| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,678,900 | +C | 100% | intergenic (+29/+58) | RCAP_rcc02495 → / ← RCAP_rcc02496 | GTPase, EngC family/group 1 glycosyl transferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,678,900 | 1 | .→C | 100.0% | 19.5 | 110 | intergenic (+29/+58) | RCAP_rcc02495/RCAP_rcc02496 | GTPase, EngC family/group 1 glycosyl transferase |
| Reads supporting (aligned to +/- strand): new base (64/37): ref base (0/8): total (65/45) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.67e-04 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.11e-01 | ||||||||||
Only 100 of 142 total aligned reads displayed.
GCCCGCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.CCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCG > NC_014034/2678800‑2678993
|
gCCCGCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.Cg < 1:3475967/101‑1 (MQ=255)
ccGCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.cc < 1:2151099/101‑1 (MQ=255)
cgcgACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.ccc > 1:1243792/1‑101 (MQ=255)
cgcgACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.ccc < 1:2781706/101‑1 (MQ=255)
cgcgACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGCGGGG.GCA.T.CG.ccc > 2:2618352/1‑101 (MQ=255)
ggccGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAAGCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.ccccca < 2:646659/99‑3 (MQ=255)
gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.cccccc > 2:3083563/1‑99 (MQ=255)
gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.ccccca > 2:4419174/1‑99 (MQ=255)
gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.ccccca > 2:1412429/1‑99 (MQ=255)
ccGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.cccccacc < 2:2740916/101‑5 (MQ=255)
cgcgCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.cccccaccg > 1:3033310/1‑96 (MQ=255)
cgcgCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.cccccaccg < 1:2864171/101‑6 (MQ=255)
gcgcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.Cc.gc > 2:1062684/1‑101 (MQ=255)
cgcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.Cc.gcg < 2:3918874/101‑1 (MQ=255)
cgcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.Cc.gcg < 2:2379495/101‑1 (MQ=255)
ccTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGcc < 2:2100443/101‑1 (MQ=255)
ccTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGcc > 2:4175443/1‑101 (MQ=255)
ctgcGGAAAGATGCCCGGGGCGGCGCTGCGCGACAAACCCCGGCGGCGCGGCGACTGACGCCGTTTCGGGGGCCGGTGGGG.GCA.T.CCCCCCCA.CC.GCGccc < 2:3975913/98‑1 (MQ=255)
cTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GGA.T.CGCCCCCC.CC.GCGccc > 2:3308641/1‑101 (MQ=255)
cTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTC.GGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCg > 1:188412/1‑101 (MQ=255)
ttCGGCAAGATGCCCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCg < 2:296479/101‑1 (MQ=255)
tCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCgc > 1:2952829/1‑100 (MQ=255)
ggCAAGATGCCCCGGGCGGCGCGCCGCGACAAACCCGGGCTGCGCGGCGACTGACGCCGTTTGGGGGGCGGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGAcg < 2:3740780/101‑1 (MQ=255)
ggCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGAcg > 2:1044296/1‑101 (MQ=255)
cAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGAcgcg > 1:4144419/1‑101 (MQ=255)
aaGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGAcgcgc > 2:3289362/1‑101 (MQ=255)
aaGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGAcgcgc < 1:4237464/101‑1 (MQ=255)
aaGACGCCCCGGGCGGCGCGCCGCAACAAACCCCGGCTGCGCGGGGACTGCCGCCGGTGGGGGGGCGGGGGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGAcgcgc < 2:2330145/101‑1 (MQ=255)
gATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCgcgg > 1:1161919/1‑101 (MQ=255)
aTGCCCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTGGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCgcggc < 1:3542994/101‑1 (MQ=255)
aCCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCggg < 2:4381238/101‑1 (MQ=255)
aCCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCggg > 2:883573/1‑101 (MQ=255)
cGGGGGGGGGTGCGCGAAAACCCCCGGCTGGGGGGCGCGTGACGCGGGTGGGGGGGCGGGGGGGG.GCACC.CC.CCCCC.CC.GCGCCCGACGCGCGGCGGGCtt < 1:4175704/101‑1 (MQ=9)
cGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCtt > 2:3723897/1‑101 (MQ=255)
gggGGGCGCTGCGCGACAAACCCCGGCTGCGCGGCGACTGACGCCGGTGGGGGGGCGGGGGGGG.GCA.TCCC.CCCCA.CC.GCGCCCGACGCGCGGCGGGCTTg < 1:3363637/101‑1 (MQ=25)
gcggcgCGGCGCGACAAACCCCGGCTGGGCGGCGCCTGCCGCCGGTTCGGGGGCGGGGGGGG.GCA.TCCC.CCCCA.CC.GCGCCCGACGCGCGGCGGGCTTgcc < 1:1036839/101‑1 (MQ=25)
gggcgCTGCGCGCAAACTCCCGGCGGGGGGGCGACTGACGCCGGTTGGGGGGCGGGGGGGG.GCA.TCCC.CCCCA.CC.GCGCCCGACGCGCGGCGGGCTTgccc < 1:8498/100‑1 (MQ=21)
ggcgCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCtttcacc > 1:2491952/1‑96 (MQ=255)
ggcgCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTgcccg > 1:207208/1‑101 (MQ=255)
cgcTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTgcccccc > 2:1632125/1‑101 (MQ=255)
gcTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTgcccgccc > 1:3991560/1‑101 (MQ=255)
gcTGCGCGACAAACCCCGGCTGCGCGGCGACTGGCGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTgcccgccc < 2:1219416/101‑1 (MQ=38)
cTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCCTGCCCGCCCa > 2:2243244/1‑101 (MQ=255)
cTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGGGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCa > 1:3945572/1‑101 (MQ=255)
gcgcGACAACTCCCGGCGGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAag < 2:1651678/101‑1 (MQ=37)
cgACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAaggag > 1:2669675/1‑101 (MQ=255)
caacgcccGGCGGCGCGGCGACGGCCGCCGGTTCGGGGGCCGGTGGGG.GCA.TCCC.CCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgc < 1:1812510/96‑1 (MQ=21)
cAAGTCCGGGCGGCGGGGCGGGGGGCGCGGGTCGGGGGGCGGGGGGGG.GCACC.CC.CCCCG.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgc < 1:1676270/101‑1 (MQ=2)
cAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgc < 1:1080953/101‑1 (MQ=255)
aaaTCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgcg < 2:4051866/101‑1 (MQ=255)
aaaTCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgcg > 2:3302730/1‑101 (MQ=255)
aaaTCCCGGCTGCGCGGCGACTGACGCCGGTGCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgcg < 1:3995523/101‑1 (MQ=255)
cccGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGcccc > 2:2719852/1‑101 (MQ=255)
cGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCg < 2:509078/101‑1 (MQ=255)
ggCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCTCGGCGGGCTTGCCCGCCCAAGGGGGGGGCCCCCgg > 1:1604858/1‑101 (MQ=37)
ggCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCgg > 1:2672605/1‑101 (MQ=255)
ggCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGACCCCgg > 1:3899851/1‑101 (MQ=255)
ggtggccggcgGCTGCCGCGGGTTGGGGGGCGGGGGGGGCCCC.C.CC.CCCCC.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGATGGCGCCCCCGGa < 1:3191330/95‑1 (MQ=9)
gCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGa > 1:3526311/1‑101 (MQ=255)
tGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAtc > 2:363940/1‑101 (MQ=255)
tGCGCGGCGACTGACACCGGTTCGGGGGCCGGGGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGCGGGCGGCCCCGGAtc > 2:380876/1‑101 (MQ=25)
ggcgcGGCGACTGCCGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAtc < 2:1161828/100‑1 (MQ=255)
gcgcGGCGGCTGACGCGGGGCCGGGGGCGGGGGGGG.GCACC.CC.CCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAtct < 2:1536036/101‑1 (MQ=18)
gcgcGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAtct < 2:4166797/101‑1 (MQ=255)
cggggcgACTGCCGCCGTTGGGGGGCCCGGGGGGG.GCACC.CC.CCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAtctc < 2:3097692/98‑1 (MQ=18)
cgcgGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAtctc > 1:1547778/1‑101 (MQ=255)
gcggcgACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCa < 1:3349680/101‑1 (MQ=255)
ggcgACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCCAGGAGGGCGCCCCCCGGTCTCAgc > 2:2259869/1‑101 (MQ=25)
ggcgACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAgc < 1:1412536/101‑1 (MQ=255)
ggcgACTGACGCCGGTTCGGGCGCCGGTGGGG.GCA.T.CC.CCCCACCC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAgc < 2:1764106/101‑1 (MQ=37)
cgACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAgcgc < 1:4419446/101‑1 (MQ=255)
gACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAgcccc > 2:431297/1‑98 (MQ=255)
gACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCa < 2:2944859/101‑1 (MQ=255)
cTGACCCCGCCTCGGGCGCCGGTGGTG.GCA.T.CG.CCCCC.CCTGCTCCCGACGCGCGGCGGGCGTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAAc < 2:2048453/101‑1 (MQ=21)
gcGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTg < 1:1062772/100‑1 (MQ=255)
aCGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTg < 1:2143905/101‑1 (MQ=255)
aCGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTg > 2:471645/1‑101 (MQ=255)
cGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCCGCGCAACGTgc > 2:1225687/1‑101 (MQ=255)
cGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgccgc > 2:3660208/1‑101 (MQ=255)
cGGTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACCTgccgc > 2:1143917/1‑101 (MQ=255)
ggTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgccgcc > 2:857735/1‑101 (MQ=255)
ggTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgccgcc < 1:4196954/101‑1 (MQ=255)
ggTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgccgcc > 2:228300/1‑101 (MQ=255)
ggTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgccgcc > 2:2759295/1‑101 (MQ=255)
gTTCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGccgccc > 1:4290695/1‑101 (MQ=255)
ttCGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGccgcccg < 2:2686016/101‑1 (MQ=255)
cGGGGGCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCcgcccgcc < 1:622479/101‑1 (MQ=255)
gggggCGGGGGGGG.GCC.C.CCCCCCCC.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCccgccg < 1:1632231/101‑1 (MQ=21)
gggggCCGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCccgccg < 2:1817639/101‑1 (MQ=255)
ggggCCGGTGGGG.CCA.C.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGt < 2:759030/101‑1 (MQ=25)
ccGGTGGGG.GCA.TCCC.CCCCC.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCg < 1:981939/101‑1 (MQ=25)
cGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGa > 1:249406/1‑101 (MQ=255)
cGGTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGCGCCGCCCGCCGTCTCGa > 1:848431/1‑101 (MQ=255)
ggTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGAc < 2:3613324/101‑1 (MQ=255)
ggTGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGAc > 2:1438199/1‑101 (MQ=255)
tGGGG.GCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACaa > 2:1337899/1‑101 (MQ=255)
gatg.gCA.T.CGTCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGCCTCggaaaa > 2:3418043/4‑96 (MQ=25)
ggg.gCA.C.CGCCCCCC.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAg < 2:3991304/101‑1 (MQ=25)
g.gCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCg > 2:4019956/1‑101 (MQ=255)
agCA.T.CGCCCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCg > 1:3904138/2‑101 (MQ=255)
|
GCCCGCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCA.T.CG.CCCCA.CC.GCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCG > NC_014034/2678800‑2678993
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 22 ≤
ATCG
< 32 ≤
ATCG
< 39 ≤
ATCG
|