| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,040,428 | +C | 98.3% | intergenic (‑176/‑212) | RCAP_rcc01888 ← / → RCAP_rcc01889 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,040,428 | 1 | .→C | 98.3% | 3.2 0.0 ‑1.8 | 233 | intergenic (‑176/‑212) | RCAP_rcc01888/RCAP_rcc01889 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (97/132): ref base (2/2): total (99/134) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.47e-02 | ||||||||||
Only 100 of 251 total aligned reads displayed.
GCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GG.C.GCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCA > NC_014034/2040326‑2040525
|
gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.gg < 2:3674169/101‑1 (MQ=255)
gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.gg > 1:2664289/1‑101 (MQ=255)
gtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.Gg.ccgcgc < 1:981880/99‑6 (MQ=255)
tgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGcc < 1:585279/100‑1 (MQ=255)
tgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGcc > 1:313651/2‑101 (MQ=255)
gggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCa < 2:1027382/101‑1 (MQ=255)
gggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCa < 1:4314540/101‑1 (MQ=255)
gggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCa < 1:3031752/101‑1 (MQ=255)
gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATa > 2:4196161/1‑101 (MQ=255)
gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATa < 2:1308429/101‑1 (MQ=255)
gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATa < 2:244809/101‑1 (MQ=255)
aTCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAA.GGCC.GCGGCATAAGt > 2:1333716/1‑101 (MQ=255)
gccGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTg < 2:2815790/100‑1 (MQ=255)
gccGGTAGAAGGTCAGACGTTGTGCAAAAGC.CCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCTGCCGCAAA.GGCC.GCGCCATAAGTg < 2:2149204/100‑1 (MQ=255)
ccGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGa < 2:2125946/101‑1 (MQ=255)
cGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAg < 2:3561154/101‑1 (MQ=255)
cGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAA.GGAC.GCGCCATAAGTGAg > 2:1532962/1‑101 (MQ=255)
ggTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGc < 2:2696558/101‑1 (MQ=255)
ggTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGc > 2:2629649/1‑101 (MQ=255)
gTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGcc > 2:2351103/1‑101 (MQ=255)
cGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCa < 2:3240908/101‑1 (MQ=255)
aaGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCAcc < 2:2597847/101‑1 (MQ=255)
aaGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCAcc < 1:1663442/101‑1 (MQ=255)
aaGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCAcc < 1:2778557/101‑1 (MQ=255)
aGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCAccg < 1:2304063/101‑2 (MQ=255)
aGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCAccg > 2:56415/1‑100 (MQ=255)
ggTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCAccgg > 2:1628025/1‑99 (MQ=255)
ggTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCAccgg > 2:1374663/1‑99 (MQ=255)
gTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCAccggt < 1:3880398/101‑4 (MQ=255)
gTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAA.GGCC.GCGCCATAAGTTAGCCCAccggt > 2:474173/1‑98 (MQ=255)
tCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCAccggtt < 2:2263298/101‑5 (MQ=255)
tCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCAccggtt > 2:1759007/1‑97 (MQ=255)
aGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCg > 2:3144760/1‑101 (MQ=255)
gTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAgg > 1:3284988/1‑101 (MQ=255)
tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggtt < 1:3783343/101‑3 (MQ=255)
tgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttgg < 1:3495859/101‑5 (MQ=255)
tgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttgg < 2:4238664/101‑5 (MQ=255)
tgCAAAAGCA.CCGGGGCGGATGGCTTAAGCGGTATGGCGCGTGCCAAAGACGTAGGCCGCAAACGC.C.GCGCCATAAGTGAGCCCA.CTGGTTCGGAggttgg > 2:2978642/1‑97 (MQ=255)
gCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGa < 1:2393960/101‑1 (MQ=255)
gCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGa > 2:767863/1‑101 (MQ=255)
cAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAGGGtggat > 1:3157899/1‑97 (MQ=255)
aaaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATg < 1:1776051/101‑1 (MQ=255)
aaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGc > 1:2692113/1‑101 (MQ=255)
gcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATa > 1:2258681/4‑101 (MQ=255)
accGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATaaa > 1:2386149/2‑101 (MQ=255)
ccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAAt < 1:4184034/101‑1 (MQ=255)
ccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAAt < 1:1413900/101‑1 (MQ=255)
ccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAAt < 1:152365/101‑1 (MQ=255)
cGGGTCTGATGGCTTACGCGGTATGGCGCGTGCCACAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATc < 2:3004593/101‑1 (MQ=255)
ggggCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCg > 2:946594/1‑101 (MQ=255)
ggggCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCg > 1:194937/1‑101 (MQ=255)
cGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCAt < 1:2069680/101‑1 (MQ=255)
ggATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATg < 1:187580/101‑1 (MQ=255)
ggATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATg > 1:51859/1‑101 (MQ=255)
gtGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGAt < 1:4118671/100‑1 (MQ=255)
aTGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGAt < 1:650235/101‑1 (MQ=255)
ggCTTACGCGGTATGGCGCGTGCCAACGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATcc < 1:3736336/101‑1 (MQ=255)
ggCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATcc > 2:508055/1‑101 (MQ=255)
gCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCg < 1:2836783/101‑1 (MQ=255)
cTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGc < 2:1805169/101‑1 (MQ=255)
tACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGccc < 2:856842/101‑1 (MQ=255)
tACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGccc < 2:25175/101‑1 (MQ=255)
aCGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGccct < 2:403891/101‑1 (MQ=255)
cgcgGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGccctc < 2:1971002/101‑1 (MQ=255)
cgcgGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGccctc < 2:2296936/101‑1 (MQ=255)
gTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGATGGATGCATAAATCGTCATGATCCGccctccctc > 2:1297734/1‑100 (MQ=255)
tATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGt < 1:2625730/101‑1 (MQ=255)
tGGCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCt < 1:2821552/101‑1 (MQ=255)
ggCGCGTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTg < 1:1311481/101‑1 (MQ=255)
cgcgTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGaa < 1:4065430/101‑1 (MQ=255)
gcgTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAAt < 2:3451016/101‑1 (MQ=255)
gcgTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCGGAAt < 2:3766917/101‑1 (MQ=255)
cgTGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAAtt < 1:4196422/101‑1 (MQ=255)
tGCCAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGc < 1:1250437/101‑1 (MQ=255)
ccAAAGACGTCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCg < 2:3903390/101‑1 (MQ=255)
cAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCgg < 1:2351253/101‑1 (MQ=255)
cAAAGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCgg < 1:4221628/101‑1 (MQ=255)
aaaGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGa > 1:1015700/1‑101 (MQ=255)
aaaGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGa > 2:1713826/1‑101 (MQ=255)
aaGACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGAt > 2:2358127/1‑101 (MQ=255)
gACGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGc < 2:1846027/101‑1 (MQ=255)
aCGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCg < 1:1038784/101‑1 (MQ=255)
aCGGCGGCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCg < 2:3716115/101‑1 (MQ=255)
cggcggCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCgg < 1:1158795/101‑1 (MQ=255)
cggcggCCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCgg < 1:1781339/101‑1 (MQ=255)
ggcggcCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCggg > 2:1133546/1‑101 (MQ=255)
ggcggcCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCggg > 2:3370606/1‑101 (MQ=255)
ggcCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCaa > 1:4305417/1‑101 (MQ=255)
ggcCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCaa < 1:4268077/101‑1 (MQ=255)
ggcCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCaa > 1:925413/1‑101 (MQ=255)
gcCGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCaaa > 1:3919796/1‑101 (MQ=255)
cGCAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAAt > 2:584828/1‑101 (MQ=255)
cGCAAA.GG.CTGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAAt < 1:827146/101‑1 (MQ=255)
cAAA.GGCC.GCGCGATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGc > 1:3192339/1‑101 (MQ=255)
cAAA.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGc < 2:4279586/101‑1 (MQ=255)
aaa.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCa > 2:3882703/1‑101 (MQ=255)
aaa.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCa > 2:3995725/1‑101 (MQ=255)
aaa.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCa > 1:476832/1‑101 (MQ=255)
aaa.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCa < 2:4141195/101‑1 (MQ=255)
aaa.GGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCa < 2:1978750/101‑1 (MQ=255)
|
GCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAA.GG.C.GCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCA > NC_014034/2040326‑2040525
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 40 ≤
ATCG
|