:646711/100‑1 (MQ=255)
ggCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGGGCGGCCGCGCCCGCTCAccc > 1:1065320/1‑99 (MQ=255)
cTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGACCGTGCCTGCTTACGCCt < 1:2517988/101‑1 (MQ=255)
ttGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGGGGGCA.GGGCTGGTTTCGGGCGGGAAGGGGCCCGCGGCGCGGCCGGGCCCGCTTACCcccc > 1:4197571/1‑99 (MQ=255)
tgtgAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGc < 2:2818407/101‑1 (MQ=255)
gtgAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGGGCCCGCGGCGCGGCCGGGCCTGCTTACGCCTGcc > 1:2051654/1‑100 (MQ=255)
gtgAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCa < 2:456747/101‑1 (MQ=255)
gtgAAGGCCCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCa < 1:3963871/101‑1 (MQ=255)
tgAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGAGGGCC.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGGCGGGCCTGCTTACGCCTGccg > 2:2879399/1‑99 (MQ=255)
gggaGGGGCCGCGGCCCCCTT.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAg < 1:386497/98‑1 (MQ=255)
aaGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCTTACGCCTGCAGCg > 1:2231840/1‑101 (MQ=255)
aGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCgg < 2:631139/101‑1 (MQ=255)
ggCGCGGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGc < 1:2750486/101‑1 (MQ=255)
gcgcGGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGcc < 1:1818404/101‑1 (MQ=255)
cggggCGGCCTCCCG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCg < 2:1501784/97‑1 (MQ=255)
cgcTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCC.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCTTACGCCTGCCGCGGCCg > 1:1330278/1‑101 (MQ=255)
cccTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCg < 2:1896866/99‑1 (MQ=255)
gcTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGGC.GGGCTGGTTTCGGGGGGGAAGGCGCCCGGGGGGCGGCCCGGCCCGCTTACGCCTGCAGCGGGCgg > 2:1082275/1‑101 (MQ=255)
cTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCCCAGCCGTGCCTGCTTACCCCTGCAGCgggccgg > 2:3580742/1‑96 (MQ=255)
cGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCg < 2:4215020/101‑1 (MQ=255)
ggCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCga > 1:3667713/1‑101 (MQ=255)
gccttCCGG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCCCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCga < 1:382060/97‑1 (MQ=255)
gCATCCTC.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCgag < 1:3010687/101‑1 (MQ=255)
ccgg.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCGAGAttt < 1:2722320/98‑1 (MQ=255)
ccTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGCCCCAGAgtt > 2:2102291/1‑101 (MQ=255)
ccTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCGAGAttt < 2:2745155/101‑1 (MQ=255)
ccTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCTTACGCCTGCAGCGGCCGGGCCGAGGttt > 2:310019/1‑101 (MQ=255)
|
CATTCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCA.GGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCGAGATTTCGCC > NC_014034/568702‑568902
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 22 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|