DVU2894 DVU2894 Sigma-54 dependent transcriptional regulator

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Desulfovibrio vulgaris Hildenborough

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Summary

Locus Tag Synonyms Product Protein Synonyms Start End Strand PubMed ID
DVU2894 DVU2894 DVU2894 Sigma-54 dependent transcriptional regulator Sigma-54 dependent transcriptional regulator 2990682 2991731 + 15077118

Regulatory Modules

Residual Expression Plot
bicluster_0201 0.50

XReference

Uniprot NCBI Gene NCBI Protein GI Number MicrobesOnline EnsemblBacteria InterPro EggNOG OrthoDB
Q727G1 2793924 WP_010940154.1;YP_012106.1; 46581298 208403 AAS97366 IPR003593, IPR009057, IPR002197, IPR027417, IPR002078, IPR025662, IPR025943, IPR025944 COG2204 EOG6WHNMG

Mutations

Line Position Effect Impact Class Percent Frequency Sample Title
HR2 2 991 137 FRAME_SHIFT NONE 91 EP_HR2_10 Chr-DVU2894-2991137-EP_HR2_10
HA2 2 991 030 STOP_GAINED NONSENSE 100 HA2.152.05.D01 Chr-DVU2894-2991030-HA2.152.05.D01
HA2 2 991 030 STOP_GAINED NONSENSE 100 HA2.152.01.D01 Chr-DVU2894-2991030-HA2.152.01.D01
HA2 2 991 030 STOP_GAINED NONSENSE 100 HA2.152.02.D02 Chr-DVU2894-2991030-HA2.152.02.D02
HA2 2 991 030 STOP_GAINED NONSENSE 100 HA2.152.02.D03 Chr-DVU2894-2991030-HA2.152.02.D03
HA2 2 991 030 STOP_GAINED NONSENSE 100 HA2.152.01.D03 Chr-DVU2894-2991030-HA2.152.01.D03
HA2 2 991 030 STOP_GAINED NONSENSE 100 HA2.152.02.D01 Chr-DVU2894-2991030-HA2.152.02.D01
HA2 2 991 030 STOP_GAINED NONSENSE 98 HA2.152.08.D01 Chr-DVU2894-2991030-HA2.152.08.D01
HA2 2 991 030 STOP_GAINED NONSENSE 100 HA2.152.08.D03 Chr-DVU2894-2991030-HA2.152.08.D03
HA2 2 991 030 STOP_GAINED NONSENSE 100 HA2.152.05.D03 Chr-DVU2894-2991030-HA2.152.05.D03

Transposon mutants

Homology

Orthologues Paralogues

Functions

COG
(T) COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Essentiality

WT.MOLS4 WT.MOLS4_NO3 WT.MOYLS4.1 WT.MOYLS4.2
1.21 0.02 1.06 1.09

Product Synonyms

Product (LegacyBRC) Product (RefSeq)

Operon

Refseq

GI Number Accession Blast Conserved Domains
46581298 YP_012106.1 Run

GO Terms

String Network

Link to STRINGS STRINGS Network
DVU2894

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