Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 774,615 | C→G | 100% | intergenic (‑69/+51) | oppB1 ← / ← oppA1 | oligopeptide ABC transporter permease OppB/oligopeptide ABC transporter periplasmic oligopeptide‑binding protein OppA |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 774,615 | 0 | C→G | 100.0% | 11.5 | 3 | intergenic (‑69/+51) | oppB1/oppA1 | oligopeptide ABC transporter permease OppB/oligopeptide ABC transporter periplasmic oligopeptide‑binding protein OppA |
Reads supporting (aligned to +/- strand): new base (3/0): ref base (0/0): total (3/0) |
CGGGCCGCAGCGCCCCCCCCCCCCTGGGGAACCGGCCCTGCCGGT.CGA.CGTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTATT > NC_014034/774596‑774703
|
gcaggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCCGGTCCGACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGt > 2:420557/10‑101 (MQ=255)
caggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCCGGTCCGACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGtt > 1:2718900/9‑101 (MQ=255)
gcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCCGGTCCGACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTAtg > 2:1383497/1‑100 (MQ=255)
|
CGGGCCGCAGCGCCCCCCCCCCCCTGGGGAACCGGCCCTGCCGGT.CGA.CGTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTATT > NC_014034/774596‑774703
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 10 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 38 ≤
ATCG
|