| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,561 | C→T | 2.8% | intergenic (+33/+161) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,561 | 0 | C→T | 2.8% | 2.9 ‑1.1 ‑0.8 | 145 | intergenic (+33/+161) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (2/2): ref base (39/102): total (41/104) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.17e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.77e-01 | ||||||||||
Only 100 of 160 total aligned reads displayed.
GCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GGGGGCGCT.GCCCCC.CTC.CTG..CTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCTTGCGGGCGGGGGC > NC_014034/2566472‑2566661
|
aTCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.c < 2:1593355/101‑1 (MQ=37)
cGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.ccc < 2:2502891/101‑1 (MQ=37)
aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGGGCGCGGTCTGAGACG.AAACGGGGGGCGCC.GGCCCC.CTC.TTGGCCTTGGGCCCATTCA.ccccc > 1:3689634/1‑101 (MQ=255)
aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.ccccc < 2:1832720/101‑1 (MQ=25)
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.cccccc < 2:193483/101‑1 (MQ=25)
cTGGCCAGAGGGGTTAAGCCGACACAACATCGGCTGGCGCGAGCTCTGAGAAG.AAACGGGGGGCGCT.GCCCCC.ATC.TTGGCCTTCGGCCAATTCA.cccccc < 2:4392946/101‑1 (MQ=12)
tgtcccGAGGTGTTCTGCCGCCGCGAGAGCGGCTGGCCCGCGCTCTGAGACG.AAGCGGGGGGCGCT.ACCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCg < 1:784225/98‑1 (MQ=16)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCg < 2:3257300/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCCATTCA.cccccccg > 2:3289298/1‑99 (MQ=25)
gCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCggg < 2:821208/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCCATTCA.CCCCCCCGGat > 2:3591090/1‑101 (MQ=25)
ccGAGGGGTTATGCCGCCGCGACCTCGGCTGGCGCGCGCTCTGAGTCG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGat < 1:3406132/101‑1 (MQ=21)
cgagctgTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGata < 2:658737/95‑1 (MQ=21)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGGGGTGGCCCCC.CCT.TTGC.CTTCGGCCCATTCA.CCCCCCcggcaat > 2:3764620/1‑97 (MQ=255)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGatat < 2:8710/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGatat < 2:832863/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGatat < 1:1022552/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGatat < 1:2581725/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCCGGatat > 1:2267035/1‑101 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGCCCAATTCA.CCCCCCGGGatat < 1:3286874/101‑1 (MQ=25)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTc < 2:716590/101‑1 (MQ=21)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTc < 1:149209/101‑1 (MQ=21)
ggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCg < 1:3372459/101‑1 (MQ=21)
ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCggg < 1:2045935/101‑1 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCaa < 1:1757897/101‑1 (MQ=21)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTCTTTGC.CTTCGGCCAATTCA.CCCCCCCGGATATTTCTGGGAAg > 2:3968143/1‑101 (MQ=21)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAg < 2:3544526/101‑1 (MQ=21)
ccgccgCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCC.CCCCCCGGGATATTTCGGGCAAGa < 1:4402108/101‑1 (MQ=21)
ccgccgCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGa < 1:768504/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 1:2301070/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATa < 1:1595489/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATa < 1:3625649/101‑1 (MQ=21)
ccgcGGCGTCGGCTGGCGCGCGCTGTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCCATTCC.CCCCCCGGGATATTTCGGGCAAGATaa < 2:2853815/101‑1 (MQ=18)
ccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATaa < 2:4182062/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATaaa < 2:3837105/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAAATaaa < 1:295598/101‑1 (MQ=21)
tcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATCTCGGGCAAGATAaag < 1:3750265/100‑1 (MQ=21)
gcgACATCGGCTGGCGCGCGCTCTGAGACGAAAAG.GGGGGCGCT.GCCCCC.CTC.TTGGCCTTCCGCCAATTCA.CCCCCCCGGGTATTTCGGGGAAGATaaaa > 2:3461737/1‑100 (MQ=18)
gcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGTCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAaag < 1:1358392/101‑1 (MQ=21)
gACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAaagaa < 2:3920021/101‑1 (MQ=21)
gACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAaagaa < 2:1061428/101‑1 (MQ=21)
gACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATAATTCGGGCAAGATAaagaa > 1:2318559/1‑101 (MQ=21)
aCATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAaaaaag > 1:1271813/1‑101 (MQ=21)
cATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAgg < 1:215566/101‑1 (MQ=21)
cGGCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCt < 2:1414892/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:3569336/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 2:1394035/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt > 2:1299253/1‑101 (MQ=21)
cTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 2:2134379/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 1:885005/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCGCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc < 1:2647695/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGGTAATTTGGGCAAGATAAAAAAggggctttt > 1:2392665/1‑94 (MQ=12)
tGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc < 1:2981142/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc > 2:3361660/1‑101 (MQ=21)
tGGCGCGCGCTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc > 1:3459804/1‑101 (MQ=21)
cgcgcgcTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCC.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:2822833/101‑1 (MQ=21)
cgcgcgcTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 2:1094175/101‑1 (MQ=21)
gcgcgcTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 1:3001361/101‑1 (MQ=21)
cgcgcTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 1:1807017/101‑1 (MQ=21)
cgcgcTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTc > 2:413218/1‑101 (MQ=21)
gcgcTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa < 2:124700/101‑1 (MQ=21)
cgcTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCCGGGAAATTTCGGGCAAAAAAAAAAAGGTTTTTTCTttttt > 1:3164572/1‑99 (MQ=12)
cgcTCTGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt < 1:3596700/101‑1 (MQ=21)
ctGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg > 2:2689914/1‑101 (MQ=21)
ctGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg > 1:1274440/1‑101 (MQ=21)
ctGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCAAATTCG.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg < 1:4265530/101‑1 (MQ=21)
tGAGACG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGAAATTTCCTGCAAGATAAAGAAGGTCTTTTTCTTTCATCTTGc > 1:495608/1‑101 (MQ=18)
gagaCG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc < 2:271613/101‑1 (MQ=21)
gagaCG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTGCCTTTCATCTTGcc < 1:519025/101‑1 (MQ=21)
agaCG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGccc < 2:4443182/101‑1 (MQ=21)
gaCG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCg > 1:1777787/1‑101 (MQ=21)
gaCG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCg < 2:2243119/101‑1 (MQ=21)
cG.AAACGGGGGGCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaa < 1:740473/101‑1 (MQ=21)
aaacggggggCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCT.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat < 1:4394270/96‑1 (MQ=21)
aaacggggggCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat < 1:661025/96‑1 (MQ=21)
aacggggggCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata > 1:2794101/5‑101 (MQ=25)
acggggggCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAatat < 1:1158219/98‑1 (MQ=25)
gggggCGCT.GCCCCCTCTT.GGC..CTTTGGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCg.ggggg < 1:3971574/101‑2 (MQ=0)
gggggCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc < 1:2729715/101‑1 (MQ=25)
gggggCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc < 1:3095488/101‑1 (MQ=25)
gggggCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATGCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc > 1:4105956/1‑101 (MQ=25)
ggggCGCT.GCCCCCTCTT.GGC..CTTTGGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCg.ggggga < 2:2846502/101‑3 (MQ=2)
gggCGCT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCg.g < 1:3108485/101‑1 (MQ=37)
gcT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGa < 1:2932405/101‑1 (MQ=37)
gcT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGa < 1:4128436/101‑1 (MQ=37)
cT.GCCCCC.CTC.TTGGCCTTCGGCCAATTCA.CCCCCCGGGATACTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAg > 2:3937016/1‑101 (MQ=37)
t.GCCCCC.CTC.TTGGCCTTCGGCCAACTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAAGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGc < 2:2564462/101‑1 (MQ=37)
ccccc.cTC.TGG..CTTC.GCC.ATTCA.CCCCCCGGGATATTTCGGGCACGATGA..AAGG.CATCCGGTTTCATCTTGCTGCAAATATCCCGAGGGGAGGCCGATTgc > 2:2946351/1‑101 (MQ=18)
ccctcttggccTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCt > 1:3981012/11‑101 (MQ=255)
cctcttggccTTCGTCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCtt < 2:3267489/92‑1 (MQ=37)
cctcttggccTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGCAATATCCCG.GGGGAGCCCGCtt > 2:4177887/10‑101 (MQ=37)
ctcttggccTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCTTg < 1:281610/93‑1 (MQ=255)
tcttggcctccGGCCAATTCC.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCTTgc < 2:1499170/91‑1 (MQ=38)
cttggccTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCTTgcg < 1:3958514/95‑1 (MQ=255)
cTTCGGGCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCTTGcgggcggg < 1:725245/101‑1 (MQ=255)
cTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCTTGcgggcggg > 2:2325259/1‑101 (MQ=255)
ctCGGCCAATTCA.CCCTCCCGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCTTGCGGGCgggg < 2:563537/100‑1 (MQ=255)
cGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCTTGCGGGCGGGGGc > 2:1158868/1‑101 (MQ=255)
cGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCTTGCGGGCGGGGGc > 2:1456184/1‑101 (MQ=255)
cGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCTTGCGGGCGGGGGc < 1:329854/101‑1 (MQ=255)
|
GCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GGGGGCGCT.GCCCCC.CTC.CTG..CTTCGGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCG.GGGGAGCCCGCTTGCGGGCGGGGGC > NC_014034/2566472‑2566661
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|