Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,527,007 | A→G | 100% | P70P (CCT→CCC) | RCAP_rcc02356 ← | hypothetical protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,527,007 | 0 | A→G | 100.0% | 11.4 | 3 | P70P (CCT→CCC) | RCAP_rcc02356 | hypothetical protein |
Reads supporting (aligned to +/- strand): new base (3/0): ref base (0/0): total (3/0) |
CGGGGCGCAGGCGGTGCGGCAGGCGGGGGCTCGGCCGCGGGGCGGGCGACGCCCGCGGCTTCGGGCAGCGCCACGGCCTGCGCCGGGGCGGGATCG.GCGGGCGCGGTCCGGGGTG > NC_014034/2526987‑2527101
|
cGGGGCGCGGGCGGTGCGGCGGTCGGGGGCTCGGCCGCGGGGCGGGCGACGCCCGCGGCTTCGGGCAGCGCCACGGCCTGCGCCGGGGCGGGGTCg.gcggg > 1:4022614/1‑101 (MQ=255)
gggCGCGGGCGGTGCGGCGGGCGGGGGCCCGGCCGCGGGGGGGGGGGCGCCCGCGGCGTCGGGCAGCGCCACGGCCCTCGCCGGGGCGGGGTCg.gcggggg > 2:3975400/1‑99 (MQ=255)
gCGGCGGGCGGGGGCTCGGCCGCGGGGGGGGGGACGCCCGCGGGCTCGGGCAACGCCCCGGGCTGAGCCCGGGGGGGGTCGCGCGGGggcgcggggggggg > 2:1517433/1‑91 (MQ=255)
|
CGGGGCGCAGGCGGTGCGGCAGGCGGGGGCTCGGCCGCGGGGCGGGCGACGCCCGCGGCTTCGGGCAGCGCCACGGCCTGCGCCGGGGCGGGATCG.GCGGGCGCGGTCCGGGGTG > NC_014034/2526987‑2527101
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 18 ≤
ATCG
< 23 ≤
ATCG
< 37 ≤
ATCG
|