| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,740,769 | +G | 97.5% | intergenic (+6/+129) | cxp → / ← RCAP_rcc01610 | thermostable carboxypeptidase 1/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,740,769 | 1 | .→G | 97.5% | 4.9 ‑3.0 ‑0.2 | 160 | intergenic (+6/+129) | cxp/RCAP_rcc01610 | thermostable carboxypeptidase 1/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (83/72): ref base (0/4): total (83/77) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.00e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.41e-01 | ||||||||||
Only 100 of 186 total aligned reads displayed.
GCGAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.GGGGCGCT.GCCCCCCG.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCG > NC_014034/1740669‑1740863
|
gcgAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.Ga < 1:3057491/101‑1 (MQ=255)
ggagaGGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.g < 2:3496469/100‑1 (MQ=255)
cgAGACGACCGTGGCCGCCTGCGGTTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.g < 1:3229986/101‑1 (MQ=255)
gagaCGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.gg > 1:2828798/1‑101 (MQ=255)
agaCGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.ggg > 2:860567/1‑101 (MQ=255)
agaCGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.ggg > 2:1935743/1‑101 (MQ=255)
aCGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.ggggg > 2:3073347/1‑100 (MQ=255)
cGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.gggggc < 2:2725201/101‑3 (MQ=255)
cGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.g > 2:3950488/1‑101 (MQ=255)
cGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.g > 2:1842027/1‑101 (MQ=255)
gTGCCCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gc < 1:2962826/101‑1 (MQ=255)
gTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gc > 1:2932177/1‑101 (MQ=255)
ccGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gccccc < 1:2466878/101‑1 (MQ=255)
ccGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gccccc < 2:3201063/101‑1 (MQ=255)
cGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATATGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccg < 2:217295/101‑2 (MQ=255)
gCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgc < 2:310445/101‑3 (MQ=255)
ccTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgcc < 2:2147682/101‑4 (MQ=255)
cggggggTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgccg < 1:2615235/97‑5 (MQ=255)
cTGCGGTTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgccg < 2:140894/101‑5 (MQ=255)
cTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgccg > 2:3382216/1‑97 (MQ=255)
cTGCGGGTGCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATGCGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgccg < 2:1021111/101‑5 (MQ=255)
tGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.Gcccccgccga > 1:1598597/1‑96 (MQ=255)
gggTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGGGCT.GCCCCCGC.CGAGGc > 2:1189904/1‑101 (MQ=255)
ggTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCACCCGC.CGAGGCg > 2:255495/1‑101 (MQ=255)
gTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGa > 2:2684494/1‑101 (MQ=255)
ttCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGAt > 2:2253122/1‑101 (MQ=255)
aGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCt > 2:1226908/1‑101 (MQ=255)
aGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCt < 2:3001334/101‑1 (MQ=255)
aGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCt > 1:3096914/1‑101 (MQ=255)
gCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTCCCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTc < 2:1472956/101‑1 (MQ=255)
gCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTc < 1:1935872/101‑1 (MQ=255)
ccGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCg < 2:699342/101‑1 (MQ=255)
gACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGc > 1:1042844/1‑101 (MQ=255)
cGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGccc > 2:4227474/1‑101 (MQ=255)
ggAAGAACCGCTTCTGGACTATCTCGAAAGCAAAGACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGcccc < 1:1729493/101‑1 (MQ=255)
gaagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGccccc < 2:1592236/101‑1 (MQ=255)
agaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCg > 2:1200108/1‑101 (MQ=255)
agaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCg < 2:391808/101‑1 (MQ=255)
caaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCgg > 1:4409732/2‑101 (MQ=255)
aaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCggg > 2:828201/1‑101 (MQ=255)
aCCGCTTCTGGACCATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGa < 1:3833070/101‑1 (MQ=255)
cGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGata < 1:3922143/101‑1 (MQ=38)
cGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGata > 1:1668066/1‑101 (MQ=255)
cTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAtt < 1:1719301/101‑1 (MQ=38)
cTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAtt > 1:869585/1‑101 (MQ=38)
ttCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGCTGCCTCTGCCGCCCCGGaacttt > 2:598852/1‑96 (MQ=255)
ttCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAttt > 1:2314266/1‑101 (MQ=38)
tCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTc > 1:1095140/1‑101 (MQ=38)
cTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCg < 1:4237023/101‑1 (MQ=38)
cTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCg > 2:386066/1‑101 (MQ=38)
cTGGACTATCTCGAAAGAAAATCCGCCGCAATCTACCGGCTTT.GAGGGC.GAGGGGGCGCG.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCg < 2:4108684/101‑1 (MQ=37)
tGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGa > 1:4200729/1‑101 (MQ=38)
cTATCTGGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCaa < 2:1157438/101‑1 (MQ=37)
tATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAg < 1:3450904/101‑1 (MQ=38)
aTCTCGAAAGCAAATCCGCCGCGATCTCCCGGCTTT.GAGGGCGGG.GGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGa < 2:1671512/101‑1 (MQ=25)
aTCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGa > 2:557793/1‑101 (MQ=38)
aTCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGa > 2:1979814/1‑101 (MQ=38)
tctcGAAAGCAAATCGGCGGCGTTCTCCCGGCTTT.GAGGGC.GAGGGGGGGCG.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGAt < 1:1189995/101‑1 (MQ=21)
tctcGAAAGCAAATCCGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGAt < 1:4377154/101‑1 (MQ=37)
tctcGAAAGCAAATACGCCGCGATCTACCGGCTTT.GGGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGAt < 1:1982144/101‑1 (MQ=37)
tcGAAAGCAAATACGCCGCGATCTCCCGGCTTT.GGGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGa < 1:875283/101‑1 (MQ=37)
cGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaa > 1:719791/1‑101 (MQ=37)
cGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaa > 1:772345/1‑101 (MQ=37)
gAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaaa > 1:2097882/1‑101 (MQ=37)
gAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaaa > 2:3997925/1‑101 (MQ=37)
aaaGCAAATGCGCCGCGATCTCCCGGTTTG.GAGGGC.GAGGGGGCGCT.GCCGCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAg < 1:2438197/101‑1 (MQ=21)
aGCAAATCCGCCGCGATCTACCGGCTTG.GAGGGC.GAGGGGGCGCC.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGc < 2:3660395/101‑1 (MQ=37)
aGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGc < 1:266295/101‑1 (MQ=38)
aGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGc < 2:2399871/101‑1 (MQ=38)
gCAAATGCGCCGCCATCTACCGGCTTT.GGGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCa < 1:1863089/101‑1 (MQ=25)
cAAATCCGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCAt < 2:1928928/101‑1 (MQ=37)
aaaaTCCCCCGCGATCTCCGGGTTTG.GAGGGCGGG.GGGGCGCC.CCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCAt < 1:498498/100‑1 (MQ=16)
aagtACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATc > 1:2555887/4‑101 (MQ=37)
aaaTACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGACATTTCGAGCAAGATGAAAGGCATc > 1:1260790/1‑101 (MQ=38)
aaaCACGCCGCGATCGAGCGGCTTG.GAGGGC.GAGGGGGCCGT.GCCCCCGT.CGAGGCGATGCCTCGGGCCCCCGGGATATTTCGAGCAAGATGAAAGGCATc < 1:3687793/101‑1 (MQ=21)
atccgccgcGATCTACCGGCTTG.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCg < 2:228001/98‑1 (MQ=37)
aTACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTTGAGCAAGAAGaaaaagaaccg > 1:2609799/1‑93 (MQ=25)
aTACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCCAGATGAAAGGCATCCg > 1:3177060/1‑101 (MQ=37)
aTACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCg > 2:3935767/1‑101 (MQ=37)
aTACGCCGCGATCTACCGGCTTG.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCg < 2:2069295/101‑1 (MQ=37)
tACGCCGCGATCTCCCGGCTTG.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCgg < 2:957760/101‑1 (MQ=37)
tACGCCGCGATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCgg > 1:168708/1‑101 (MQ=37)
ccccgccccaCCGGCTTG.GGGGGC.GA.GGGGGCCC.GCCCCCCGCCGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTc < 1:3780176/92‑1 (MQ=21)
cgcgATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGGCTCGGTCCCCCGTGATATTTCGAGCCAGATGAAAGGCATCCGGtttaa > 2:1080958/1‑99 (MQ=25)
gcgATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCAt > 1:3489667/1‑101 (MQ=37)
gcgATCGACCGGCTTT.GGGGGC.GAGGGGGCGCT.CCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCAt < 2:3713330/101‑1 (MQ=25)
gATCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCt < 2:1846174/101‑1 (MQ=37)
aTCTACCGGCTTT.GAGGGCGGG.GGGGCGCG.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCtt < 2:419930/101‑1 (MQ=25)
aTCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCtt > 1:3067087/1‑101 (MQ=25)
tCTACCGGCTTT.GAGGGCGGG.GGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTg < 2:2010174/101‑1 (MQ=25)
tCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCTGTTTCATCTTg > 1:1379178/1‑101 (MQ=25)
tCTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTg > 1:363956/1‑101 (MQ=25)
cTACCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAATATGAAAGGCATCCGGTTTCATCTTGc > 1:3369866/1‑101 (MQ=25)
tgccGGCTTT.GGGGGC.GA.GGGG.GCTCCCCCCCCGCCGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCt < 1:1965605/99‑1 (MQ=18)
aCCGGCTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGAATCCGGTTTCATCTTGCtt > 1:2227801/1‑101 (MQ=25)
ccGGTTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTc < 1:653359/101‑1 (MQ=25)
ccGGCTTTGGGGGGG.GG.GGGGCGCG.GCCCCCGC.GGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTc < 1:3869579/101‑1 (MQ=18)
cTTT.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAAt > 1:1022396/1‑101 (MQ=25)
tt.GAGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCGCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATAc > 2:3851773/1‑101 (MQ=25)
aGGGC.GAGGGGGCGCT.GCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTc > 1:4079193/1‑101 (MQ=25)
|
GCGAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTT.GAGGGC.GA.GGGGCGCT.GCCCCCCG.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCG > NC_014034/1740669‑1740863
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|