| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,552 | C→G | 32.1% | intergenic (+364/‑567) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,552 | 0 | C→G | 32.1% | 286.5 ‑2.2 ‑0.8 | 317 | intergenic (+364/‑567) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (44/56): ref base (115/98): total (161/156) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.15e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.74e-01 | ||||||||||
Only 100 of 340 total aligned reads displayed.
GCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGC > NC_014034/1395452‑1395652
|
gCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.c > 2:3692906/1‑101 (MQ=255)
cGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.cc < 1:3579236/101‑1 (MQ=255)
gTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCa < 2:4178411/101‑1 (MQ=255)
tGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAg > 1:145093/1‑101 (MQ=255)
ggATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGGTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGc < 1:584867/101‑1 (MQ=255)
aTCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGAGTGGATCGAAACATCTCGGTGCCGTGGCTCG.T.CCAGCCg > 2:2519687/1‑101 (MQ=255)
cGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.c > 2:3581973/1‑101 (MQ=255)
aaaCATCGCCGCTTTGGCGGTGGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCt > 1:2546586/1‑101 (MQ=255)
aaaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCt > 2:1981166/1‑101 (MQ=255)
aTCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCtc < 1:2519588/101‑1 (MQ=255)
tCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCtcg > 1:160646/1‑101 (MQ=255)
gccgcTTTGGCGGTCGACAGGCTGGTAACGTGACGCTCCCCCCGCGGGGGAGTGGATCGAAACATCTCGGTGCCGCCGCTCG.T.CCAGCCGG.CCGCCtcgtc > 1:2790155/1‑101 (MQ=38)
ccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCtcgtcg < 2:4337967/101‑1 (MQ=255)
ccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCtcgtcg < 2:2726385/101‑1 (MQ=255)
cgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCACGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGc > 2:2981382/1‑101 (MQ=255)
cTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTc > 1:84126/1‑101 (MQ=255)
cTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTc > 2:2578642/1‑101 (MQ=255)
gCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCGCGTCGCTcccccc > 2:1415436/1‑101 (MQ=255)
cGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTccccccc > 1:308252/1‑100 (MQ=255)
ggTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCcgc > 2:2642920/1‑101 (MQ=255)
ggTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCcgc > 1:3022552/1‑101 (MQ=255)
gACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCgggg > 2:1000043/1‑101 (MQ=255)
aCAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCggggg < 1:715024/101‑1 (MQ=255)
cAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGc < 1:1921584/101‑1 (MQ=255)
cAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGc < 2:1855227/101‑1 (MQ=255)
cAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCCGCCCGTCGCTCCCCCCCCGGGGGc > 1:282830/1‑101 (MQ=38)
nnnnnnnaCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGtn < 1:1870365/94‑2 (MQ=255)
gCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCATCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTg > 2:1051501/1‑101 (MQ=255)
gCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTCGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCGGGCGG.CCTGCTCGGCGCTCCCCCCGCTGGGGCGTg > 2:1762548/1‑101 (MQ=38)
agcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACG.TGGCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTgg < 2:2096070/91‑1 (MQ=2)
aaggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTgg > 1:1571544/11‑101 (MQ=2)
gcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCG.GCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGa < 1:3181707/92‑1 (MQ=0)
aggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGa < 1:2635088/92‑1 (MQ=0)
ggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:1704250/93‑1 (MQ=2)
ggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCG.GCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGGGGATc > 1:3221567/8‑101 (MQ=0)
ctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.G.GCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:4065638/8‑101 (MQ=2)
tcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.G.GCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:2408261/7‑101 (MQ=2)
gctgcgggcGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCG.GCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:3283593/93‑1 (MQ=2)
ccgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.G.GCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:828281/95‑1 (MQ=2)
cggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:916137/96‑1 (MQ=2)
aaCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGGGGATCGa > 1:428770/1‑101 (MQ=255)
ggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:3928751/5‑101 (MQ=2)
ggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:2108022/5‑101 (MQ=2)
gtggtCGCCCCCCCCGCGGGGGCGCGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:3480137/98‑1 (MQ=2)
ccggtCGCGCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.G.GCGGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:3042668/98‑1 (MQ=2)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:4106974/1‑101 (MQ=255)
ctgccccTCCCCCCGCGGGGGCGTGGATCCAAACACCTCGGTGCCGCCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:4212068/95‑1 (MQ=37)
tgtCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacc < 1:1130060/101‑1 (MQ=255)
ggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCG.GCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacc < 2:2144519/100‑1 (MQ=2)
ggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAact < 1:1300839/100‑2 (MQ=2)
cgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.G.GCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaaat > 2:70497/2‑99 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.G.GCTGACGGACCCGCCCGTCGCTCCCCCCCCGGGGGCGTGGATCGCAactg > 2:1610703/1‑99 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacta < 2:3646860/101‑3 (MQ=2)
gcGCCCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.G.GCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgc < 2:1132644/100‑4 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccacc > 1:4141306/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatg < 2:3549457/101‑5 (MQ=2)
gccccccccGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCG.GCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgc < 1:3151513/98‑5 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.G.GCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgt > 1:4033531/1‑96 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.G.GCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgt < 1:2585977/101‑6 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.G.GCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgt > 1:2376134/1‑96 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCG.GCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgc > 1:2968658/1‑97 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCG.GCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgc < 2:1502136/101‑5 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCtt > 2:2359555/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgct < 1:1370187/101‑7 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTg < 2:1206696/101‑1 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTg > 1:245244/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctg < 2:1273044/101‑8 (MQ=2)
cccccccGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTg < 1:3422241/100‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGc > 1:4202298/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCACCGCGGGGGCGTGGATCGAAACCACCTTGc < 1:1030052/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCG.GCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggc > 1:3664895/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCG.GCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggc > 1:3492231/1‑94 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.G.GCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgcgc > 2:3099463/1‑92 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctggc > 2:2200738/1‑92 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCTCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCgg > 2:482597/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.T.GCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGGGGATCGAAactatactggct > 1:1853914/1‑91 (MQ=2)
cccGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGa > 1:2745835/1‑101 (MQ=255)
ggggCGTGGATCGAACCATCTTGGCGCCGTTGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCGTGCGGATTGTCa < 2:2432641/101‑1 (MQ=37)
ggggCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCa > 2:3388108/1‑101 (MQ=255)
gggCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCAc > 1:4078246/1‑101 (MQ=255)
ggCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACt > 1:1667766/1‑101 (MQ=255)
gTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTc > 2:2672026/1‑101 (MQ=255)
tGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTcg < 2:385895/101‑1 (MQ=255)
tGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTcg < 1:1068494/101‑1 (MQ=255)
tCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACCACCTTGCGGATTGTCACTTTCGCggg > 1:490881/1‑101 (MQ=255)
tCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCCCTTTCGCggg > 1:1531161/1‑101 (MQ=255)
gAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGc > 2:203211/1‑101 (MQ=255)
aaaCATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCg < 2:514822/101‑1 (MQ=255)
aaaCATCCCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCg < 2:2882355/101‑1 (MQ=255)
aaCATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGa < 2:3835187/101‑1 (MQ=255)
aCATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGG.TCGAAAACCCCCTTCGGGTTGGCCCTTTTGCCGGGCGAAg > 2:1674191/1‑101 (MQ=25)
cctctcGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAg < 2:3182117/99‑1 (MQ=255)
cATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAAGCACCTTGCGGATTGTCACTTTCGCGGGGCGAAg > 1:3789093/1‑101 (MQ=255)
aTCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGc > 2:1325554/1‑101 (MQ=255)
aTCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGc < 1:2219277/101‑1 (MQ=255)
tctcGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCg > 1:2702784/1‑101 (MQ=255)
ggTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGc < 1:4443810/101‑1 (MQ=255)
gCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCCcc > 1:4317755/1‑101 (MQ=255)
ccGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTccc < 1:1981295/101‑1 (MQ=255)
g.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCgggg > 2:3989161/1‑101 (MQ=255)
|
GCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.T.CCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGC > NC_014034/1395452‑1395652
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|