DVU2467 DVU2467 Ribonuclease R | Syntrophy Portal

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Desulfovibrio vulgaris Hildenborough

Summary

	Locus Tag	Symbol	Synonyms	Product	Protein Synonyms	Start	End	Strand	PubMed ID
DVU2467	DVU2467	rnr	rnr, DVU2467	Ribonuclease R	Ribonuclease R (RNase R) (EC 3.1.13.1)	2575968	2573308	-	15077118

Regulatory Modules

	Residual	Motif 1	Expression Plot
bicluster_0004	0.45

XReference

Uniprot	NCBI Gene	NCBI Protein	GI Number	MicrobesOnline	EnsemblBacteria	InterPro	EggNOG	OrthoDB
Q728Y5	2795649	WP_010939737.1;YP_011679.1;	46580871	207961	AAS96939	IPR011129, IPR012340, IPR003029, IPR013223, IPR004476, IPR011805, IPR022967	COG0557	EOG6Q5NRD

Mutations

Line	Position	Effect	Impact	Class	Percent Frequency	Sample	Title

Transposon mutants

Title	Insert	TAG Module
GZ13401	198	TagModule_0321
GZ13410	198	TagModule_0321
GZ5133	345	TagModule_1061
GZ8662	1481	TagModule_2122
GZ14744	1538	TagModule_3479
GZ3032	1586	TagModule_3189
GZ13363	1724	TagModule_0198
GZ13579	1915	TagModule_1025
GZ3470	2431	TagModule_0240
GZ5839	2627	TagModule_0826

Homology

Orthologues	Paralogues

Functions

Catalytic Activity	COG	EC Description	Protein families
Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates. {ECO:0000256\|HAMAP-Rule:MF_01895, ECO:0000256\|SAAS:SAAS00089937}.	(K) COG557 \| Exoribonuclease R	(3.1.-.-, 3.1.13.1) Exoribonuclease II.	RNR ribonuclease family, RNase R subfamily

Essentiality

WT.MOLS4	WT.MOLS4_NO3	WT.MOYLS4.1	WT.MOYLS4.2

Product Synonyms

Product (LegacyBRC)	Product (RefSeq)

Operon

Refseq

GI Number	Accession	Blast	Conserved Domains
46580871	YP_011679.1	Run

GO Terms

GO:0003723 GO:0005737 GO:0008859 -

String Network

Link to STRINGS	STRINGS Network
DVU2467

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