| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,304,900 | 2 bp→CA | 100% | coding (2674‑2675/2808 nt) | RCAP_rcc02139 ← | methyl‑accepting chemotaxis protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,304,900 | 0 | A→C | 100.0% | 599.4 | 171 | V892G (GTA→GGA) | RCAP_rcc02139 | methyl‑accepting chemotaxis protein |
| Reads supporting (aligned to +/- strand): new base (72/99): ref base (0/0): total (72/99) | ||||||||||
| * | NC_014034 | 2,304,901 | 0 | C→A | 100.0% | 591.9 | 171 | V892L (GTA→TTA) | RCAP_rcc02139 | methyl‑accepting chemotaxis protein |
| Reads supporting (aligned to +/- strand): new base (72/99): ref base (0/0): total (72/99) | ||||||||||
Only 100 of 174 total aligned reads displayed.
ATAATCTTGCGCAAAACTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCGCCCTGCATGC.GAAGACC.G.C.GTACGCTCCCG.CA.GGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGTGACCTG > NC_014034/2304809‑2304988
||
aTAATCTTGCGCAAAACTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCg > 1:610156/1‑101 (MQ=255)
tAATCTTGCGCAAACCTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.c < 1:515124/101‑1 (MQ=255)
aaTCTTGCGCAAAACTCGGCCGGATCCGGCCTGTCAGCCGGCGTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.Ca > 2:2276797/1‑101 (MQ=255)
aaTCTTGCGCAAAACTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.Ca > 2:4141316/1‑101 (MQ=255)
aTCTTGCGCAAACCTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CA.g < 1:1549174/101‑1 (MQ=255)
aTCTTGCGCAAACCCCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CA.g < 1:3277092/101‑1 (MQ=255)
tCTTGCGCAAACCCGGGCCGAGTCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CA.gg < 2:4325987/101‑1 (MQ=255)
tCTTGCGCAAAACTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCTGCTGGCG.CCTGCATGCGGGAGACC.GCC.GTCAGCTCCCG.CA.gg > 2:1769368/1‑101 (MQ=255)
tGCGCAAAACTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CA.gggtc > 2:1660157/1‑98 (MQ=255)
tGCGAAAACCTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CA.gggtc < 2:3330584/101‑4 (MQ=255)
gcgcAAACCTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CA.gggtct < 2:1332496/101‑5 (MQ=255)
gcgcAAAACTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CA.gggtct > 2:1799642/1‑97 (MQ=255)
cgaaaaaCGCGGCCGGACCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CA.gggtctg < 1:109960/98‑6 (MQ=255)
cAAAACTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTgcg > 1:3667541/1‑101 (MQ=255)
aaaaCTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCGCCG.GGTCTgcgc > 1:3162833/1‑101 (MQ=255)
aaaaCTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTgcgc > 1:3915596/1‑101 (MQ=255)
accTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCt < 1:2506183/99‑1 (MQ=255)
cTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCg > 2:2646087/1‑101 (MQ=255)
cTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGGCTGCGCCTCg > 2:1235116/1‑101 (MQ=255)
cGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGcc > 1:3887043/1‑101 (MQ=255)
ggCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGccc > 2:2320140/1‑101 (MQ=255)
ggCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGccc < 2:3348117/101‑1 (MQ=255)
ggCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGccc < 1:3444749/101‑1 (MQ=255)
ggCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGccc > 2:434479/1‑101 (MQ=255)
gCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCca < 2:1927523/101‑1 (MQ=255)
gCCGGACCCGGCCTGCCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCca < 2:1285012/101‑1 (MQ=255)
ccGGACCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCcag < 2:2379206/101‑1 (MQ=255)
cGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCcagc < 1:3389620/101‑1 (MQ=255)
cGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCcagc > 2:3794350/1‑101 (MQ=255)
ggATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCcagca < 1:1265099/101‑1 (MQ=255)
gtgccGGCCGGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCcagcag < 1:460213/98‑1 (MQ=255)
gATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCcagcag > 1:4149768/1‑101 (MQ=255)
aTCGGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCagcagc < 1:2962098/101‑1 (MQ=255)
aTCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCagcagc < 1:3688199/101‑1 (MQ=255)
ccGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGCGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAgcgc > 1:2731578/1‑101 (MQ=255)
cgcccTGTCAGCCGCCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGcc < 1:1079309/98‑1 (MQ=255)
cGGCGTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGcc < 1:1457026/101‑1 (MQ=255)
ggCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCt > 1:3044714/1‑101 (MQ=255)
ggCCTGTCAGCCGCCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCt < 2:3651209/101‑1 (MQ=255)
ggCCTGCCGGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCt < 1:3723407/101‑1 (MQ=255)
ccTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGc > 2:331820/1‑101 (MQ=255)
ccTGCCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATTCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGc < 2:1872017/101‑1 (MQ=255)
cTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCg > 1:688750/1‑101 (MQ=255)
cAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTcgc > 1:758588/1‑101 (MQ=255)
cAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTcgc < 2:2833590/101‑1 (MQ=255)
cAGCCGCCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTcgc < 2:3548080/101‑1 (MQ=255)
cgCCGGCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTcgcg < 1:3948868/100‑1 (MQ=255)
ggCCTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCcg > 2:3943003/1‑101 (MQ=255)
ccTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCcgcg < 2:22239/101‑1 (MQ=255)
ccTGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCcgcg < 1:3785492/101‑1 (MQ=255)
tGCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCcgcggt > 1:911119/1‑99 (MQ=255)
gCCGCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGttt < 1:2320290/101‑1 (MQ=255)
ccGCAACGGCGGCGCCGGTGGCG.CCTGCATTCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGtttt < 1:1777363/101‑1 (MQ=255)
gCAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTcc < 1:2466094/101‑1 (MQ=255)
cAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCt > 1:2182722/1‑101 (MQ=255)
cAACGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCt > 2:182656/1‑101 (MQ=255)
aaCGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACCTC.C.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGGTTTCCTc > 2:390057/1‑101 (MQ=255)
aaCGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTc < 1:2752991/101‑1 (MQ=255)
aaCGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTc < 1:1918672/101‑1 (MQ=255)
aaCGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTc > 2:1186997/1‑101 (MQ=255)
aaCGGCGGCGCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGGTTTCCTc > 1:4253484/1‑101 (MQ=255)
ggcggcGCCGGTGGCG.CCTGCATGCGGAAGGCC.GCC.GTCAGCTGCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGaa < 1:288152/101‑1 (MQ=255)
gcggcgCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAAc < 1:3122769/101‑1 (MQ=255)
gcggcgCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAAc < 2:3473458/101‑1 (MQ=255)
gcggcgCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAAc < 2:2190246/101‑1 (MQ=255)
gggcgCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACa < 2:2780843/100‑1 (MQ=25)
cggcgCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACa > 1:1973146/1‑101 (MQ=255)
cggcgCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACa < 2:1900007/101‑1 (MQ=37)
ggcgCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACAt < 2:3915342/101‑1 (MQ=255)
ggcgCCGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACAt < 2:4294936/101‑1 (MQ=255)
ccGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATcgcc > 1:2965113/1‑101 (MQ=25)
cGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATcgccg < 2:754918/101‑1 (MQ=25)
cGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATcgccg < 1:2276942/101‑1 (MQ=25)
cGGTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATcgccg < 1:817882/101‑1 (MQ=25)
ggTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATcgccgc > 1:4072745/1‑101 (MQ=25)
ggTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATcgccgc > 1:2710671/1‑101 (MQ=25)
gTGGCG.CCTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTCCGCCGCGGCCGCGTTTTCCTCGAACATCGCCGCa > 1:383511/1‑101 (MQ=25)
tGGCG.CCTGCATGCGGAAGACC.G.CGGTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCAt < 1:1834542/101‑1 (MQ=25)
cgccTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATtgt < 1:1235209/99‑1 (MQ=25)
gccTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATtgtg > 1:3329215/2‑101 (MQ=21)
cTGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCt < 1:4369653/101‑1 (MQ=25)
tGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTg < 2:298647/101‑1 (MQ=25)
tGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTg < 2:3162609/101‑1 (MQ=25)
tGCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTg > 1:1508958/1‑101 (MQ=21)
gCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCTGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTgg > 1:768079/1‑101 (MQ=21)
gCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTgg < 2:420596/101‑1 (MQ=25)
gCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTgg < 1:1799761/101‑1 (MQ=25)
gCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTgg > 2:1340986/1‑101 (MQ=21)
gCATGCGGAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTgg < 1:1989373/101‑1 (MQ=25)
atgcggAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGt > 2:4224339/6‑101 (MQ=21)
atgcggAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGt < 1:4300742/96‑1 (MQ=25)
atgcggAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCCGGGt > 2:2017423/6‑101 (MQ=21)
tgcggAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGTg < 2:3886789/97‑1 (MQ=25)
cggAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCTGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGTGAc < 1:2121578/99‑1 (MQ=21)
cggAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGTGAc < 2:274042/99‑1 (MQ=25)
gAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGTGACCt > 2:620207/1‑101 (MQ=21)
gAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGTGACCt > 2:2820692/1‑101 (MQ=21)
gAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGTGACCt < 1:350596/101‑1 (MQ=21)
gAAGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGTGACCt > 2:2865112/1‑101 (MQ=21)
aaGACC.GCC.GTCAGCTCCCG.CAGGGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGTGACCTg < 2:1451017/101‑1 (MQ=21)
||
ATAATCTTGCGCAAAACTCGGCCGGATCCGGCCTGTCAGCCGGCCTGCCGCAACGGCGGCGCCGGTGGCGCCCTGCATGC.GAAGACC.G.C.GTACGCTCCCG.CA.GGTCTGCGCCTCGCCCAGCAGCGCCTGCGTCGCGGCCGCGTTTTCCTCGAACATCGCCGCATTGTGCTGGGTGACCTG > NC_014034/2304809‑2304988
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|