| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,317 | G→A | 5.9% | intergenic (‑113/‑192) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,317 | 0 | G→A | 5.9% | 19.3 ‑2.2 ‑0.3 | 169 | intergenic (‑113/‑192) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (2/8): ref base (76/82): total (78/91) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.08e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.26e-01 | ||||||||||
Only 100 of 180 total aligned reads displayed.
ATTGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.G.CCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.CCCCCTTCGCGGGCGGCCGCGACGC > NC_014034/2249218‑2249416
|
aTTGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAg > 1:1451835/1‑101 (MQ=255)
aTTGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAg < 1:473005/101‑1 (MQ=255)
ttGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAgg > 2:1806592/1‑101 (MQ=255)
ttGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAgg > 2:3488609/1‑101 (MQ=255)
ttGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.G.CCCCAGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAgg > 2:1216471/1‑101 (MQ=255)
tGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGc < 2:4398909/101‑1 (MQ=255)
gtgtTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCaa > 1:4231972/1‑101 (MQ=255)
tgtTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACC.CCCCCGGGATATTTGAGGCAAg > 1:1343939/1‑101 (MQ=255)
tgtTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGCGACT.CCCCCGGGATATTTGAGGCAAg > 2:732493/1‑101 (MQ=255)
gtTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGa < 2:2353235/101‑1 (MQ=255)
tCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATg > 1:3338921/1‑101 (MQ=255)
tCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATg < 1:4240242/101‑1 (MQ=255)
cTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGa < 1:3945259/101‑1 (MQ=255)
ttGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGaa < 2:272470/101‑1 (MQ=255)
ttGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGaa < 1:2292102/101‑1 (MQ=255)
agaTGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...ggg > 2:4263275/1‑101 (MQ=255)
agaTGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...ggg > 2:83736/1‑101 (MQ=255)
aTGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...ggggg < 2:1664855/101‑1 (MQ=255)
tGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...gggggg < 1:3768299/101‑1 (MQ=255)
gCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGc < 1:431239/101‑1 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCt < 2:2499306/101‑1 (MQ=255)
caGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCttt < 1:896766/101‑1 (MQ=255)
caGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCttt < 2:3655832/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTc < 1:1594615/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTc < 1:4216614/101‑1 (MQ=255)
gATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCa > 2:2338390/1‑101 (MQ=255)
gATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCa > 1:174611/1‑101 (MQ=255)
aTACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCACGATGAA...GGGGGGCTTTCAt > 1:2654751/1‑101 (MQ=255)
aTACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCAt > 2:1026100/1‑101 (MQ=255)
tACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATc > 2:1570295/1‑101 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCt > 1:907763/1‑101 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCt > 1:588565/1‑101 (MQ=255)
cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTg < 2:1451728/101‑1 (MQ=255)
cAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGcc > 2:1457976/1‑101 (MQ=255)
aGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCg < 2:4228665/101‑1 (MQ=255)
aGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCg > 1:239901/1‑101 (MQ=255)
aGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCg < 2:905584/101‑1 (MQ=255)
gCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGa < 2:2066088/101‑1 (MQ=255)
cTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGaa < 1:2927752/101‑1 (MQ=255)
cTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGaa < 1:758475/101‑1 (MQ=255)
ttGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGaaa > 2:1538005/1‑101 (MQ=255)
ttGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGaaa < 2:4225319/101‑1 (MQ=255)
tGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGaaaa < 2:1298623/101‑1 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAat > 1:1337162/1‑101 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAat < 2:4468/101‑1 (MQ=255)
ggCACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAata < 1:3156191/101‑1 (MQ=255)
cACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATc < 2:2180251/101‑1 (MQ=255)
cACCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATc < 2:3982962/101‑1 (MQ=255)
aCCCGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATcc < 1:2418784/101‑1 (MQ=255)
cGGGGCAAGAAGGGGGCTCT.GCCCCC.GTGCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCgg < 2:4371622/101‑1 (MQ=255)
cGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCgg > 1:1909028/1‑101 (MQ=255)
cGGGGCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCgg < 1:3170951/101‑1 (MQ=255)
ggCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCggggg > 2:4366761/1‑101 (MQ=255)
gCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCgggggg > 2:1158809/1‑101 (MQ=255)
gCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCgggggg < 2:3245345/101‑1 (MQ=255)
gCAAGAAGGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCgggggg < 1:2587984/101‑1 (MQ=255)
agaggGGGCCTCT.CCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGa < 1:2338540/101‑1 (MQ=37)
aagGGGGCTCTCC.CCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAAt < 2:951015/101‑1 (MQ=255)
aagGGGGCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAAt > 1:3570651/1‑101 (MQ=255)
gggggCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATgg < 1:513595/101‑1 (MQ=255)
ggggCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGgc < 1:69665/101‑1 (MQ=255)
gCTCT.GCCCCC.GTCCGGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGTCTTTTCATGTTGCCGAAACTATCCCGGTCGCTGAATGgcggc > 2:295579/1‑99 (MQ=21)
gCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCa < 2:3436257/101‑1 (MQ=255)
gCTCT.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCa < 1:1006474/101‑1 (MQ=255)
ctct.GCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAg > 2:247635/1‑101 (MQ=255)
tctgccccc.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATTAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGc > 1:2175671/6‑101 (MQ=255)
ctaccccc.GTCCCGTGCCGGGGCT.CCCCCGGGATATTTGATGCAAGATGAA...GGGGGGGTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGcc < 1:51823/97‑1 (MQ=37)
ccc.ggcccgtGCCGGGACT.CCCCGGGGATATTTGAGGCAAGATGAA...GGGGGGGTTTCATCTTGCCGAAAATATCGCGGGGGGTGAATGGCGCAGCCAGAgg < 1:2938630/101‑1 (MQ=38)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAgggggg > 2:2576331/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGc > 1:2453951/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCa < 1:3924492/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAg < 2:1010498/101‑1 (MQ=255)
cgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAggggg < 2:272454/94‑1 (MQ=18)
cgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAggggg > 2:1957836/8‑101 (MQ=21)
gcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGGGAATGGCGAAGCCAGAgggggg > 2:744283/7‑101 (MQ=18)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGc < 1:2900124/96‑1 (MQ=18)
caagcggACTCCCCCCGGGATATTGGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGc < 1:3882924/96‑1 (MQ=18)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.cccc > 2:508026/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.cccc > 1:421189/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.cccc > 2:630121/1‑101 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.ccccc > 1:4337870/1‑101 (MQ=255)
gcT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.cccccct < 2:2654579/100‑3 (MQ=255)
actccccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGCAGCG.ccc < 1:2070380/97‑1 (MQ=17)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.cccccct < 2:3414293/101‑3 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.cccccct > 1:3225093/1‑99 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.cccccctt > 2:1921007/1‑98 (MQ=255)
actacgccGGGATATTTGGGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATCTCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCT.cccccct < 2:1125168/95‑3 (MQ=25)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.ccccccttc > 2:594067/1‑97 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.ccccccttc > 1:1825755/1‑97 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.ccccccttcg < 2:3163756/101‑6 (MQ=255)
cccGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCGCCCCCCTTcgcg > 1:4389585/1‑101 (MQ=255)
ccGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCGCCCCCCTTCgcgg > 1:1603494/1‑101 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCGCCCCCCTTCgcgggc > 1:3009782/1‑101 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCGCCCCCCTTCgcgggc > 1:954626/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCGCCCCCCTTCgcgggcg > 1:3601854/1‑101 (MQ=255)
gATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCACGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCGCCCCCCTTCgccggcgg > 1:3619563/1‑101 (MQ=25)
atgtttGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCGCCCCCCTTCGCGggcggc < 2:1725741/98‑1 (MQ=255)
atTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCcg < 1:1026188/101‑1 (MQ=255)
ttGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAATGGCGCAGCCAGAGGGGGGTAGCGCCCCCCTCCGCGCGCGGCcgcc > 2:1098390/1‑100 (MQ=25)
ggCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGAcgc < 2:144875/101‑1 (MQ=255)
|
ATTGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.G.CCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAGCG.CCCCCTTCGCGGGCGGCCGCGACGC > NC_014034/2249218‑2249416
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|