Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,780,410 | +T | 2.4% | coding (980/1257 nt) | RCAP_rcc02591 ← | surface presentation of antigens protein family |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,780,410 | 1 | .→T | 2.4% | 9.0 ‑2.9 ‑0.3 | 165 | coding (980/1257 nt) | RCAP_rcc02591 | surface presentation of antigens protein family |
Reads supporting (aligned to +/- strand): new base (4/0): ref base (76/85): total (80/85) | ||||||||||
Fisher's exact test strand distribution p-value = 5.31e-02 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.71e-01 |
Only 100 of 181 total aligned reads displayed.
CAGACCGCCGCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCACCGCGCG > NC_014034/2780310‑2780510
|
cAGACCGCCGCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGc > 1:2148074/1‑101 (MQ=255)
aGACCGCCGCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.t < 1:2112144/101‑1 (MQ=255)
aGACCGCCGCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.t > 1:2589194/1‑101 (MQ=255)
gACCGCCGCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.tt < 1:537284/101‑1 (MQ=255)
aCCGCCGCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.ttt > 1:3875286/1‑100 (MQ=255)
cgccACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGcccc > 1:3730395/1‑101 (MQ=255)
cgccACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGcccc < 1:953923/101‑1 (MQ=255)
ccACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCGc > 1:110199/1‑101 (MQ=255)
cACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTTCCCCCcc > 1:428636/1‑101 (MQ=255)
cACTGCCGGGCAGCGGATCATAGGCCGGGGAATCAATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGcc < 1:3826236/101‑1 (MQ=255)
aCTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCt < 1:1611021/101‑1 (MQ=255)
ccGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCgca > 2:4185305/1‑99 (MQ=255)
cGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCCCCCCC.AAg > 1:103506/1‑101 (MQ=255)
gggCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAgg > 2:2429596/1‑101 (MQ=255)
ggCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGCTTTGGCCCCCCCCCgcggg > 1:1942452/1‑97 (MQ=255)
cAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGggcg < 2:445402/101‑1 (MQ=255)
cAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGggcg < 1:719203/101‑1 (MQ=255)
aGCGGATCATAGGCCGGGGAAGCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTTCCCCCCCCCGCAAggggg > 1:2545972/1‑99 (MQ=255)
gCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGCTTTTGCGCCCCCCCG.AAGggggg > 2:526109/1‑101 (MQ=255)
gCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGggcggc < 1:1766289/101‑1 (MQ=255)
gATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGggcggcggc < 1:1021354/101‑1 (MQ=255)
aTCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCC.AAAgggggcgggc > 2:3874365/1‑99 (MQ=255)
tCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCac < 2:2316077/101‑1 (MQ=255)
tCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCCCG.GAGggggggggcgc > 2:1791447/1‑99 (MQ=255)
cATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCCCCCCC.CAGGGGGGCCGCagc > 2:2690495/1‑99 (MQ=255)
aTAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCacga < 2:3062614/101‑1 (MQ=255)
tAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCTCG.CAGGGGGGGGGCacggc > 2:3621716/1‑99 (MQ=255)
tAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCCCG.AAGGGCGGGGGGccgac > 2:1249716/1‑101 (MQ=255)
aGGCCGGGGAATGGATCCGGTGGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCacgacg < 2:3794588/101‑1 (MQ=255)
aGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCacgacg < 1:2426395/101‑1 (MQ=255)
ggCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCC.AAGGGCGGCGGCacgccgg > 1:769592/1‑100 (MQ=255)
gCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGTCCCCCCCCC.CAGGGGGGCGGCCCGAcgcg > 1:3655714/1‑101 (MQ=255)
gCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGAcgcg < 2:1102525/101‑1 (MQ=255)
ggggAATCGATCCGGTCGAGCGGCGCGCGGGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCCCG.AAGGGCGGCGGCAAGACggggcg > 2:2919240/1‑101 (MQ=255)
ggggAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCCCCCCG.AAGGGGGGCGGGGCGGCgcggcg > 1:1324561/1‑101 (MQ=255)
gggAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGgcg.c < 2:3202719/101‑1 (MQ=255)
ggAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.Ca < 1:4225362/101‑1 (MQ=255)
gAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGGACCACGCGGCG.CAc > 2:2047692/1‑101 (MQ=255)
aTCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCGCCTCC.GAGGGCGGCGGGACGAGCCGGCG.CACCt > 2:1815619/1‑101 (MQ=255)
aTCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCGCCTCC.CAGGGGGGCGGGCCGACGCGGGG.CAccc > 1:3844451/1‑100 (MQ=255)
aTCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCt < 2:3166612/101‑1 (MQ=255)
aTCGATCCGGTCGAGCGGCGCCCGGGGCCCGCCGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCG.GAAGGCCGGGGCACGACGCGGGG.CGCCt > 2:627615/1‑101 (MQ=255)
tCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCCCG.AAAGGCGGGGGGCCGACGCGGGG.CCccct > 1:3919305/1‑99 (MQ=255)
cGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCGCCCCG.AAGGGCGGCGGCGCGGCGCGGCG.CCCCttc > 2:2804794/1‑101 (MQ=255)
cGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCttc < 2:2560150/101‑1 (MQ=255)
gATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCttcg < 1:2096147/101‑1 (MQ=255)
ccGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCttcggtt < 2:1324464/101‑1 (MQ=255)
cGGTCGAGCGGGGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCttcggttc < 2:3181374/101‑1 (MQ=255)
cGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCGCCCTCTCG.GAGGGGGGCGGCCGGGCGCGGCC.CCCCctcgggtc > 2:752644/1‑101 (MQ=255)
cGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCttcggttc < 1:2171958/101‑1 (MQ=255)
cGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCCCCTCC.AAGGGCGGCGGGGCGACGCGGCG.CAccctgcggtc > 2:593677/1‑93 (MQ=255)
ggTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTTCCCCCCCCCC.CAGGGGGGGGGGGCGCCGCGGCG.CCCCctcggttcg > 1:2872823/1‑101 (MQ=255)
tCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCggg < 1:2048305/101‑1 (MQ=255)
cGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCCCCTCC.CAGGGCGGGGGGCCCACCCGGGG.CACCCTCGGGTTgggg > 2:4216159/1‑100 (MQ=255)
cGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCGCCCCG.CAGGGGGGGGGCGCGACCCGGCG.CGCCctcgggtcgcgg > 2:3332250/1‑98 (MQ=255)
cGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCG.AAGGGGGGGGGGGCGGCGCGGCG.CCCCTTCCGGTCgggg > 2:950185/1‑100 (MQ=255)
gAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCGCCTCG.GAGGGCGGCGGGACGACGCGGCG.GCCCTTTTGTTCggggg > 2:4022038/1‑99 (MQ=255)
gAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGggcg < 2:3844198/101‑1 (MQ=255)
atcggcgCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGggcgg < 2:1380627/99‑1 (MQ=255)
aGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGggcgg < 1:1358523/101‑1 (MQ=255)
gcgcgcgcGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGcc < 2:3875032/101‑1 (MQ=255)
cgcgcgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCa < 1:3023001/101‑1 (MQ=255)
gcgcgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGGGGCGGCACGACGCGGCG.CCCCTTCGGGTCGGGGGGCGCCAt > 1:981133/1‑101 (MQ=255)
gcgcgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCAt < 1:862368/101‑1 (MQ=255)
ccgcgcgGCCCGCTGGGCGCCGTTTTCCGGGCAAAGGGGC.TTGTCCCCTCCTCG.AAGGGCGGCGCCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCAt < 2:1486845/100‑1 (MQ=255)
cgcgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCGCCCCC.AAGGGCGGCGGCACGCCGCCGCG.CCCCCTCGGGTCCggggggggccgc > 1:4179992/1‑94 (MQ=255)
cgcgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCGCCCCG.AAAGGGGGCGGCACGCCGCGGGGCCCCCCCCGGTTCGggggggccccc > 1:3121908/1‑95 (MQ=255)
gcgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCa < 1:3458827/101‑1 (MQ=255)
gcgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCa < 2:428596/101‑1 (MQ=255)
cgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAg < 1:2075923/101‑1 (MQ=255)
cgGCCGGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTCGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGct < 2:504160/101‑1 (MQ=255)
ggCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGctc < 1:1157787/101‑1 (MQ=255)
gCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCC.GAGGGCGGCGGCCCGACGCGGCG.CCCCTTCCGTTCGGGGGGCGCCCCCAGctct > 1:12932/1‑101 (MQ=255)
cGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCGCCCCG.GAGGGGGGCGGGACGGCGCGGCG.CAGCCTCGGGTCGGGCGGGGCCCGCAGCccctct > 2:1719483/1‑101 (MQ=255)
cGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCtcttct < 1:903509/101‑1 (MQ=255)
cTGGGCGCCGATTTCGCGGCAAAGGGGC.TTTGCCCCGCCTCG.AAGGGGGGCGGCACGACGCGGCG.CACCTTCGGGTCGGGCGGGGCCACCAGCTcttcttt > 1:3751005/1‑100 (MQ=255)
tGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCGCCCCG.AAGGGGGGGGGGACGACGCGGGG.CACCCTCGGTTCGGGCGGGGCCCTCCGCCcctctttc > 1:837388/1‑99 (MQ=255)
tGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCTCG.GAGGGGGGGGGGACGACGCGGGG.CACCCTCGGTTCGGGCGGGGGCAACCGCTcctctttc > 2:2120183/1‑99 (MQ=255)
tGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCG.CAGGGGGGCGGGACGACGCGGGG.CACCCTCCGGTTGGGGGGGGCCACCCGCCcttttttc > 2:785768/1‑99 (MQ=255)
tGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTcc < 2:2255013/101‑1 (MQ=255)
gggCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCt < 2:264448/101‑1 (MQ=255)
gggCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCt < 1:1479430/101‑1 (MQ=255)
gcgcCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCg < 1:144356/101‑1 (MQ=255)
gcCGATTTCCCGGCAAAGGGGC.TTTGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGGGGCGCCATCAGCCCTTCTTCCTCctg > 1:1744424/1‑101 (MQ=255)
gcCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCgtg < 2:2159280/101‑1 (MQ=255)
cGATTTCCCGGCAAAGGGGCTTTGGCCCCCCCCCG..AGGGGGGGGGGACGACGCGGCG.CACCCTCCGGTCGGGGGGGGCCCTCCGCCCTTCTTCCTCGTGtt > 2:1756320/1‑101 (MQ=255)
aTTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGGGGCACGACGCGGCG.CACCTTCGGTTCCGGGGGCGCCATCCGCTCTTCTTCCTCCTGGTcc > 2:2060317/1‑100 (MQ=255)
aTTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCg < 2:2569293/101‑1 (MQ=255)
aTTTCCCGGCAAAGGGGC.TTGGCCCCGCCCCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCCTCAGCTCTTTTTTCTCGTTTTCg > 1:1988303/1‑101 (MQ=255)
tttCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGGGCCCTCAGCTCTTCTTCCTCGTGTTCGa > 1:3235355/1‑101 (MQ=255)
ttCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGAt < 2:2463904/101‑1 (MQ=255)
cccGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCa > 2:4270106/1‑101 (MQ=255)
ccGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAg < 1:3990345/101‑1 (MQ=255)
ggCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCCGCTCTTCTTCCTCGTGTTCGATCAGcc > 2:239300/1‑101 (MQ=255)
gCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCg < 2:2872615/101‑1 (MQ=255)
aaaGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCTGGCGGGGCCATCCGCTCTTCTTCCTNGTGTTCGNtnnnnnnnn > 2:598272/1‑93 (MQ=255)
aaGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCAc > 1:2793665/1‑101 (MQ=255)
aGGGGC.TTGGCCCCGCCTCG.AAGGGGGGGGGGACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCCTCCGCCCTTCTTCCCCGGGTTCGATCAgacccccc > 2:3029155/1‑94 (MQ=255)
aGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCAcc < 2:2320419/101‑1 (MQ=255)
aGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCAcc < 1:2690685/101‑1 (MQ=255)
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CAGACCGCCGCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCG.AAGGGCGGCGGCACGACGCGGCG.CACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCACCGCGCG > NC_014034/2780310‑2780510
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|