| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 905,035 | +C | 90.9% | intergenic (+139/‑57) | RCAP_rcc00821 → / → murB | hypothetical protein/UDP‑N‑acetylmuramate dehydrogenase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 905,035 | 1 | .→C | 90.9% | 37.5 ‑2.4 ‑1.2 | 153 | intergenic (+139/‑57) | RCAP_rcc00821/murB | hypothetical protein/UDP‑N‑acetylmuramate dehydrogenase |
| Reads supporting (aligned to +/- strand): new base (78/61): ref base (4/10): total (82/71) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.87e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.70e-02 | ||||||||||
Only 100 of 184 total aligned reads displayed.
GCCAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CG.CCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACACCCCGCGCGGCGCGCTGAC > NC_014034/904935‑905129
|
gCCAAAATTCACGCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAg.cg > 1:2415032/1‑101 (MQ=255)
gCCAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAg.cg > 1:1109769/1‑101 (MQ=255)
gCCAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAg.cg > 2:1224017/1‑101 (MQ=255)
aaaTTCACCCCCCGCCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CG.cccc < 2:168558/101‑1 (MQ=255)
aaTTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGGAG.CG.ccccc > 2:3718714/1‑101 (MQ=255)
aTTCCCCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CG.cccccc < 1:2622039/101‑1 (MQ=255)
aTTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGTAG.CG.cccccc > 2:170407/1‑101 (MQ=255)
aTTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CG.cccccc > 1:4314246/1‑101 (MQ=255)
tCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CG.cccccccc < 1:2213106/101‑1 (MQ=255)
aCCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGGCG.CG.cccccccccc > 2:884695/1‑99 (MQ=255)
aCCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CG.ccccccccct > 1:4216669/1‑99 (MQ=255)
ccccccGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CG.CCCCCCCcctt > 1:4242531/1‑101 (MQ=255)
cccccGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CG.CCCCCCCccttt > 2:1668733/1‑100 (MQ=255)
cccccGGCGTATTGGCACCAGGAAAAAGCCCGGGGTTTTTCCTGGTC.GAAATCCG.CGGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CG.CCCCCCCccttt < 2:1003884/101‑2 (MQ=37)
ccGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCctttctt < 2:2222329/101‑1 (MQ=255)
cGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATCCG.CGGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCctttcttt < 2:3490689/101‑1 (MQ=37)
cGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCctttcttt > 2:109118/1‑101 (MQ=255)
gtttATTGGCACCGAGAAAAAGCCCGGCGTTTTTCCTGGGC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCg < 1:319119/98‑1 (MQ=25)
gCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCg > 2:586241/1‑101 (MQ=255)
cGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGa > 2:3599213/1‑101 (MQ=255)
cGTATTTCCACCAGGAAAAAGCCCGGCTTTGTTCCTGGTC.GAAATGCG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGa < 1:303109/101‑1 (MQ=25)
gtttttGCCCCAGGAAAAAGGCCGGCCTTTTTCCCGGCC.CCAATACGCCCGGGCGGGACCCCGTCGTGC.GTGGGGGTCCCG.CC.CCCCCCCCTTTCTTTCGa < 2:211508/98‑1 (MQ=255)
gTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGAc > 1:3419095/1‑101 (MQ=255)
gTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGAc > 1:1815174/1‑101 (MQ=255)
aTTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGAccc > 1:78303/1‑101 (MQ=255)
aTTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGAC.GAAATACG.CTGTG.GGGAGTCCT.CTTGCGGACGGGGGGCAG.CGCCCCCCCCctttctttggcctc > 2:1450790/1‑95 (MQ=25)
tttGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGAcccc > 2:415669/1‑101 (MQ=255)
ttGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCt > 2:2347218/1‑101 (MQ=255)
ttGCACCAGGAAAAAACCCGGCGTTTTTCCTGGTC.GAAATCCG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCt < 2:1835019/101‑1 (MQ=37)
tGCGCCGGGGAAAGGCCGGGCGTTTGT.CTGGCCTGAAAAAGG.CAGGG.GGGGGCCCG.CTTGCGGGGGGGGGCCCG.CGCCCCCCCCCTTTCTTTCGACCCCtt < 1:3631964/101‑1 (MQ=255)
cACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGc > 1:3818167/1‑101 (MQ=255)
cACCA.GAAAAAACCCGGTTTTTTTCCGGGGCAAAAATGCG.CGGGG.GGGAGTCCG.TTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGc < 1:884780/101‑1 (MQ=12)
cccAGGAAAAAGCCCTGTCTTTTTCCCTGTCAAAAATCCG.GGGGG.GGGAGTCCG.CTTGCGGAGGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGc < 2:3732039/100‑1 (MQ=12)
aCCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGcc > 1:906981/1‑101 (MQ=255)
ccAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGccc > 2:726872/1‑101 (MQ=255)
cAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGcccc > 2:3359047/1‑101 (MQ=255)
aGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGccccc > 2:1922676/1‑100 (MQ=255)
ggAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCAt < 2:4179214/101‑1 (MQ=255)
ggAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CG.CCCCCCCCTTTCTTTCGACCCCTTGCCCCAtt < 2:2935950/101‑1 (MQ=255)
ggAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGACCG.CGCCCCCCCCCTTTCTTTCGACCCCCTGCCCCAt > 2:1789837/1‑101 (MQ=37)
aaaGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTggg > 2:2736678/1‑101 (MQ=255)
aaaGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAATCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGGCCCCTTGTCCCATTcgg > 1:2717358/1‑101 (MQ=25)
gCCCGGCGTTTTTCCTGGTC.GAAAGACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTg < 2:3152485/101‑1 (MQ=255)
cccGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGc < 1:3515428/101‑1 (MQ=255)
cGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGctc < 2:3418247/101‑1 (MQ=255)
ggCGTTTTTCCTGGTC.GAAATACG.CCTGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGGGctct > 1:1324264/1‑101 (MQ=37)
gCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCtctc < 1:605094/101‑1 (MQ=255)
gCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCtctc < 2:3639695/101‑1 (MQ=255)
cGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCg > 1:2357289/1‑101 (MQ=255)
gTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTCCGACCCCTTGCCCCATTGGGGTGCTCTCGt < 1:3974159/101‑1 (MQ=255)
tttttCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGtt > 1:707404/1‑101 (MQ=255)
tttttCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGtt > 1:1882792/1‑101 (MQ=255)
tttttCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGGGCTCTCGtt > 2:3428275/1‑101 (MQ=255)
ttttcCCTGGCC.AAAAGAGG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGtt < 2:47026/101‑1 (MQ=25)
ttttCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTa < 2:2598252/101‑1 (MQ=255)
ttttCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTa > 1:4139655/1‑101 (MQ=255)
tttCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTAt > 1:473388/1‑101 (MQ=255)
ttCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATg > 2:3374414/1‑101 (MQ=255)
ttCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGGGCTCTCGTTATg > 1:4070886/1‑101 (MQ=255)
tCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATgg > 1:2952247/1‑101 (MQ=255)
ggTC.GAAATCCG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAGCCC.CCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAgg < 1:2208599/101‑1 (MQ=37)
tC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGc > 2:854405/1‑101 (MQ=255)
c.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGGGCTCTCGTTATGGCAgggga > 2:4319258/1‑99 (MQ=255)
gAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGGAt > 2:3299445/1‑101 (MQ=255)
gAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCAt > 1:1424121/1‑101 (MQ=255)
gAAATACG.CCGGG.GGGAGCCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCAt < 2:3536473/101‑1 (MQ=255)
aaaacgcggggg.gggAGTCCG.CTGGCGGACGGGGGGCAGCCC.CCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATg < 2:249919/92‑1 (MQ=255)
tACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGAc < 1:1352453/101‑1 (MQ=255)
aCG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGGATgggga > 1:560761/1‑98 (MQ=37)
cG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACaa < 2:588163/101‑1 (MQ=255)
g.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAg < 2:3594849/101‑1 (MQ=255)
ccGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGGTCTCGTTATGGCAGGGCATGGGCagac > 1:465677/1‑98 (MQ=25)
ggg.gggGGTCCG.TTGCCGGCCGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTg < 2:1577959/101‑1 (MQ=255)
ggg.gggAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGGATGGGCAAGCTg > 2:39918/1‑101 (MQ=37)
gg.gggAGTCCG.CTTGGGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGa < 2:274504/101‑1 (MQ=255)
g.gggAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGGGTGGGCAAGCTGAg > 1:2298146/1‑101 (MQ=37)
g.gggAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGGATGGGCAAGCTggg > 2:1686164/1‑99 (MQ=37)
g.gggAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACCAACTggg > 2:2844998/1‑99 (MQ=37)
g.gggAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAg < 1:1224110/101‑1 (MQ=255)
gggAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGc < 1:157246/101‑1 (MQ=255)
gAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGGCAAGCTGAGCtc > 2:4288306/1‑100 (MQ=255)
gAGTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTa < 1:1789956/101‑1 (MQ=255)
ggTCCG.CTTGCGGACGGGGGGCAC.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTac < 1:2132956/100‑1 (MQ=255)
aGTCCG.CTTGCGGACGGGGGGCAG.CG.CCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGGATGGGAAAGGTGAGCCaca > 1:1528749/1‑101 (MQ=37)
gTCCG.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGGGTGGAACAGCTGGGGTacc > 2:655458/1‑100 (MQ=25)
g.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACCcccc > 2:206100/1‑101 (MQ=255)
g.CTTGCGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACAcccc < 1:2805550/101‑1 (MQ=255)
cGGACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGGTACAcccccccgg > 2:3265332/1‑96 (MQ=255)
ggACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACACCCCgcgcgg > 1:1628903/1‑101 (MQ=255)
ggACGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCAGAGCTACACCCCccgcgg > 1:1232831/1‑101 (MQ=255)
aCGGGGGGCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGGATGGACAAGCTGAGCTACACCCCccgcggcg > 1:634746/1‑101 (MQ=255)
aCGGGGGGAAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACACCCCgcgcggcg < 1:2587110/101‑1 (MQ=255)
ggggggCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATCGGCAAGCTGAGCTACACCCCgcgcggggcc > 2:1342146/1‑100 (MQ=255)
gggggCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATTGCACGGCATGGACAAGGTGAGCTACACCCCGCGCGgcgcgc > 2:4422096/1‑101 (MQ=255)
gggggCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACACCCCGCGCGgcgcgc > 1:3767985/1‑101 (MQ=255)
ggggCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACACCCCGCGCGGCGCGCt < 1:3718967/101‑1 (MQ=255)
gggCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACACCCCGCGCGGCGCGCTg < 1:3544194/101‑1 (MQ=255)
ggCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACACCCCGCGCGGCGCGCTGa < 1:3359284/101‑1 (MQ=255)
ggCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACACCCCGCGCGGCGCGCTGa < 2:796522/101‑1 (MQ=255)
gCAG.CGCCCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACACCCCGCGCGGCGCGCTGAc < 2:1195220/101‑1 (MQ=255)
|
GCCAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTC.GAAATACG.CCGGG.GGGAGTCCG.CTTGCGGACGGGGGGCAG.CG.CCCCCCCCTTTCTTTCGACCCCTTGCCCCATTGGGGTGCTCTCGTTATGGCAGGGCATGGACAAGCTGAGCTACACCCCGCGCGGCGCGCTGAC > NC_014034/904935‑905129
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|