| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,820,393 | +C | 2.0% | intergenic (+84/‑102) | RCAP_rcc01683 → / → RCAP_rcc01684 | terminase‑like family protein/HK97 family phage portal protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,820,393 | 2 | .→C | 2.0% | 2.3 ‑4.2 ‑0.1 | 152 | intergenic (+84/‑102) | RCAP_rcc01683/RCAP_rcc01684 | terminase‑like family protein/HK97 family phage portal protein |
| Reads supporting (aligned to +/- strand): new base (0/3): ref base (114/35): total (114/38) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.47e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.23e-01 | ||||||||||
Only 100 of 184 total aligned reads displayed.
AGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACGG > NC_014034/1820293‑1820493
|
aGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGaaa > 2:1327494/1‑101 (MQ=255)
aGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGaaa > 2:4303478/1‑101 (MQ=255)
aGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGaaa > 2:411574/1‑101 (MQ=255)
gttGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..c > 1:1260981/3‑101 (MQ=255)
gTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..cc > 1:3551443/1‑101 (MQ=255)
tGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..ccc > 1:3359082/1‑101 (MQ=255)
gcgGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCg > 2:630678/1‑101 (MQ=255)
gcgGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCg > 2:3599923/1‑101 (MQ=255)
cgGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGc > 2:360361/1‑101 (MQ=255)
gggCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCt > 1:2125009/1‑101 (MQ=255)
gggCTTGGAGCGCGAAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTTTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTAAAA..CCTTCGCt < 2:911143/101‑1 (MQ=25)
ggCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAC..CCCCCGCtt < 2:2478841/101‑1 (MQ=255)
ggCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCtt > 1:119923/1‑101 (MQ=255)
gCTTTGAGCGCGCAAGGGCTTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTAAAAATACGCCAGGGGGGTGCGGGGG.TGTGAAC..CCCCCGCTTc < 2:3512566/101‑1 (MQ=25)
gCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTc > 1:1699460/1‑101 (MQ=255)
tttGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTg > 1:3458268/1‑101 (MQ=255)
tttGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTg > 1:934770/1‑101 (MQ=255)
tttGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTg > 2:2417924/1‑101 (MQ=255)
tttGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTg > 2:3458263/1‑101 (MQ=255)
ttGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGc > 2:2336166/1‑101 (MQ=255)
gcgcgcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAC..CCCCCGCTTCTGCcgcg < 2:765484/101‑1 (MQ=255)
gcgcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGa > 1:3897336/1‑101 (MQ=255)
gcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGaaa > 2:2067941/1‑101 (MQ=255)
gcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGaaa > 1:1006490/1‑101 (MQ=255)
aaGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATc > 2:1876504/1‑101 (MQ=255)
gggCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTg > 2:1666875/1‑101 (MQ=255)
gCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGt > 2:598638/1‑101 (MQ=255)
gCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGt > 2:1224387/1‑101 (MQ=255)
cGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTc > 1:3919258/1‑101 (MQ=255)
gTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCg > 2:3649147/1‑101 (MQ=255)
gTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCg > 1:2848314/1‑101 (MQ=255)
gTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCg > 1:963863/1‑101 (MQ=255)
aTTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGaa > 1:3607004/1‑101 (MQ=255)
aTTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGaa > 2:1518603/1‑101 (MQ=255)
aTTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGaa > 1:669095/1‑101 (MQ=255)
ttGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATCCGCCGCGGGGTGGGGGGGG.TGTAAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAg < 2:2993713/101‑1 (MQ=37)
tGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAgg < 2:770746/101‑1 (MQ=255)
ccAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCGGGGGGGTGCGGGGG.TGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCg < 2:1440871/101‑1 (MQ=255)
ccAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCg > 2:1055522/1‑101 (MQ=255)
cAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CGCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCgg > 1:3104456/1‑101 (MQ=255)
cAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCgg > 1:211442/1‑101 (MQ=255)
aGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCggg > 2:3407278/1‑101 (MQ=255)
gAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGt > 2:21843/1‑101 (MQ=255)
aaaaaGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGtt > 1:1812228/1‑101 (MQ=255)
aaaaaGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTATGCCGCGGAAATCTGGTCGAAAGGGTCgggggt > 1:3802051/1‑99 (MQ=255)
aaaaGCTGCGTGTTTTTTCTGGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGttt < 2:4413325/101‑1 (MQ=255)
aaaGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGtttt > 1:4203781/1‑101 (MQ=255)
aaaGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGtttt > 2:3437464/1‑101 (MQ=255)
aaaGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGGGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGtttt > 1:627640/1‑101 (MQ=255)
aaGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTc > 1:2263708/1‑101 (MQ=255)
aaGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGGGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTc > 1:4388122/1‑101 (MQ=255)
aGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTcc > 1:4245277/1‑101 (MQ=255)
aGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTcc > 1:1517507/1‑101 (MQ=255)
aGCGGCGTTTTTTTTCTGGGTGAAAATACCCCGCGGGGGTGCGGGGG.TTTAAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTcc < 2:2600597/101‑1 (MQ=255)
gCTGGGTTTTTTTTTTTGGAAAAAATACGCCGGGGGGGGGGGGGGG.TGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGCCGGGGTTTTccc < 1:2416243/101‑1 (MQ=255)
gCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTccc > 2:1892335/1‑101 (MQ=255)
agtttgtgtTTTTTTTTTGGGAAAAAAGGCCCGGGGGGGGGGGGGG.GTTGAAACCCCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTc < 1:809904/96‑1 (MQ=255)
cTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCg > 2:1726855/1‑101 (MQ=255)
ggtgttttttttCTGGGAAAAAATACGCCGGGGGGGGGGGGGGG.TGTAAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCgg < 1:470489/95‑1 (MQ=255)
gCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGc > 2:3217983/1‑101 (MQ=255)
cGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGCCGGGGTTTTCCCGGcc > 2:1795203/1‑101 (MQ=255)
tttttCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtttt > 1:2567794/1‑101 (MQ=255)
tttttCTTGCTAAAAATCCCCCCAGGGGGGGCGGGGG.TGAAACA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtttt < 2:2424570/101‑1 (MQ=255)
tttttCTGGGTAAAAACCCGCGGGGGGGGCGGGGGGG.TGGGACC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtttt < 1:630746/101‑1 (MQ=255)
tttCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTc < 1:3633224/101‑1 (MQ=255)
tCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCtt > 2:14089/1‑101 (MQ=255)
ttGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTg > 2:2144309/1‑101 (MQ=255)
tGGTGAAAATCCGCCAGGGGGGTGCGGGGG.TGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTgg < 2:3685711/101‑1 (MQ=255)
tGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCACGGCCCTTTTTCTTTgg > 1:4097103/1‑101 (MQ=255)
tGGTGAAAAACCCCCGCGGGGGGGGGGGGGTTGAAAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTg < 2:1701039/101‑1 (MQ=255)
ggagAAAAGCCGCCCGGGGGGTGCGGGGT.TGGGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGc < 1:1327591/98‑1 (MQ=255)
gtaaaaaTACGCCCCGGGGGTGCGGGGG.TGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGcc < 2:2684176/98‑1 (MQ=255)
tGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCg > 1:1892716/1‑101 (MQ=255)
gAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCgg > 2:2260712/1‑101 (MQ=255)
aaaaTACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCggg > 1:4421475/1‑101 (MQ=255)
aaaTACGCCACGGGGGTGTGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCgggg < 2:2960070/101‑1 (MQ=255)
aaaTACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCgggg > 2:3108731/1‑101 (MQ=255)
aaaTACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCgggg > 1:2075215/1‑101 (MQ=255)
aaTACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGc > 1:2780776/1‑101 (MQ=255)
accggcgggggggggggggggg.tgGAAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGcc < 1:1072371/92‑1 (MQ=255)
cgcgcgggggggggggggggg.tgGAACC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCt < 2:2561527/93‑1 (MQ=255)
aCGCCGGGGGGGGGGGGGGG.TGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCtt < 1:4224776/101‑1 (MQ=255)
gCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgg > 1:1012469/1‑101 (MQ=255)
gCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgg > 2:4025605/1‑101 (MQ=255)
cgcccggggctgcggggg.tgTTAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgg < 2:4270374/97‑1 (MQ=255)
ccACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTggg > 2:3578226/1‑101 (MQ=255)
cACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggc > 1:3635131/1‑101 (MQ=255)
gggggtgtggggg.tgTACAC..CCCCTGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccgg < 2:4387850/101‑1 (MQ=255)
gggggtgcggggg.tgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccgg > 2:1850708/1‑101 (MQ=255)
ggggggggggg.tgCGACC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccgggc < 2:669027/95‑1 (MQ=255)
ggtggggggg.tgCAACC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccgggcc < 2:3358845/101‑1 (MQ=255)
gtgcggggg.tgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGggccgggccg > 1:1539178/1‑101 (MQ=255)
ggggggg.tgTAAAC..CCCCTGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCcgcg < 2:2440088/99‑1 (MQ=255)
ggggg.tgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGcgac > 2:2455398/1‑101 (MQ=255)
ggggg.agTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGcgac > 2:1987177/1‑101 (MQ=255)
gggg.tgTAACC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGcgacg < 2:445243/101‑1 (MQ=255)
g.tgtGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgagg > 2:558827/1‑101 (MQ=255)
gAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgaggagca > 2:3283319/1‑99 (MQ=255)
gAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGaa > 1:2191974/1‑101 (MQ=255)
a..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACgg > 2:3917793/1‑101 (MQ=255)
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AGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATACGCCACGGGGGTGCGGGGG.TGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACGG > NC_014034/1820293‑1820493
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|