| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,461,382 | C→A | 90.9% | intergenic (‑92/+38) | RCAP_rcc03260 ← / ← RCAP_rcc03261 | NAD‑dependent epimerase/dehydratase/TOBE domain‑containing protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,461,382 | 0 | C→A | 90.9% | 14.2 ‑2.3 ‑0.9 | 103 | intergenic (‑92/+38) | RCAP_rcc03260/RCAP_rcc03261 | NAD‑dependent epimerase/dehydratase/TOBE domain‑containing protein |
| Reads supporting (aligned to +/- strand): new base (47/45): ref base (8/2): total (56/47) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.03e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.16e-01 | ||||||||||
Only 100 of 151 total aligned reads displayed.
CTTTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GG.GCAGCCGACCCCACCGGGCCGC.CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGC > NC_014034/3461284‑3461461
|
cTTTCATCGCAAGGCCCCCTTTTCGCTCCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGcca < 1:233802/101‑2 (MQ=255)
cTTTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGcca < 2:2391141/101‑2 (MQ=255)
cTTTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGcca > 1:2663269/1‑100 (MQ=255)
tttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccac > 2:512551/1‑99 (MQ=255)
tttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccac < 2:1503820/101‑3 (MQ=255)
tttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccac < 1:4034899/101‑3 (MQ=255)
ttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGTAG.GG.GGCGCAGccacc < 2:2592178/101‑4 (MQ=255)
ttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacc > 1:3579669/1‑98 (MQ=255)
ttCAGCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacc < 1:2431777/101‑4 (MQ=255)
tCATCGCAAGGCCCCCTTTTCGCACCCGCAGTTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccaccc > 1:3977250/1‑97 (MQ=255)
tCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccaccc < 1:2965627/101‑5 (MQ=255)
tCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccaccc > 2:1778441/1‑97 (MQ=255)
tCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccaccc > 2:663370/1‑97 (MQ=255)
cATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGTGG.GC.GCAGccacccg < 1:3749461/101‑6 (MQ=255)
cATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccg < 1:3106293/101‑6 (MQ=255)
aTCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccgg > 1:3999888/1‑95 (MQ=255)
aTCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccgg < 2:1574197/101‑7 (MQ=255)
aTCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGCTTGGCGCAGGGCCAAAGGAAG.GGCGC.GCAGccacccgg > 2:2208816/1‑95 (MQ=255)
aTCGCAAGGCCCCCGTTTCGCACCCGCAGGCTAGCGGGATCCACGGGCGCGGCCAGGCGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGCCGCccgg < 2:737691/101‑3 (MQ=255)
tCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccggc < 2:3489920/101‑8 (MQ=255)
cGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccggcc < 1:718726/101‑9 (MQ=255)
cGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccggcc > 2:4335737/1‑93 (MQ=255)
cGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccggcc > 1:3044255/1‑93 (MQ=255)
cGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccggcc > 1:3005057/1‑93 (MQ=255)
cGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccggcc < 1:2881134/101‑9 (MQ=255)
gCAAGGCCCCCTTTTCGCACCCTCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccggccg < 2:717123/101‑10 (MQ=255)
gCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccggccg > 2:1243038/1‑92 (MQ=255)
cAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGccacccggccgc > 2:1484451/1‑91 (MQ=255)
cGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGCC.ACCCGGCCGGgcccc.caaccccgg > 1:3733976/1‑93 (MQ=255)
cccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGt < 2:2107219/101‑1 (MQ=255)
ccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGtt < 2:2858808/101‑1 (MQ=255)
ccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGtt < 2:2679688/101‑1 (MQ=255)
ccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGtt > 2:533440/1‑101 (MQ=255)
ccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGtt < 2:4343925/101‑1 (MQ=255)
gCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCg < 2:1952006/101‑1 (MQ=255)
cAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGa < 1:2517397/101‑1 (MQ=255)
cAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGa > 2:2947658/1‑101 (MQ=255)
cAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGa < 1:663438/101‑1 (MQ=255)
aGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGAt > 2:202186/1‑101 (MQ=255)
aGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGAt < 2:3413417/101‑1 (MQ=255)
aGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGAt < 1:3417163/101‑1 (MQ=255)
gCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATc > 2:4416418/1‑101 (MQ=255)
gCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATc < 2:4437657/101‑1 (MQ=255)
gCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GC..AGCCAACC.GGCCGCGCCCCCAACCCCGGTCGTTCGATc > 1:3211255/1‑101 (MQ=255)
cTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCa < 1:4174863/101‑1 (MQ=255)
cTTAGAAAGATGCGCGGGGCCGCCCCGCCGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GGCCCAGCC.ACCCCGCCG...CG..CCCCCAACCCCGGTCGTTCGATCa < 2:567523/101‑1 (MQ=255)
tAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGt < 1:1442277/101‑1 (MQ=255)
tAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGt < 1:520629/101‑1 (MQ=255)
gCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTc > 2:3800219/1‑101 (MQ=255)
aGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCtt < 2:3955126/101‑1 (MQ=255)
gATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGc > 1:2642963/1‑101 (MQ=255)
aTGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGcc > 1:1754427/1‑101 (MQ=255)
aTGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGcc > 2:2675822/1‑101 (MQ=255)
aTGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGcc > 1:566592/1‑101 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg > 2:3434680/1‑101 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg < 2:1244882/101‑1 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg > 1:4204945/1‑101 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg > 1:2194690/1‑101 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg < 2:51690/101‑1 (MQ=255)
cACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgac < 1:3282765/101‑1 (MQ=255)
cACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgac < 2:2192517/101‑1 (MQ=255)
aCGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgacg > 1:1807860/1‑101 (MQ=255)
aCGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgacg > 2:3756480/1‑101 (MQ=255)
cGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGCTCAGTTCTTGCcgacga > 1:743932/1‑101 (MQ=255)
gggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGAt > 1:3089612/1‑101 (MQ=255)
gggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGAt > 1:485732/1‑101 (MQ=255)
ggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATg > 1:821679/1‑101 (MQ=255)
ggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATg < 1:2586714/101‑1 (MQ=255)
gcgcGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCTGGTCGTTCGATCAGTTCTTGCCGACGATGa < 2:3976994/101‑1 (MQ=255)
cgcgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGAc > 1:3910591/1‑101 (MQ=255)
gcgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACg < 2:698467/101‑1 (MQ=255)
gcgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACg < 1:4051574/101‑1 (MQ=255)
cgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGt < 2:2883855/101‑1 (MQ=255)
ggCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTc > 2:2125424/1‑101 (MQ=255)
ggCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTc > 2:1009380/1‑101 (MQ=255)
ggCCAGACGCAGTTTGGCCCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTc < 1:1693145/101‑1 (MQ=255)
gCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCa > 1:4394634/1‑101 (MQ=255)
gCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..AG.GG.GC.GC..AACCAACC.GGCGGCGGCCCCAACGCCGGTCGTTCGCTCAGTTCTTGCCGCCGCTGACGTCa > 2:2178736/1‑101 (MQ=255)
cAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCaga < 1:3936270/101‑1 (MQ=255)
cAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCaga < 1:1596684/101‑1 (MQ=255)
gACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAgg > 1:276565/1‑101 (MQ=255)
gACGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAgg > 2:4120964/1‑101 (MQ=255)
aCGCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCTGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGc < 2:2295402/101‑1 (MQ=255)
gCAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCt > 1:4432896/1‑101 (MQ=255)
cAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCtt > 2:1557234/1‑101 (MQ=255)
cAGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCtt < 1:274372/101‑1 (MQ=255)
aGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtg < 1:913877/101‑1 (MQ=255)
aGTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtg > 1:3418041/1‑101 (MQ=255)
gTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtga > 2:352415/1‑101 (MQ=255)
gTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtga > 1:1232571/1‑101 (MQ=255)
gTTTGGCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtga > 1:1066661/1‑101 (MQ=255)
tGGCGCAGGGCCAAATGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGGCGTTCGATCAGTTCTTGCCGACGGTGACATCAGGGACACtgatga > 2:2994113/1‑101 (MQ=255)
tGGCGCAGGGCCAAAGGAAG.GGAGC.GCAGCC.ACCCTGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtgatga < 2:743852/101‑1 (MQ=255)
tGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCCGTTCTTGCCGACGATGACGTCAGAGGCCTtgatga > 2:1792325/1‑101 (MQ=255)
tGGCGCAGGGCCAAAGGAAG.GG.GGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtgatga > 1:270951/1‑101 (MQ=255)
ggCGCAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTgatgat < 2:2798682/101‑1 (MQ=255)
cgcAGGGCCAAAGGAAG.GG.GGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcg > 1:1282155/1‑101 (MQ=255)
cgcAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcg > 2:2880198/1‑101 (MQ=255)
gcAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcgc > 2:4175234/1‑101 (MQ=255)
gcAGGGCCAAAGGAA..GG.GG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcgc < 1:363640/101‑1 (MQ=255)
|
CTTTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAG.GG.GG.GCAGCCGACCCCACCGGGCCGC.CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGC > NC_014034/3461284‑3461461
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|