| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,734,841 | +C | 96.3% | intergenic (‑94/+99) | RCAP_rcc01603 ← / ← RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,734,841 | 1 | .→C | 96.3% | 13.9 ‑4.2 ‑0.0 | 188 | intergenic (‑94/+99) | RCAP_rcc01603/RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (67/114): ref base (6/1): total (73/115) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.44e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.34e-01 | ||||||||||
Only 100 of 215 total aligned reads displayed.
GTGTCATCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.G.CCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA > NC_014034/1734741‑1734932
|
tgtCATCGAACCCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.G.c < 2:4170474/101‑1 (MQ=255)
tCATCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.G.ccc > 2:4004032/1‑101 (MQ=255)
cATCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.G.cccc > 1:3303071/1‑101 (MQ=255)
gAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.G.ccccccgt < 1:3592066/101‑4 (MQ=255)
aacccTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.G.ccccccgtc < 1:3229280/98‑5 (MQ=255)
agccTCCGGGGAATGGCGCCTCCTAGCAGCCGGGGCGGGCACGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.G.ccccccgtcc < 2:1565131/99‑6 (MQ=38)
aaCCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.G.ccccccgtcc > 1:600902/1‑96 (MQ=255)
ccTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTg < 1:3198735/101‑1 (MQ=255)
cTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGc > 1:4005827/1‑101 (MQ=255)
cgggggAATGGCGCATCGAAACGGCCGGGTCGGGCAAGCCAACGCCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCgg < 2:736823/99‑1 (MQ=25)
ccGGGGAATGGCGCATCCTAGCAGCGGGGGGGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCgg < 1:2132685/101‑1 (MQ=38)
cGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGa > 2:3617784/1‑101 (MQ=255)
cGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGa > 2:1951098/1‑101 (MQ=255)
ggggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGAc > 1:2484427/1‑101 (MQ=255)
gggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACt < 1:2288389/101‑1 (MQ=255)
ggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTc > 2:4154457/1‑101 (MQ=255)
ggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTc > 2:3426869/1‑101 (MQ=255)
aaTGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTccc > 1:869240/1‑101 (MQ=255)
tGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTccccc > 1:1885721/1‑101 (MQ=255)
ggggcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTcccccc < 2:1161360/98‑1 (MQ=255)
gcgcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.g < 1:3444358/101‑1 (MQ=255)
gcgcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.g < 2:692567/101‑1 (MQ=255)
gcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.ggg > 1:672385/1‑101 (MQ=255)
gcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.ggg < 1:1875790/101‑1 (MQ=255)
ctacccgagcagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.ggg < 1:3657743/94‑1 (MQ=25)
ccctCCTCGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.ggg < 2:2131813/98‑1 (MQ=25)
cATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGa > 2:2340325/1‑101 (MQ=255)
agccgggcagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGat < 1:792191/95‑1 (MQ=25)
aTCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGat > 2:3699147/1‑101 (MQ=255)
tCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGata < 2:626711/101‑1 (MQ=255)
tCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGAGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.cgggca > 1:3823560/1‑98 (MQ=37)
ccTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGatat < 2:177687/101‑1 (MQ=255)
tAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATAttt > 2:2176303/1‑101 (MQ=255)
agcagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TCC.CCCCCGTCCTGCGGCCTcccccccagccagccc > 1:904482/1‑91 (MQ=25)
gcagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTAt < 1:2642214/101‑1 (MQ=255)
cagcGGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATg < 2:2301188/101‑1 (MQ=255)
cagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATg > 1:3389174/1‑101 (MQ=255)
cagcCGGGGCGGGAAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATg < 2:4093794/101‑1 (MQ=255)
agcCGGGGGGGGCAAGCCAAAGGCTGGCGGTGGGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATgg < 2:2791345/101‑1 (MQ=18)
agcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATgg > 1:2240235/1‑101 (MQ=255)
gcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGc > 2:3349358/1‑101 (MQ=255)
ccGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCa < 1:2525368/101‑1 (MQ=255)
ccGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCa < 2:3639865/101‑1 (MQ=255)
cGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCaa < 1:4271323/101‑1 (MQ=255)
cGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCaa > 2:2971250/1‑101 (MQ=255)
cGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCaa < 1:2705353/101‑1 (MQ=255)
cGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGACCTTTTTGGcca > 1:1634872/1‑99 (MQ=21)
ggggCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAg < 2:2549089/101‑1 (MQ=255)
ggggCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAg > 1:2059241/1‑101 (MQ=255)
ggggCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAg > 1:707451/1‑101 (MQ=255)
ggggCAGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAg > 2:2195979/1‑101 (MQ=255)
gggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGa > 2:2502495/1‑101 (MQ=255)
cgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGa < 2:4032022/101‑1 (MQ=255)
ggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGaaa > 2:1060486/1‑101 (MQ=255)
gcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAAc > 2:3270054/1‑101 (MQ=255)
gcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAAc < 1:962864/101‑1 (MQ=255)
cAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACt < 2:1579545/101‑1 (MQ=255)
aGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGc > 2:1445076/1‑101 (MQ=255)
aGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGc < 1:2657759/101‑1 (MQ=255)
cAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGc > 2:3872315/1‑101 (MQ=255)
cAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGACATTTATGGCAAGATGAAACTGC.GGc > 2:1983972/1‑101 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGcc > 2:3400753/1‑101 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGcc < 2:1075417/101‑1 (MQ=255)
ggCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTc < 1:1737590/101‑1 (MQ=255)
gCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCa < 1:1852554/101‑1 (MQ=255)
cTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCAt > 2:2884406/1‑101 (MQ=255)
tGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGGCTTCATc > 1:3027659/1‑101 (MQ=255)
gACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCt > 2:1721175/1‑101 (MQ=255)
gACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCt < 2:152508/101‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTAGGGCAAGATGAAACTGG.GGCCTTCATCtt > 1:4032815/1‑101 (MQ=18)
cGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTg < 2:2710461/101‑1 (MQ=255)
gCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGc < 2:1001358/101‑1 (MQ=255)
cTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGcc > 2:3731071/1‑101 (MQ=255)
gCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCAt < 2:1363499/101‑1 (MQ=255)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATa < 1:506585/101‑1 (MQ=255)
tCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATaaa < 2:308137/101‑1 (MQ=255)
tCAGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATaaa < 1:298829/101‑1 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAata < 1:3747060/101‑1 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAata < 1:1477346/101‑1 (MQ=255)
ccGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATc < 2:3375367/101‑1 (MQ=255)
ccGACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATc > 1:1114658/1‑101 (MQ=255)
gACGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATccc < 2:818815/101‑1 (MQ=255)
aCGGGCCGGGCAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.g < 1:3569792/101‑1 (MQ=255)
cgggccgggcAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.gg > 2:3951608/1‑101 (MQ=255)
tgacggacggggggCTC.T.G.CCCCCCGGCTTCG..CTCCCCCC.GGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTg > 1:3088440/9‑101 (MQ=2)
ccgggcAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTg > 1:772477/1‑101 (MQ=255)
cgggcAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGc < 2:3818961/101‑1 (MQ=255)
cgggcAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGc > 2:3917176/1‑101 (MQ=255)
cgggcAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGc < 1:2751702/101‑1 (MQ=255)
cggacggggggCTC.T.G.CCCCCCGGCTTCG..CTCCCCCC.GGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaat > 1:3508645/6‑98 (MQ=2)
cggacggggggCTC.T.G.CCCCCCGGCTTCG..CTCCCCCC.GGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaat > 2:1680161/6‑98 (MQ=2)
gcAGGGGGGCGCTT.C.CCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCggg < 1:4154718/101‑1 (MQ=255)
cAGGGGGGCGC.T.GCCCCCCGTCCTGCGTACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCgggg < 2:708675/101‑1 (MQ=255)
cAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCCGGGGATTTTTTTGCCAAGAGGAAATGGG.GCCCTTATTTTTCCCAAAAAATTCCC.GGGGGGGggg > 1:1651469/1‑101 (MQ=2)
cAGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCgggg < 1:3699400/101‑1 (MQ=255)
agcggggCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATCTTTATGGCAAGATGAAACCGC.GGCCTTCATCTTGCCATAAATATCCC.GGGTTGTGGGGc > 2:4108659/4‑101 (MQ=14)
aGGGGGGCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGc < 2:3302839/101‑1 (MQ=255)
ggggggCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCa < 1:1595696/101‑1 (MQ=255)
ggggCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCaga > 1:1256737/1‑101 (MQ=255)
ggggCGC.T.GCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCaga < 2:600834/101‑1 (MQ=255)
|
GTGTCATCGAAACCTCCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.T.G.CCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA > NC_014034/1734741‑1734932
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|