New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 347726 =256 (1.230)2 (0.010) 2/184 34.7 0.01 coding (58/558 nt) rplE 50S ribosomal protein L5
?NC_014034 = 635658 177 (0.780)coding (56/2745 nt) RCAP_rcc00596 hypothetical protein
Rejected: Position hash score below cutoff.

CTTGGTGTCCTTGACGGCTTCGCCGACGCCCATGTTCAGAACGATCTTTTCGATCCGGGGGATCTGCATGTCGTTATTGTAGCCGAACTGCTCTTTCATCGCAGCGCG....................................................................................................  <  NC_014034/347833‑347726
....................................................................................................GCAGCGCGACAAGGCCAAGAAGCAACCACGGCGCGGTAAAGCCAAGCGGGCCCAGCATCGTCATCGCCAGCCCCCCGCCAGCGCGCCATGCAGCCACAAAAGCGCCGC  <  NC_014034/635658‑635559
                                                                                                                                                                                                                
                                    CAGAACGATCTTTTCGATCCGGGGGATCTGCATGTCGTTATTGTAGCCGAACTGCTCTTTCATCGCAGCGCGACAAGGCCAAGAAGCAACAACGGCGCGGT                                                                         >  2:3048524/1‑101 (MQ=255)
                                                           GGATCTGCATGTCGTTATTGTAGCCGAACTGCTCTTTCATCGCAGCGCGACAAGGCCAAGAAGCAACCACGGCGCGGTAAAGCCAAGCGGGCCCAGCATCG                                                  <  1:3048745/101‑1 (MQ=255)
                                                                                                                                                                                                                
CTTGGTGTCCTTGACGGCTTCGCCGACGCCCATGTTCAGAACGATCTTTTCGATCCGGGGGATCTGCATGTCGTTATTGTAGCCGAACTGCTCTTTCATCGCAGCGCG....................................................................................................  <  NC_014034/347833‑347726
....................................................................................................GCAGCGCGACAAGGCCAAGAAGCAACCACGGCGCGGTAAAGCCAAGCGGGCCCAGCATCGTCATCGCCAGCCCCCCGCCAGCGCGCCATGCAGCCACAAAAGCGCCGC  <  NC_014034/635658‑635559

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 17 ≤  ATCG  < 26 ≤  ATCG  < 36 ≤  ATCG