Desulfovibrio vulgaris Hildenborough Module 201 Residual: 0.50

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Summary

Residual: 0.50 Score: -33.5536 version: dvh_cmonkey_11_Mar_02

Members

DVU0655 PHP domain protein

Details for DVU0655 - PHP domain protein

GO Terms: GO:0003677, GO:0006260, GO:0003887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0655

Tuberculist Genomic Region

DVU1030 Universal stress protein

Details for DVU1030 - Universal stress protein

GO Terms: GO:0005737, GO:0006950

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1030

Tuberculist Genomic Region

DVU1437 Uncharacterized protein

Details for DVU1437 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1437

Tuberculist Genomic Region

DVU1410 Conserved domain protein

Details for DVU1410 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1410

Tuberculist Genomic Region

DVU3213 Uncharacterized protein

Details for DVU3213 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3213

Tuberculist Genomic Region

DVU1438 Cobyrinic acid a,c-diamide synthase family protein

Details for DVU1438 - Cobyrinic acid a,c-diamide synthase family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1438

Tuberculist Genomic Region

DVUA0097 Radical SAM domain protein

Details for DVUA0097 - Radical SAM domain protein

GO Terms: GO:0051539, GO:0003824, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0097

Tuberculist Genomic Region

DVU2005 Uncharacterized protein

Details for DVU2005 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2005

Tuberculist Genomic Region

DVU0069 Uncharacterized protein

Details for DVU0069 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0069

Tuberculist Genomic Region

DVU2547 Transcriptional regulator, putative

Details for DVU2547 - Transcriptional regulator, putative

GO Terms: GO:0003677, GO:0005622, GO:0003700, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2547

Tuberculist Genomic Region

DVU0256 ATP-dependent RNA helicase, DEAD/DEAH box family

Details for DVU0256 - ATP-dependent RNA helicase, DEAD/DEAH box family

GO Terms: GO:0005524, GO:0004386, GO:0003676

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0256

Tuberculist Genomic Region

DVU2549 Uncharacterized protein

Details for DVU2549 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2549

Tuberculist Genomic Region

DVU0396 DNA-binding protein HU

Details for DVU0396 - DNA-binding protein HU

GO Terms: GO:0003677, GO:0030261

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0396

Tuberculist Genomic Region

DVU2550 Uncharacterized protein

Details for DVU2550 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2550

Tuberculist Genomic Region

DVU0803 Histidine kinase

Details for DVU0803 - Histidine kinase

GO Terms: GO:0005524, GO:0016020, GO:0000155

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0803

Tuberculist Genomic Region

DVU2894 Sigma-54 dependent transcriptional regulator

Details for DVU2894 - Sigma-54 dependent transcriptional regulator

GO Terms: GO:0005524, GO:0000160, GO:0006355, GO:0043565, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2894

Tuberculist Genomic Region

DVU0963 NADPH-dependent 7-cyano-7-deazaguanine reductase

Details for DVU0963 - NADPH-dependent 7-cyano-7-deazaguanine reductase

GO Terms: GO:0005737, GO:0046857, GO:0033739, GO:0008616

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0963

Tuberculist Genomic Region

DVU3337 Potassium-transporting ATPase C chain

Details for DVU3337 - Potassium-transporting ATPase C chain

GO Terms: GO:0005524, GO:0016021, GO:0005886, GO:0008556

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3337

Tuberculist Genomic Region

Displaying 1 - 18 of 18

Motifs

Motif 1: e-value: 1900 e-value: 10000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0118

Sigma-54 dependent transcriptional regulator/response regulator
 up-regulates 0.21

DVU0118

DVU0744

Sigma-54 dependent transcriptional regulator/response regulator
 up-regulates 0.16

DVU0744

DVU0813

Heat-inducible transcription repressor HrcA
 up-regulates 0.29

DVU0813

DVU1517

Transcriptional regulator cII, putative
 up-regulates 0.10

DVU1517

DVU1547

Sensory box protein
 up-regulates 0.12

DVU1547

DVU3142

Sigma-54 dependent transcriptional regulator
 up-regulates 0.14

DVU3142

GO Enrichment

Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0005737 cytoplasm 86 0.44 2 0.0470
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0005488 binding 789 4.93 8 0.0200
MF GO:0097159 organic cyclic compound binding 611 3.82 7 0.0260
MF GO:1901363 heterocyclic compound binding 611 3.82 7 0.0260

Comments

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