| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,740,767 | +G | 1.8% | intergenic (+4/+131) | cxp → / ← RCAP_rcc01610 | thermostable carboxypeptidase 1/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,740,767 | 1 | .→G | 1.8% | 2.2 ‑2.3 ‑0.0 | 167 | intergenic (+4/+131) | cxp/RCAP_rcc01610 | thermostable carboxypeptidase 1/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/3): ref base (90/74): total (90/77) | ||||||||||
| Fisher's exact test strand distribution p-value = 9.60e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.64e-01 | ||||||||||
Only 100 of 190 total aligned reads displayed.
GCGCGAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.GGGGCGCT.GCCCCCCG.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCG > NC_014034/1740667‑1740863
|
gcgcgAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGc > 1:3713583/1‑101 (MQ=255)
gcgcgAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGc > 1:2147821/1‑101 (MQ=255)
gcgAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.Ga < 1:3057491/101‑1 (MQ=255)
cgAGACGACCGTGGCCGCCTGCGGTTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.g < 1:3229986/101‑1 (MQ=255)
gagaCGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.gg > 1:2828798/1‑101 (MQ=255)
agaCGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.ggg > 2:860567/1‑101 (MQ=255)
aTCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGcacctgcaggg < 2:1394723/101‑11 (MQ=255)
tCGTGACCGCCGGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.gggggcgct < 2:2515602/101‑6 (MQ=255)
cGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.g > 2:3950488/1‑101 (MQ=255)
cGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.g > 2:1842027/1‑101 (MQ=255)
gTGCCCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gc < 1:2962826/101‑1 (MQ=255)
gTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gc > 1:2932177/1‑101 (MQ=255)
gccGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccc < 2:3701473/100‑1 (MQ=255)
ccGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gccccc < 1:2466878/101‑1 (MQ=255)
ccGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gccccc < 2:3201063/101‑1 (MQ=255)
cGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATATGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccg < 2:217295/101‑2 (MQ=255)
gCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgc < 2:310445/101‑3 (MQ=255)
cggggggTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgccg < 1:2615235/97‑5 (MQ=255)
cTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgccg > 1:1709852/1‑97 (MQ=255)
cTGCGGGTGCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATGCGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgccg < 2:1021111/101‑5 (MQ=255)
tGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgccga > 1:1598597/1‑96 (MQ=255)
gggTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGGGCT.GCCCCCGC.CGAGGc > 2:1189904/1‑101 (MQ=255)
ggTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCg > 1:3993281/1‑101 (MQ=255)
gTTCGAGCCAACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGa > 2:266268/1‑101 (MQ=255)
ttCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGAt > 2:2253122/1‑101 (MQ=255)
aGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCt > 2:1226908/1‑101 (MQ=255)
gCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTc < 1:1935872/101‑1 (MQ=255)
cccGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATCCGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTc < 2:2022964/100‑1 (MQ=255)
ccGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCg < 2:699342/101‑1 (MQ=255)
gACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGc > 1:1042844/1‑101 (MQ=255)
cGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGccc > 2:4227474/1‑101 (MQ=255)
gaaagacCCGCTTCTGGACTATCTCGAAAGCAAATCCGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGgccc < 2:3772809/99‑1 (MQ=255)
gaagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGccccc < 2:1592236/101‑1 (MQ=255)
aagaaCCGCTTCTGGACTATCTCGAAAGCAAATCCGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGcccccc < 2:2941493/101‑1 (MQ=255)
aagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGcccccc > 2:3556905/1‑101 (MQ=255)
aagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGcccccc < 1:4186169/101‑1 (MQ=255)
agaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCg > 2:1200108/1‑101 (MQ=255)
agaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCg < 2:391808/101‑1 (MQ=255)
caaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCgg > 1:4409732/2‑101 (MQ=255)
aaCCGCTTCTGGACTATCTCGAAAGCAAATCCGCCGCGATCTCCCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCggg < 1:1838521/101‑1 (MQ=255)
aaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCggg > 2:828201/1‑101 (MQ=255)
aCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGa > 2:2150703/1‑101 (MQ=255)
aCCGCTTCTGGACCATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGa < 1:3833070/101‑1 (MQ=255)
cGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGata < 1:3922143/101‑1 (MQ=38)
cGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGata > 1:1668066/1‑101 (MQ=255)
gCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGatat > 2:1965476/1‑101 (MQ=255)
tttCTGGTCTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAtt < 2:3397021/100‑1 (MQ=38)
cTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAtt > 2:2131235/1‑101 (MQ=38)
cTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAtt > 1:869585/1‑101 (MQ=38)
cTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAtt > 2:2009158/1‑101 (MQ=38)
ttCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGCTGCCTCTGCCGCCCCGGaacttt > 2:598852/1‑96 (MQ=255)
ttCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAttt > 1:2314266/1‑101 (MQ=38)
tCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTc > 1:1095140/1‑101 (MQ=38)
cTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCg > 2:386066/1‑101 (MQ=38)
cTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCg < 1:4237023/101‑1 (MQ=38)
cTATCTGGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCaa < 2:1157438/101‑1 (MQ=37)
tATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAg < 1:3450904/101‑1 (MQ=38)
tATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAg < 2:1471731/101‑1 (MQ=38)
aTCTCGAAAGCAAATCCGCCGCGATCTCCCGGCTTT.GAGGGCGGG.GGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGa < 2:1671512/101‑1 (MQ=25)
aTCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGa > 2:557793/1‑101 (MQ=38)
tctcGAAAGCAAATCGGCGGCGTTCTCCCGGCTTT.GAGGGC.GAGGGGGGGCG.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGAt < 1:1189995/101‑1 (MQ=21)
tctcGAAAGCAAATCCGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGAt < 1:4377154/101‑1 (MQ=37)
tctcGAAAGCAAATACGCCGCGATCTACCGGCTTT.GGGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGAt < 1:1982144/101‑1 (MQ=37)
tctcGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGAt < 2:4030771/101‑1 (MQ=37)
ctcGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATg > 2:4188133/1‑101 (MQ=37)
tcGAAAGCAAATACGCCGCGATCTCCCGGCTTT.GGGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGa < 1:875283/101‑1 (MQ=37)
cGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaa > 1:772345/1‑101 (MQ=37)
cGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaa > 1:719791/1‑101 (MQ=37)
gAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaaa > 2:3997925/1‑101 (MQ=37)
aaaGCAAATGCGCCGCGATCTCCCGGTTTG.GAGGGC.GAGGGGGCGCT.GCCGCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAg < 1:2438197/101‑1 (MQ=21)
aaaGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAg > 2:231992/1‑101 (MQ=37)
aaGAAAATACGCCGCGATCTACCGGCTTT.GGGGGC.GACGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAgg < 1:3104572/101‑1 (MQ=37)
aGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGc < 1:266295/101‑1 (MQ=38)
gCAAATGCGCCGCCATCTACCGGCTTT.GGGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCa < 1:1863089/101‑1 (MQ=25)
cAAATCCGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCAt < 2:1928928/101‑1 (MQ=37)
cAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCAt > 2:3265180/1‑101 (MQ=37)
aaaaTCCCCCGCGATCTCCGGGTTTG.GAGGGCGGG.GGGGCGCC.CCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCAt < 1:498498/100‑1 (MQ=16)
aagtACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATc > 1:2555887/4‑101 (MQ=37)
aaaTACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGACATTTCGAGCAAGATGAAAGGCATc > 1:1260790/1‑101 (MQ=38)
atccgccgcGATCTCCCGGCTTT.GGGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCg < 1:3224992/98‑1 (MQ=25)
aTACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCg < 2:1502949/101‑1 (MQ=38)
aTACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCg > 2:3935767/1‑101 (MQ=37)
tACGCCGCGATCTCCCGGCTTG.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCgg < 2:957760/101‑1 (MQ=37)
tACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCgg > 2:2707261/1‑101 (MQ=37)
ccccgccccaCCGGCTTG.GGGGGC.GA.GGGGGCCC.GCCCCCCGCCGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTc < 1:3780176/92‑1 (MQ=21)
cgcgATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGGCTCGGTCCCCCGTGATATTTCGAGCCAGATGAAAGGCATCCGGtttaa > 2:1080958/1‑99 (MQ=25)
gcgATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCAt > 1:3489667/1‑101 (MQ=37)
cgATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATc > 1:1723883/1‑101 (MQ=37)
gATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCt < 2:1846174/101‑1 (MQ=37)
aTCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCtt > 1:3067087/1‑101 (MQ=25)
tCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCTGTTTCATCTTg > 1:1379178/1‑101 (MQ=25)
tCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTg > 1:363956/1‑101 (MQ=25)
cTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAATATGAAAGGCATCCGGTTTCATCTTGc > 1:3369866/1‑101 (MQ=25)
tgccGGCTTT.GGGGGC.GA.GGGG.GCTCCCCCCCCGCCGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCt < 1:1965605/99‑1 (MQ=18)
aCCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGAATCCGGTTTCATCTTGCtt > 1:2227801/1‑101 (MQ=25)
ccGGTTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTc < 1:653359/101‑1 (MQ=25)
ccGGCTTTGGGGGGG.GG.GGGGCGCG.GCCCCCGC.GGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTc < 1:3869579/101‑1 (MQ=18)
ggCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCaa > 2:3066202/1‑101 (MQ=25)
cTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAAt > 1:1022396/1‑101 (MQ=25)
t.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATAcc < 1:2602701/101‑1 (MQ=25)
|
GCGCGAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.GGGGCGCT.GCCCCCCG.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCG > NC_014034/1740667‑1740863
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|