BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	3,211,264	+G	100%	coding (116/1344 nt)	RCAP_rcc03018 ←	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	3,211,264	1	.→G	100.0%	551.0	172	coding (116/1344 nt)	RCAP_rcc03018	hypothetical protein
Reads supporting (aligned to +/- strand): new base (87/84): ref base (0/1): total (87/85)

Only 100 of 203 total aligned reads displayed.


GGCGCCCGACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.G.GTAAGGCT.GGT.G.C.GGCGCTGGCCATGA.T.CCCCTCGTGGTCCGGGGCAGGAT.A.GGGCGGC.CAGGGGGGGCCCAAGGCCCGGTAACGTCGCAG  >  NC_014034/3211164‑3211356


ggCGCCCGACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.t                                                                                                         <  1:3612543/101‑1 (MQ=255)


ggCGCCCGACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.t                                                                                                         <  1:767462/101‑1 (MQ=255)


  tctccGACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.g.g                                                                                                     <  1:277009/98‑1 (MQ=255)


   gcCCGACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.g.gg                                                                                                    >  2:629170/1‑100 (MQ=255)


   gcCCGACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.g.gg                                                                                                    >  1:687465/1‑100 (MQ=255)


     ccGACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.g.ggta                                                                                                  >  2:4201091/1‑98 (MQ=255)


     ccGACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.g.ggta                                                                                                  <  1:889244/101‑4 (MQ=255)


     ccGACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.g.gaga                                                                                                  >  2:276974/1‑98 (MQ=255)


      cGACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.g.ggtaa                                                                                                 <  1:3275155/101‑5 (MQ=255)


       gACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.g.ggtaag                                                                                                <  2:3958616/101‑6 (MQ=255)


       gACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.g.ggtaag                                                                                                <  1:2296843/101‑6 (MQ=255)


       gACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.g.ggtaag                                                                                                >  2:2460982/1‑96 (MQ=255)


        aCATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAgg                                                                                                <  2:3078967/101‑1 (MQ=255)


          aTCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCt                                                                                              >  1:1972734/1‑101 (MQ=255)


           tCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.g                                                                                            <  2:2512845/101‑1 (MQ=255)


              cggcgcggTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.g                                                                                        <  2:530784/101‑1 (MQ=255)


              cggcgcggTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.g                                                                                        <  1:581794/101‑1 (MQ=255)


               ggcgcggTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.g.c                                                                                      <  1:3164143/101‑1 (MQ=255)


               ggcgcggTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.g.c                                                                                      <  1:1695636/101‑1 (MQ=255)


               ggcgcggTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.g.c                                                                                      >  2:38742/1‑101 (MQ=255)


                    ggTCGTGCTTGCCGGGGCAAAAGGAGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGG.g.c.gggtg                                                                                >  1:1076133/1‑98 (MQ=255)


                      tCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.g.c.gggcgct                                                                              <  2:2067166/101‑6 (MQ=255)


                       cGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTg                                                                              <  1:2972437/101‑1 (MQ=255)


                        gTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAATCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGG.g.c.gggtggtgg                                                                            >  2:2135747/1‑94 (MQ=255)


                        gTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTgg                                                                             >  2:1882452/1‑101 (MQ=255)


                        gTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTgg                                                                             <  1:386221/101‑1 (MQ=255)


                        gTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTgg                                                                             >  1:1155854/1‑101 (MQ=255)


                         tGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCTGGGG.G.G.GGCGCTGGc                                                                            >  1:3114157/1‑101 (MQ=255)


                         tGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.GTG.GGCGCTGGc                                                                            >  2:1037288/1‑101 (MQ=255)


                          gCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGG.g.c.gggggctgggc                                                                          >  1:1000515/1‑92 (MQ=255)


                           cTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCa                                                                          >  2:2264497/1‑101 (MQ=255)


                           cTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCa                                                                          >  2:2234067/1‑101 (MQ=255)


                           cTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCa                                                                          <  2:1972605/101‑1 (MQ=255)


                            ttGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCAt                                                                         <  1:2165083/101‑1 (MQ=255)


                            ttGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCAt                                                                         >  1:806659/1‑101 (MQ=255)


                             tGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATg                                                                        >  1:157593/1‑101 (MQ=255)


                              gCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGa                                                                       >  2:2154502/1‑101 (MQ=255)


                               ccGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.t                                                                     <  1:3306179/101‑1 (MQ=255)


                                cGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGTGG.G.GGCGCTGGCGATGA.T.c                                                                   >  2:3499000/1‑101 (MQ=255)


                                 ggggCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.T.cc                                                                  >  2:2304870/1‑101 (MQ=255)


                                   ggCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.T.cccc                                                                >  2:4139710/1‑101 (MQ=255)


                                    gCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.T.ccccc                                                               <  1:2584795/101‑2 (MQ=255)


                                      aaaaGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.T.ccccctc                                                             <  2:2610750/101‑4 (MQ=255)


                                      aaaaGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.T.ccccctc                                                             <  1:1707150/101‑4 (MQ=255)


                                      aaaaGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.T.ccccctc                                                             <  1:2450158/101‑4 (MQ=255)


                                      aaaaGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.T.ccccccc                                                             >  1:1273460/1‑98 (MQ=255)


                                       aaaGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.T.ccccctcg                                                            >  2:3143629/1‑97 (MQ=255)


                                       aaaGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.T.ccccctcg                                                            <  1:1830418/101‑5 (MQ=255)


                                          ggTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTgg                                                          <  2:1153328/101‑1 (MQ=255)


                                           gTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGt                                                         >  1:2568957/1‑101 (MQ=255)


                                             gATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTcc                                                       <  1:2848018/101‑1 (MQ=255)


                                             gATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTcc                                                       <  1:4088403/101‑1 (MQ=255)


                                              aTGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCg                                                      <  1:3408764/101‑1 (MQ=255)


                                                 ccGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCgggg                                                   <  1:2138823/101‑1 (MQ=255)


                                                  cGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGc                                                  >  2:3625281/1‑101 (MQ=255)


                                                   gATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCa                                                 >  1:2333004/1‑101 (MQ=255)


                                                    aTGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCCTGA.TCCCCCTCGTGGTCCGGGGCAg                                                >  2:166552/1‑101 (MQ=255)


                                                    aTGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAg                                                >  2:3666457/1‑101 (MQ=255)


                                                    aTGCGACCCAGGCCGCGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAg                                                <  1:4203405/101‑1 (MQ=255)


                                                     tGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAgg                                               >  1:462267/1‑101 (MQ=255)


                                                      gCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGa                                              <  1:2243016/101‑1 (MQ=38)


                                                        gACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.a                                           >  2:3525986/1‑101 (MQ=38)


                                                             cggCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GGAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.A.ggggc                                     <  2:832661/100‑3 (MQ=25)


                                                             aGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.A.ggggc                                     <  2:875077/101‑3 (MQ=37)


                                                             aGGCCGGGCCCGGCCGGAACCTCGGCCATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.A.ggggc                                     <  1:2692419/101‑3 (MQ=25)


                                                              ggCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.A.ggggcg                                    >  2:1827367/1‑98 (MQ=37)


                                                                 cGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGGCCGGGGCAGGAT.A.ggggcgggg                                 >  2:1284951/1‑95 (MQ=25)


                                                                  gggCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.A.ggggcggcgc                                >  2:2765550/1‑94 (MQ=25)


                                                                  gggCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.A.ggggcggcgc                                >  2:3016049/1‑94 (MQ=25)


                                                                  gggCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGG.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.A.ggggcggcgc                                >  1:4373866/1‑94 (MQ=21)


                                                                    gCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.A.ggggcggcgcag                              >  1:4441598/1‑92 (MQ=21)


                                                                    gCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.A.ggggcggcgcag                              >  2:4287734/1‑92 (MQ=21)


                                                                    gCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.A.ggggcggcgcag                              <  2:3301808/101‑10 (MQ=21)


                                                                     cccGGCCGGAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.A.ggggcggcgcagg                             <  2:3250645/101‑11 (MQ=21)


                                                                        ggccggAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAggggg                           >  2:3880897/1‑101 (MQ=18)


                                                                        ggccggAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAggggg                           >  2:3083439/1‑101 (MQ=18)


                                                                            ggAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGcc                       <  1:4129961/101‑1 (MQ=18)


                                                                            ggAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGcc                       <  2:1000430/101‑1 (MQ=18)


                                                                            ggAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGcc                       >  2:3443780/1‑101 (MQ=18)


                                                                             gAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGccc                      >  1:1994641/1‑101 (MQ=18)


                                                                             gAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGccc                      <  1:3465726/101‑1 (MQ=18)


                                                                             gAACCTCGGCGATCTGCAGCGGA.TGG.GTAAGGAT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGccc                      <  1:3779712/101‑1 (MQ=17)


                                                                                ccTCGGCGATCTGCAGCGGAGG.G.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAg                   <  1:3742814/101‑1 (MQ=17)


                                                                                   cGGCGACATGAAGCGGA.T.GCGTAAGGGT.AGT.A.CGGGCGGTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGAGAGGCACAAGGcc                <  2:1891563/101‑1 (MQ=2)


                                                                                    ggCGATCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGccc               >  1:2478621/1‑101 (MQ=17)


                                                                                        aTCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCCCggaa           <  2:775773/101‑3 (MQ=14)


                                                                                        aTCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGAGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCCCggaa           <  1:2370142/101‑3 (MQ=14)


                                                                                         tCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCCCggaac          <  2:687385/101‑4 (MQ=14)


                                                                                         tCTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCCCggaac          <  2:4179609/101‑4 (MQ=14)


                                                                                         tCTGCAGCGGA.TGG.GTAAGGCG.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCCCggaac          <  2:1610715/101‑4 (MQ=11)


                                                                                          cTGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCCCggaacg         >  2:3337739/1‑97 (MQ=14)


                                                                                           tGCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGGCCAAGGCCCggaacgg        >  1:3504591/1‑96 (MQ=2)


                                                                                            gCAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCCCGG.AACGTc      >  2:4083010/1‑101 (MQ=11)


                                                                                             cAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGGCCAAGGCCCGG.AACGTCg     >  1:2029700/1‑101 (MQ=2)


                                                                                             cAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCCCGG.AACGTCg     >  2:440144/1‑101 (MQ=11)


                                                                                             cAGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCCCGG.AACGTCg     >  1:4284412/1‑101 (MQ=11)


                                                                                              aGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGATT.CCCCTCGTGGTCCGGGGCTGGATAA.GGGCGGCGGAGGGGGGGCCNCAGGCCCGG.AACGTCga    >  2:1090875/1‑100 (MQ=9)


                                                                                              aGCGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCGCGG.AACGTCGc    >  2:2214902/1‑101 (MQ=2)


                                                                                                cGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGCCATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCCCGG.AACGTCGCAg  >  2:3761539/1‑101 (MQ=11)


                                                                                                cGGA.TGG.GTAAGGCT.GGT.G.CGGGCGCTGGACATGA.TCCCCCTCGTGGTCCGGGGCAGGAT.AGGGGCGGCGCAGGGGGGGCCCAAGGCCCGG.AACGTCggcg  >  1:2086375/1‑98 (MQ=2)


GGCGCCCGACATCGCGGCGCGGTCGTGCTTGCCGGGGCAAAAGGTGATGCCGATGCGACCCAGGCCGGGCCCGGCCGGAACCTCGGCGATCTGCAGCGGA.T.G.GTAAGGCT.GGT.G.C.GGCGCTGGCCATGA.T.CCCCTCGTGGTCCGGGGCAGGAT.A.GGGCGGC.CAGGGGGGGCCCAAGGCCCGGTAACGTCGCAG  >  NC_014034/3211164‑3211356

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG