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[+] Show/hide bicluster #29 rows and columns.
bicluster 29
Desulfovibrio vulgaris Hildenborough
23x369
[+] Show/hide bicluster #29 rows (genes).
bicluster 29 genes
Desulfovibrio vulgaris Hildenborough
23
[+] Show/hide bicluster #29 rows (short gene names).
bicluster 29 short names
Desulfovibrio vulgaris Hildenborough
23
short_name
[+] Show/hide bicluster #29 rows (long gene names).
bicluster 29 long names
Desulfovibrio vulgaris Hildenborough
23
long_name
[+] Show/hide bicluster #29 rows (NCBI RefSeq gene IDs).
bicluster 29 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #29 gene upstream sequences.
bicluster 29 upstream sequences
Desulfovibrio vulgaris Hildenborough
23
upstream
[+] Show/hide bicluster #29 columns (arrays; conditions).
bicluster 29 arrays
Desulfovibrio vulgaris Hildenborough
369
[+] Show/hide bicluster #29 ratios.
bicluster 29 ratios
Desulfovibrio vulgaris Hildenborough
23x369
GENES X111.10 X111.3 X111.6 X111.8 X113.1 X115.1 X115.2 X115.3 X116.1 X116.10 X116.12 X116.13 X116.2 X116.3 X116.4 X116.5 X116.6 X116.7 X116.8 X116.9 X121.1 X121.10 X121.11 X121.12 X121.13 X121.14 X121.15 X121.16 X121.2 X121.4 X121.6 X121.8 X123.12 X123.13 X123.15 X123.16 X123.2 X123.4 X123.6 X123.7 X123.8 X123.9 X1258.1 X1258.10 X1258.100 X1258.101 X1258.102 X1258.103 X1258.104 X1258.105 X1258.106 X1258.108 X1258.109 X1258.11 X1258.110 X1258.111 X1258.112 X1258.113 X1258.114 X1258.115 X1258.116 X1258.117 X1258.118 X1258.119 X1258.12 X1258.120 X1258.14 X1258.15 X1258.18 X1258.19 X1258.20 X1258.21 X1258.23 X1258.24 X1258.25 X1258.26 X1258.28 X1258.29 X1258.31 X1258.32 X1258.34 X1258.35 X1258.36 X1258.37 X1258.38 X1258.40 X1258.41 X1258.42 X1258.45 X1258.46 X1258.47 X1258.5 X1258.50 X1258.57 X1258.58 X1258.6 X1258.60 X1258.64 X1258.65 X1258.66 X1258.67 X1258.68 X1258.7 X1258.70 X1258.71 X1258.72 X1258.73 X1258.74 X1258.75 X1258.76 X1258.78 X1258.79 X1258.80 X1258.81 X1258.82 X1258.83 X1258.84 X1258.85 X1258.87 X1258.88 X1258.89 X1258.90 X1258.91 X1258.94 X1258.95 X1258.96 X1258.99 X126.1 X126.11 X126.13 X126.15 X126.2 X126.4 X126.9 X1271.10 X1271.5 X1271.7 X129.2 X129.4 X1304.1 X1305.1 X1310.1 X1310.2 X1310.3 X132.1 X132.2 X14.10 X14.11 X14.13 X14.3 X14.4 X14.5 X14.9 X1413.1 X1413.11 X1413.14 X1413.15 X1413.17 X1413.3 X1413.4 X1413.7 X1413.8 X1414.1 X1414.10 X1414.3 X1414.6 X1414.8 X1414.9 X1416.2 X1416.4 X1416.6 X1416.7 X1416.8 X1417.11 X1417.9 X15.2 X16.1 X16.10 X16.11 X16.14 X16.17 X16.18 X16.2 X16.3 X16.4 X16.9 X1709.10 X1709.3 X1709.6 X1709.7 X1709.9 X1713.1 X1713.3 X1713.4 X1715.5 X1718.1 X1718.3 X1719.1 X1721.1 X1721.11 X1721.12 X1721.14 X1721.17 X1721.3 X1721.4 X1721.9 X1738.1 X175.3 X175.9 X1755.1 X1755.100 X1755.101 X1755.109 X1755.11 X1755.113 X1755.12 X1755.120 X1755.123 X1755.125 X1755.126 X1755.127 X1755.13 X1755.130 X1755.132 X1755.136 X1755.15 X1755.16 X1755.21 X1755.24 X1755.3 X1755.33 X1755.34 X1755.35 X1755.36 X1755.37 X1755.38 X1755.40 X1755.41 X1755.42 X1755.44 X1755.45 X1755.47 X1755.48 X1755.5 X1755.51 X1755.59 X1755.6 X1755.63 X1755.74 X1755.8 X1755.84 X1755.9 X1755.93 X177.1 X177.2 X177.3 X177.4 X177.5 X177.6 X177.7 X177.8 X178.1 X178.2 X179.1 X193.2 X193.3 X194.2 X194.3 X20.1 X22.2 X23.1 X23.2 X23.3 X23.4 X23.5 X23.6 X23.7 X23.8 X23.9 X24.1 X24.4 X24.5 X25.1 X25.3 X26.1 X27.10 X27.11 X27.12 X27.13 X27.14 X27.16 X27.3 X27.4 X27.5 X27.6 X27.7 X27.8 X27.9 X28.3 X3.2 X3.3 X3.4 X30.3 X30.4 X32.1 X32.2 X32.3 X33.1 X33.4 X37.1 X38.1 X38.2 X38.6 X38.7 X380.1 X388.1 X41.1 X41.2 X41.3 X41.4 X41.5 X41.6 X41.7 X42.2 X42.3 X42.4 X42.5 X426.1 X435.10 X450.2 X450.3 X451.3 X56.2 X56.4 X57.2 X57.3 X59.2 X59.3 X59.4 X59.5 X59.6 X59.7 X59.8 X59.9 X6.12 X6.16 X60.2 X60.3 X65.3 X65.4 X71.1 X71.2 X71.3 X71.4 X71.5 X71.6 X71.7 X71.8 X71.9 X72.1 X73.2 X73.3 X73.4 X73.5 X74.2 X86.1 X86.10 X86.4 X86.7
DVU0002 -0.8161791889629 -0.0520147638915137 -0.354956442896641 -0.92724922549494 -0.293525548857638 0.185861472726906 NA -0.677077497226459 0.184733602866946 -0.826634970955481 -0.282615977460359 -0.35017810819493 -0.929497853589863 -0.0513645581773192 -0.910213497134234 -0.197223986906860 -0.622988509376903 -0.438282675712334 -0.94168921073101 0.104870054128148 -0.0530713481770798 -3.81407116134002 0.00616848806461094 -1.73136405062025 -1.88026793214698 -2.81258503707573 -3.86959263365366 -3.35887636408244 -1.86367414048264 -2.70877224453077 -3.83985926818164 -4.69785989187082 -0.52779602227716 -3.10761587989149 0.373096166376239 0.225892352670399 -0.607065242355327 -2.41729721421451 -2.70017056477007 0.189342951812728 0.446713337824247 0.932193498113294 0.568907987747584 0.567072511200222 1.08568099127629 -0.0213094763362968 1.08084847276506 0.896240847255242 1.50009569889673 0.362497305261655 -0.682555141719738 0.338266644294815 0.53987562531118 -0.491643568621516 -0.335827864893372 -0.759059294268531 -0.602989603933279 1.53724378005224 0.627440047977469 0.177975865873846 0.623684432680377 -0.216950280058855 0.618006985389506 -0.161765763310643 0.502454931864047 -0.578981096585456 0.925032769036918 -0.0259777501749277 -0.116798281144332 -0.448596225204935 -0.551364286172663 -1.93204733511591 -0.749622845192474 0.189787259050761 -0.963411838614868 0.0772215800516686 0.506174989036145 -0.343398359029215 0.423534520059641 0.783433542330589 -1.87730475506406 0.80426213735743 1.08263484523505 0.309202279545916 -0.67340993061983 0.304337420073384 0.670165675025047 -0.256558644815205 0.294278026512295 -1.13628189638824 0.179123716013566 -0.0563003645754364 0.0650815282051571 -1.70078406312454 -0.15323858628803 -0.175348967058738 0.569129802717791 0.946049314153018 -0.123779526351686 0.109008173255543 -1.34577004993028 0.236860997966003 -1.56530760689354 0.892275269696274 -0.227258749819314 0.845714444881377 0.734986443646908 1.18706228536921 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-1.60777416760187 -1.04688877015078 0.679148334696407 0.00136983443433168 -1.04041719140169 -0.560294455278554 -2.25107144608307 -2.74473674809715 -3.14302161292224 0.29164587864064 -0.115717991442102 -2.02949353004272 0.406664729615579 0.471229818386284 -2.17343620651062 -3.07166830876558 -1.33512801109249 -2.01422046873533 0.0437551194283865 -2.37775996570815 -3.22441585427987 -1.41997816355083 -1.32988403427775 -2.17570515353411 0.427362944850771 0.300612283169144 -0.926429695376008 -1.25197956890177 -0.591497556583701 NA NA 1.53027946728536 0.0436281261248329 1.33365658201532 0.189653492771017 0.692089798950544 0.429675916219494 0.425138022172511 1.25114479958641 1.31492930285128 0.718942956297968 0.30371583018359 -0.500793859453566 0.231726543562735 -0.436709651992317 -0.97012893775083 -2.00362076099873 -0.352690882361244 -1.22134201110845 -1.63738900599057 -1.00218882054395 -0.683960534279065 -1.52814090005351 -1.03665649637245 0.252985053253206 2.06536321194245 0.359412891904944 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DVU0003 -0.378385355641567 -0.878427372975358 -0.762317572690076 -1.20315230069328 -0.168376396089563 0.372450920341223 -0.535131371921213 -0.412147301274163 -0.648761374063721 -0.366587336416386 -0.871688057614557 -0.71902653878606 -1.38186856939601 -0.868628374702004 -0.852944073183345 -0.328093531062377 -1.49414902152885 -0.326102944798110 -1.22700348844235 -0.243217378813446 0.914475118936836 -3.51986365081273 0.151148125012963 -1.5392661652897 -1.03592829379166 -1.99744471958908 -1.38378956948790 -3.17520123037379 -0.790343930781566 -1.26375342214323 -2.23081143766787 -1.95349999739913 -0.619986437451242 -1.12708617960124 0.242170634087194 0.928641176694614 -0.925857729799665 -1.13148486916402 -2.87292311492612 -0.41339985237689 -0.486608723057827 -0.639076244072433 0.211145744567965 0.343938935113441 0.8291308415283 -0.870850914874183 1.01063688314165 0.178580891967385 1.40446088002668 -0.251829194812667 -1.29385471337459 0.854997919604314 0.869267302284708 -1.31378166273616 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[+] Show/hide bicluster #29 motif PSSM #1. bicluster 29 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 15x4
POSITION A C G T
1 0.555556 0.333333 0 0.111111
2 0 1 0 0
3 0.666667 0.111111 0.222222 0
4 0.222222 0.555556 0 0.222222
5 0.111111 0.555556 0.111111 0.222222
6 0 0 1 0
7 1 0 0 0
8 1 0 0 0
9 0.444444 0 0.555556 0
10 0.555556 0.222222 0 0.222222
11 0 0 1 0
12 0.888889 0 0.111111 0
13 0.888889 0.111111 0 0
14 0.333333 0.333333 0.333333 0
15 0.666667 0 0 0.333333 [+] Show/hide bicluster #29 motif PSSM #2. bicluster 29 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 13x4
POSITION A C G T
1 1 0 0 0
2 0.5 0 0 0.5
3 0 1 0 0
4 0.5 0 0 0.5
5 0 0 0 1
6 1 0 0 0
7 1 0 0 0
8 1 0 0 0
9 0 0.5 0.5 0
10 0 0 0 1
11 1 0 0 0
12 0 0 0 1
13 1 0 0 0 |