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[+] Show/hide bicluster #15 rows and columns.
bicluster 15
Desulfovibrio vulgaris Hildenborough
19x361
[+] Show/hide bicluster #15 rows (genes).
bicluster 15 genes
Desulfovibrio vulgaris Hildenborough
19
[+] Show/hide bicluster #15 rows (short gene names).
bicluster 15 short names
Desulfovibrio vulgaris Hildenborough
19
short_name
[+] Show/hide bicluster #15 rows (long gene names).
bicluster 15 long names
Desulfovibrio vulgaris Hildenborough
19
long_name
[+] Show/hide bicluster #15 rows (NCBI RefSeq gene IDs).
bicluster 15 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #15 gene upstream sequences.
bicluster 15 upstream sequences
Desulfovibrio vulgaris Hildenborough
19
upstream
[+] Show/hide bicluster #15 columns (arrays; conditions).
bicluster 15 arrays
Desulfovibrio vulgaris Hildenborough
361
[+] Show/hide bicluster #15 ratios.
bicluster 15 ratios
Desulfovibrio vulgaris Hildenborough
19x361
GENES X111.11 X111.13 X111.4 X111.7 X111.9 X116.11 X116.13 X116.4 X116.6 X116.7 X116.9 X121.10 X121.12 X121.13 X121.14 X121.15 X121.16 X121.2 X121.3 X121.4 X121.5 X121.6 X121.7 X121.8 X121.9 X123.1 X123.11 X123.13 X123.14 X123.2 X123.4 X123.6 X1258.100 X1258.101 X1258.102 X1258.103 X1258.104 X1258.105 X1258.106 X1258.107 X1258.109 X1258.11 X1258.111 X1258.112 X1258.113 X1258.114 X1258.115 X1258.116 X1258.117 X1258.118 X1258.119 X1258.12 X1258.120 X1258.13 X1258.14 X1258.15 X1258.19 X1258.2 X1258.21 X1258.22 X1258.23 X1258.25 X1258.28 X1258.29 X1258.3 X1258.30 X1258.31 X1258.32 X1258.33 X1258.34 X1258.35 X1258.36 X1258.37 X1258.38 X1258.40 X1258.41 X1258.42 X1258.46 X1258.49 X1258.50 X1258.51 X1258.52 X1258.53 X1258.55 X1258.57 X1258.59 X1258.61 X1258.62 X1258.64 X1258.69 X1258.7 X1258.70 X1258.71 X1258.72 X1258.74 X1258.75 X1258.76 X1258.78 X1258.79 X1258.80 X1258.81 X1258.82 X1258.83 X1258.85 X1258.86 X1258.87 X1258.88 X1258.89 X1258.9 X1258.91 X1258.92 X1258.93 X1258.94 X1258.95 X1258.96 X1258.98 X126.10 X126.11 X126.12 X126.13 X126.14 X126.15 X126.3 X126.5 X126.7 X126.9 X127.1 X1271.1 X1271.10 X1271.3 X1271.5 X1271.7 X129.2 X1305.3 X1305.4 X1311.1 X14.1 X14.10 X14.11 X14.12 X14.13 X14.2 X14.5 X14.6 X14.7 X14.8 X14.9 X1413.1 X1413.15 X1413.6 X1414.11 X1414.4 X1414.8 X1416.1 X1416.2 X1416.4 X1416.8 X1417.1 X1417.12 X1417.2 X1417.3 X1417.4 X1417.7 X1417.9 X15.1 X15.2 X16.1 X16.12 X16.14 X16.15 X16.16 X16.17 X16.4 X16.5 X16.6 X16.7 X16.8 X17.1 X1709.10 X1709.12 X1709.13 X1709.14 X1709.15 X1709.2 X1709.4 X1709.5 X1709.9 X1713.1 X1713.3 X1713.4 X1713.5 X1715.4 X1715.5 X1718.2 X1719.1 X1721.10 X1721.11 X1721.13 X1721.14 X1721.15 X1721.16 X1721.19 X1721.3 X1721.5 X1736.17 X1737.1 X1738.1 X1754.1 X1755.102 X1755.106 X1755.108 X1755.113 X1755.124 X1755.128 X1755.130 X1755.131 X1755.133 X1755.134 X1755.136 X1755.14 X1755.15 X1755.18 X1755.19 X1755.2 X1755.20 X1755.27 X1755.30 X1755.33 X1755.35 X1755.42 X1755.44 X1755.51 X1755.52 X1755.53 X1755.56 X1755.58 X1755.6 X1755.61 X1755.62 X1755.64 X1755.66 X1755.68 X1755.70 X1755.72 X1755.76 X1755.77 X1755.79 X1755.81 X1755.82 X1755.83 X1755.84 X1755.86 X1755.87 X1755.89 X1755.90 X1755.91 X1755.96 X1755.97 X177.5 X178.3 X178.5 X179.1 X193.3 X195.1 X20.2 X20.3 X22.2 X23.1 X23.2 X23.3 X23.4 X23.5 X23.6 X23.8 X23.9 X24.10 X24.2 X26.1 X27.1 X27.10 X27.11 X27.13 X27.14 X27.15 X27.16 X27.2 X27.5 X27.6 X27.7 X27.8 X28.2 X3.1 X30.1 X30.2 X31.1 X31.2 X32.1 X32.2 X32.3 X33.1 X33.4 X37.1 X37.6 X38.2 X38.7 X388.1 X41.1 X41.3 X42.1 X42.3 X42.4 X42.5 X426.1 X435.1 X435.10 X435.11 X435.2 X435.3 X435.6 X440.1 X450.2 X450.5 X451.1 X451.2 X56.3 X57.1 X57.2 X57.3 X59.1 X59.5 X59.6 X6.11 X6.12 X6.13 X6.14 X6.15 X6.16 X6.3 X6.4 X6.7 X65.1 X71.1 X71.2 X71.6 X71.7 X72.7 X73.1 X73.4 X73.5 X74.1 X74.4 X74.5 X75.1 X75.2 X75.3 X86.1 X86.10 X86.4 X86.7 X86.8 X86.9
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DVU3128 0.517736139010831 0.394021489871085 1.21254364721522 0.434556395601750 0.649359574049815 0.543479038225822 0.394979606509654 1.22786659562267 0.841809580018622 0.436401721329825 0.657956682010696 2.29670450732892 1.34963042243695 -1.33899013939158 0.642836079535946 1.56901837924034 1.00472226817132 1.3311235521313 2.23847384447580 0.789989997272317 1.09223083097812 1.82567084725537 0.86196115957207 2.48784358836626 1.70893280916254 -0.654213455201094 -0.591754281190387 0.428427216238772 1.14563805104249 -0.0122244614585985 0.489352365956318 1.26013298935153 -1.24214080408494 0.6806886045691 -0.58103513511484 -1.17631784512474 -1.85808009375381 -0.462036702714045 1.62178570191072 -0.715619392690342 -0.611248668825682 1.2406991325508 1.05213174725634 1.61946823567302 -2.62019788999632 -1.27221079324523 -0.66233669319994 -1.37468430780933 -0.0200000795217894 -0.732913916852243 0.538366776883563 0.0918982589295792 1.09977989077479 -0.513152398326961 -1.07146633348838 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DVUA0125 0.261258274198233 0.153162823764685 0.890883203144104 0.499994435414632 0.474530953381053 0.261551749750051 0.156132024770170 0.897831546842786 0.780121671993334 0.497172661094802 0.476085133768146 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.434298073083811 1.08962264232421 -1.15165290255044 -0.568499069434259 -1.36871182969756 -0.532882435563364 1.44298787400571 0.623630311899624 -0.858736745446023 1.50077362350457 2.23267133771035 1.59249506709395 -2.57728273103072 -1.51119489901505 0.469714096436656 -0.216588815136416 0.542237003223056 -0.710814044773709 0.0248197647668678 -0.68548834468934 0.675732555993547 -0.152691058370589 -0.876062825559234 -0.0541011570566779 0.0979095064923198 -0.405617382536169 1.83131251966038 -0.151293949405595 0.428759789853349 1.74249827519934 -0.76307198247024 0.0400481147033503 -0.193834126224314 0.170878826794162 -0.345518274110073 -0.41026063422456 0.750198188263814 2.02192006819808 -0.205719197163205 -0.826579816319801 0.330854692383404 1.87742813806111 -0.292674763129398 -0.447537540583441 0.268410535181746 1.72969833211769 0.230971046122797 1.62441914472600 0.336270900806866 -0.207973309852288 -0.550383498752072 0.057714378449162 1.73952218509639 0.510647735727582 1.60652126952357 -0.749709889035812 -0.89058366518652 0.347009625928327 1.62538361837048 -0.0233326841890397 1.41076067608539 -0.707948180230132 -0.896472465695775 -0.143411444091266 1.13941979440784 0.0351521709201070 -0.494033437163992 0.984876671075965 1.06417018284657 0.497506093411891 -1.27733621880070 1.81144436258424 1.25693126325043 -1.68480015502018 -0.230293985624377 2.41572843543133 0.346816731199432 -2.68413263264341 -1.69641517333862 0.644702683211867 0.204554113000682 1.6008446532161 -0.470795133610161 -0.655497347804707 NA NA NA NA NA NA NA NA NA NA 0.323490247198107 0.095878600560958 -0.093485328103173 0.0107023506868691 -0.179999027358247 -0.374671556743507 -2.1118553065979 0.3107178605063 0.912072689113176 1.79795550975654 -0.484060779680141 -0.261702758766386 -0.358679205898653 -0.195903611101455 0.219758351096053 -0.499384888071325 -1.62085555239162 -0.457259434919729 -0.473009289533973 -1.04894885978949 -0.870103756255883 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.73115000273457 -0.293917556311276 -0.268583589309955 -0.96734887818911 -0.0590853088438057 -1.4238824778004 -0.74425372384708 -0.106739951617216 -0.563103528303179 0.136040660936305 -0.475319892822232 NA -0.355667292488913 0.0423740117879715 -0.233275587005291 0.503583655191563 0.102807654786750 0.085827131802159 -0.203908742350581 0.170577084325391 0.138746698418798 -0.00282356548516928 -0.0886611687154683 -0.0309830269189487 -0.143925784107669 NA NA 0.212644669058318 0.41420450473876 -1.19860072392440 -1.69495468467699 -1.80796343941938 0.798836594154587 1.60492299891273 -0.370126130239055 -1.19302882189833 -2.03202444522538 -2.14386205339948 -0.0596613751734545 2.12651034584372 1.2020554685189 3.31047063540892 -1.04747872639142 -0.58831349155021 0.139365339370753 1.8096531972445 -2.2857636828913 -0.960422579602302 -0.0888880955858179 -0.660146110771066 0.382283182745688 1.05535076027761 -0.266483792403988 0.630541454472019 1.37689387296947 -0.276544630335333 1.20568877851958 0.0748738801857777 0.797163921291172 0.817743033225241 0.864405645964337 1.56240348938639 1.15127730895689 1.02148533498118 1.31294100342396 -1.41643674126507 -0.671047418592595 1.79227889344907 -0.0135314274500068 0.793694571810054 1.22196771581879 -1.47115546457450 -0.66008962017189 -1.60024337278974 -0.576245170618869 -1.52115653394296 -0.559040338620963 -0.968962304814364 0.656773759782192 -0.300305127476671 -1.13901554216886 -0.248395778111643 -1.10067220352309 -0.422852526562901 -2.26077003730453 0.69378061352062 -0.333032473872624 -1.11485272173582 -0.0570679882126362 -0.382285387256875 1.01292769811572 0.636729241811059 NA NA NA NA -0.81385014203225 1.3672215801349 -1.50062702351061 -1.63263590904912 NA 0.460784448308328 NA NA NA NA NA NA NA NA NA NA -0.746852291409188 -0.840098981176329 NA NA NA NA NA NA NA NA NA NA NA NA NA 0.292769005982658 NA NA 0.0935431965218413 0.68598215519531 0.792156925256865 0.275520083761005 NA -0.066733309280578 NA NA NA 0.104115205484757 -0.747475065819619 NA -0.810776226745366 NA NA NA 0.0333656901666446 -0.44155229270974 -1.00860217160220 -1.75814148658489 1.22526897132187 0.91857048583794 1.66810980082063 0.629644493982659 0 -0.0417877220376913 -1.16228829120999 3.07429859626732 1.63830756520641 -1.35839609516018 -0.416582070054335 -1.16179089837334 0.348081569493184 -0.912018403025187 -0.183968938660848 NA NA NA NA NA NA NA NA NA NA -0.245670451156261 0.233351918205153 -0.153064034107101 -0.151371658424950 -0.839791727429589 NA NA NA -0.568911037462398 0.940611464253132 NA NA NA NA -1.10269484253750 0.193957303286908 -0.319215700005802 -0.489961980564824 -1.15204006982772 -1.11747057877082
[+] Show/hide bicluster #15 motif PSSM #1. bicluster 15 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 21x4
POSITION A C G T
1 0.3 0.6 0 0.1
2 0.9 0.1 0 0
3 0.1 0.2 0.1 0.6
4 0.6 0 0 0.4
5 0 0.5 0.5 0
6 0.2 0.5 0 0.3
7 0.2 0.4 0 0.4
8 0.4 0.4 0.2 0
9 0.7 0 0.1 0.2
10 0.9 0.1 0 0
11 0 0.6 0.4 0
12 1 0 0 0
13 0.2 0.3 0 0.5
14 0.9 0 0 0.1
15 0.6 0.4 0 0
16 0 0.6 0.2 0.2
17 0.2 0.3 0.5 0
18 0.3 0 0.5 0.2
19 0 0.4 0.4 0.2
20 0.4 0.3 0 0.3
21 0.8 0 0 0.2 [+] Show/hide bicluster #15 motif PSSM #2. bicluster 15 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 15x4
POSITION A C G T
1 0.833333 0.166667 0 0
2 0.166667 0.833333 0 0
3 0 0 1 0
4 0 0 0.666667 0.333333
5 0.166667 0.166667 0.333333 0.333333
6 0 1 0 0
7 0 0.833333 0 0.166667
8 0 0.166667 0.833333 0
9 0 0.166667 0.333333 0.5
10 0 0 0 1
11 0.166667 0.833333 0 0
12 0 1 0 0
13 0 0 0 1
14 0 0.166667 0.833333 0
15 0 1 0 0 |