BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,478,633	+C	100%	intergenic (‑94/+163)	RCAP_rcc02304 ← / ← RCAP_rcc02305	hypothetical protein/heme ABC transporter ATP‑binding/permease

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,478,633	1	.→C	100.0%	646.6	180	intergenic (‑94/+163)	RCAP_rcc02304/RCAP_rcc02305	hypothetical protein/heme ABC transporter ATP‑binding/permease
Reads supporting (aligned to +/- strand): new base (75/104): ref base (0/1): total (75/105)

Only 100 of 206 total aligned reads displayed.


GATCCACGCCGGGCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTG...C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAATATCCCGGGGGG  >  NC_014034/2478533‑2478728


    cACGCCGGGCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTG...c.cc.c                                                                                               >  2:703451/1‑101 (MQ=255)


    cACGCCGGGCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTG...c.cc.c                                                                                               >  2:2369708/1‑101 (MQ=255)


     aCGCCGGGCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAGCCGATGCCCCGGTCACGAAGGGGGGGGGGCTG...c.cc.cc                                                                                              >  1:3809647/1‑101 (MQ=255)


      cGCCGGGCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTG...c.cc.ccc                                                                                             <  2:3209026/101‑2 (MQ=255)


       gCCGGGCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTG...c.cc.cccg                                                                                            <  1:1363709/101‑3 (MQ=255)


       gCCGGGCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTG...c.cc.cccg                                                                                            <  2:1322757/101‑3 (MQ=255)


       gCCGGGCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTG...c.cc.cccg                                                                                            <  2:1522855/101‑3 (MQ=255)


          gggCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTG...c.cc.cccgtcc                                                                                         <  2:3012367/101‑6 (MQ=255)


           ggCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCg                                                                                         <  2:3554908/101‑1 (MQ=255)


           ggCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCg                                                                                         >  2:966759/1‑101 (MQ=255)


            gCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGc                                                                                        <  2:817522/101‑1 (MQ=255)


             ctcctcGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCa                                                                                       >  1:1136195/1‑101 (MQ=255)


              tcctcGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCaa                                                                                      <  1:3047726/101‑1 (MQ=255)


              tcctcGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCaa                                                                                      <  1:2555154/101‑1 (MQ=255)


                ctcGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGc                                                                                    <  1:4028775/101‑1 (MQ=255)


                ctcGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGc                                                                                    <  1:2986567/101‑1 (MQ=255)


                   gTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGa                                                                                 >  2:2292580/1‑101 (MQ=255)


                   gTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCCCCAGCGGa                                                                                 >  1:343690/1‑101 (MQ=39)


                     cTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCCGC..C.CC.CCGTCCGCAAGCGGACg                                                                               >  1:2677963/1‑101 (MQ=255)


                       ttGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGGCGcc                                                                             >  1:3405919/1‑101 (MQ=255)


                              atctatACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGGGGGGGC.C.CC.CCGCCCGCCAGGGGAGGCCCCCCgg                                                                       >  1:871289/1‑101 (MQ=255)


                               tctatACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGGGCGGCGCC.CC.CCCCCCACACGCGCACGCCCCCCgg                                                                       >  2:3239853/1‑101 (MQ=255)


                                ctatACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGat                                                                    >  1:710412/1‑101 (MQ=255)


                                ctatACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGat                                                                    <  2:2594582/101‑1 (MQ=255)


                                ctatACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGat                                                                    <  2:4435363/101‑1 (MQ=255)


                                cgataCGCAAGCGCCCCCCCTTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGat                                                                    <  2:3618680/99‑1 (MQ=25)


                                 tatccgaagccccGCCCCATTGCCAGGCCCGGGAACCCGCTCCCCCGGTCACGAGGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGata                                                                   <  1:1610698/91‑1 (MQ=18)


                                 tataCGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCCGGgta                                                                   >  1:3120994/1‑101 (MQ=37)


                                  ataCGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGGGCTGC..C.CC.CCCTCCGCCAGCGGGCCCCCCCCCGGgta.t                                                                 >  2:2189125/1‑101 (MQ=255)


                                  ataCGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGata.t                                                                 <  2:1037149/101‑1 (MQ=255)


                                    ccgcagccccGCGCCATTGCAAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.ttt                                                               <  2:4087651/94‑1 (MQ=25)


                                     cGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCGCCGGGATA.TTTg                                                              <  1:2428608/101‑1 (MQ=255)


                                     cGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTg                                                              <  2:2478983/101‑1 (MQ=255)


                                     cGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGACGCTG...C.CCTCCGGCCGCAAGAGGACGCCCCCCGGGAGA.TTTg                                                              >  2:1757489/1‑101 (MQ=37)


                                      gCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGc                                                             >  2:2826819/1‑101 (MQ=255)


                                      gCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGc                                                             >  1:252357/1‑101 (MQ=255)


                                        aaGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCAc                                                           >  2:3343378/1‑101 (MQ=255)


                                        aaGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCAc                                                           <  1:126958/101‑1 (MQ=255)


                                          gCCCTCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCa                                                         <  2:2677641/101‑1 (MQ=255)


                                           cccGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCaa                                                        >  2:1122826/1‑101 (MQ=255)


                                            ccGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAg                                                       <  2:1716287/101‑1 (MQ=255)


                                            ccGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAg                                                       <  1:4188872/101‑1 (MQ=255)


                                             cgcgCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGGTA.TTTGCACCAAgg                                                      >  2:2221699/1‑101 (MQ=255)


                                              gcgcCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATC.TTTGCACCCAggg                                                     >  2:1461421/1‑100 (MQ=25)


                                               cgcCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTg                                                    <  2:2620000/101‑1 (MQ=255)


                                               cgcCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTg                                                    >  1:3494088/1‑101 (MQ=255)


                                                 ccATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGaa                                                  >  2:561052/1‑101 (MQ=255)


                                                 ccATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGaa                                                  <  1:406617/101‑1 (MQ=255)


                                                 ccATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGaa                                                  <  1:1375598/101‑1 (MQ=255)


                                                  cATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGaaa                                                 <  1:2043446/101‑1 (MQ=255)


                                                    ttGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAagc                                               <  1:2777722/101‑1 (MQ=255)


                                                    ttGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAAGGGAAagc                                               >  1:2891238/1‑101 (MQ=21)


                                                     tGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAagca                                              >  1:3347677/1‑101 (MQ=255)


                                                     tGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAagca                                              >  2:782060/1‑101 (MQ=255)


                                                     tGCCAAGACCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAagca                                              <  1:4246233/101‑1 (MQ=255)


                                                      gCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAagcag                                             <  1:254996/101‑1 (MQ=255)


                                                       ccAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCACGCGGACGCCCCCCGGGAAA.TTTGCACCAAGGTGAAagcagg                                            >  1:809271/1‑100 (MQ=21)


                                                       ccAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAagcagc                                            <  2:4192109/101‑1 (MQ=255)


                                                         aaGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAgcgc                                          >  1:3037150/1‑101 (MQ=255)


                                                          aGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGGGGTGC..C.CC.CCGTCCGCAAGCGGACGGCCCCCGGGGGA.TTTGCACCAAAGGGAAAGGAGCGcc                                         >  2:1403638/1‑101 (MQ=21)


                                                           ggCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGccc                                        <  2:1646387/101‑1 (MQ=255)


                                                           ggCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGccc                                        <  2:3394266/101‑1 (MQ=255)


                                                            gCCGGGAACCCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGcccc                                       <  2:3809394/101‑1 (MQ=255)


                                                            gCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGcccc                                       <  1:184563/101‑1 (MQ=255)


                                                             ccGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCg                                      <  2:2727862/101‑1 (MQ=255)


                                                              cGGGAAACCGCTGCCCAGGTCACGAAGGGGGGGGCGCTG...CTCC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCgg                                     <  2:743554/101‑1 (MQ=255)


                                                               gggAACCCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGt                                    <  2:310424/101‑1 (MQ=255)


                                                               gggAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCCGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGt                                    >  2:1001456/1‑101 (MQ=255)


                                                                 gAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGttt                                  <  2:3671883/101‑1 (MQ=255)


                                                                 gAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGttt                                  <  1:1111530/101‑1 (MQ=255)


                                                                  aaaCCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGtttc                                 >  1:3278042/1‑101 (MQ=255)


                                                                  aaaCCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGtttc                                 <  2:3743354/101‑1 (MQ=255)


                                                                   aaCCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGtttca                                <  1:537130/101‑1 (MQ=255)


                                                                   aaCCGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGtttca                                <  1:621561/101‑1 (MQ=255)


                                                                    aCCGCGGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGtttca.t                              <  1:2261172/101‑1 (MQ=255)


                                                                      cGCTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGtttca.ttt                            >  1:3192829/1‑101 (MQ=255)


                                                                        cTGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGtttca.tttca                          <  2:3053002/101‑1 (MQ=255)


                                                                         tGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCAc                         <  1:2718837/101‑1 (MQ=255)


                                                                         tGCCCCGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGGTTCA.TTTTAc                         >  2:1849368/1‑101 (MQ=18)


                                                                           ccccGGTCACGAAGGGGGGGGGGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGGAAGCAGCGCCCCGGTTTCA.TTTCACCt                       >  2:2146919/1‑101 (MQ=21)


                                                                             ccGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTg                     <  1:4448987/101‑1 (MQ=255)


                                                                             ccGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTg                     <  2:1245897/101‑1 (MQ=255)


                                                                              cGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTgg                    >  2:3773911/1‑101 (MQ=255)


                                                                              cGGTCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTgg                    <  1:4120609/101‑1 (MQ=255)


                                                                              cGGGCACGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTgg                    <  2:1184386/101‑1 (MQ=255)


                                                                               ggTCACGAAGGGGGGGGCGCTGC..C.CC.CCCTCCCCCAACGGGAGCCCCCCCGGGTATTTTCCACCAAGG.GAAAGGAGCGCCCCCGGTTCATTTTCACCtggc                    >  2:2796384/1‑98 (MQ=9)


                                                                                   aCGAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGaa               <  2:265186/101‑1 (MQ=255)


                                                                                     gAAGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAat             >  2:1959804/1‑101 (MQ=255)


                                                                                      aaGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAata            <  1:920421/101‑1 (MQ=255)


                                                                                      aaGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAata            >  2:1100432/1‑101 (MQ=255)


                                                                                      aaGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCCGTTTTA.ATTCGCCTTTGCCGaaaaa            >  2:2957943/1‑99 (MQ=17)


                                                                                       aGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAatat           <  2:252330/101‑1 (MQ=255)


                                                                                       aGGGGGGGGCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAatat           <  2:4122572/101‑1 (MQ=255)


                                                                                        ggggggggCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAATATc          >  2:87119/1‑101 (MQ=255)


                                                                                        ggggggggCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAATATc          >  1:4418099/1‑101 (MQ=255)


                                                                                            ggggCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAATATCCCgg      <  1:3861098/101‑1 (MQ=255)


                                                                                             gggCGCTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAATATCCCggg     >  1:1912847/1‑101 (MQ=255)


                                                                                               gcgcTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGTCCGAAATATCCCggggg   <  2:2419004/101‑1 (MQ=255)


                                                                                               gcgcTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAATATCCCggggg   <  1:2174194/101‑1 (MQ=255)


                                                                                                cgcTGC..C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAATATCCCgggggg  >  1:3939451/1‑101 (MQ=255)


GATCCACGCCGGGCTCCTCGTCTTTGGCCTATCTATACGCAAGCCCGCGCCATTGCCAAGGCCGGGAAACCGCTGCCCCGGTCACGAAGGGGGGGGCGCTG...C.CC.CCGTCCGCAAGCGGACGCCCCCCGGGATA.TTTGCACCAAGGTGAAAGCAGCGCCCCGGTTTCA.TTTCACCTTGGCCGAAATATCCCGGGGGG  >  NC_014034/2478533‑2478728

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG