Desulfovibrio vulgaris Hildenborough Module 3 Residual: 0.40

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Summary

Residual: 0.40 Score: -59.3532 version: dvh_cmonkey_11_Mar_02

Members

DVU0230 Transcriptional regulator cII, putative

Details for DVU0230 - Transcriptional regulator cII, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0230

Tuberculist Genomic Region

DVU2343 Amino acid ABC transporter, ATP-binding protein

Details for DVU2343 - Amino acid ABC transporter, ATP-binding protein

GO Terms: GO:0005524, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2343

Tuberculist Genomic Region

DVU0426 Chromate transport family protein

Details for DVU0426 - Chromate transport family protein

GO Terms: GO:0015109

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0426

Tuberculist Genomic Region

DVU2432 Sensory box/GGDEF domain/EAL domain protein

Details for DVU2432 - Sensory box/GGDEF domain/EAL domain protein

GO Terms: GO:0000155

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2432

Tuberculist Genomic Region

DVU1482 Uncharacterized protein

Details for DVU1482 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1482

Tuberculist Genomic Region

DVU2567 Uncharacterized protein

Details for DVU2567 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2567

Tuberculist Genomic Region

DVU1699 Uncharacterized protein

Details for DVU1699 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1699

Tuberculist Genomic Region

DVU3078 Uncharacterized protein

Details for DVU3078 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3078

Tuberculist Genomic Region

DVU1957 Uncharacterized protein

Details for DVU1957 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1957

Tuberculist Genomic Region

DVU3249 Lipoprotein, putative

Details for DVU3249 - Lipoprotein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3249

Tuberculist Genomic Region

DVU2158 Uncharacterized protein

Details for DVU2158 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2158

Tuberculist Genomic Region

DVU3251 Membrane protein, HPP family

Details for DVU3251 - Membrane protein, HPP family

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3251

Tuberculist Genomic Region

DVU2249 Uncharacterized protein

Details for DVU2249 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2249

Tuberculist Genomic Region

DVUA0046 Glycosyl transferase, group 2 family protein

Details for DVUA0046 - Glycosyl transferase, group 2 family protein

GO Terms: GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0046

Tuberculist Genomic Region

DVU2296 Monofunctional biosynthetic peptidoglycan transglycosylase

Details for DVU2296 - Monofunctional biosynthetic peptidoglycan transglycosylase

GO Terms: GO:0071555, GO:0016021, GO:0009252, GO:0009274, GO:0005886, GO:0008360, GO:0016763

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2296

Tuberculist Genomic Region

Displaying 1 - 15 of 15

Motifs

Motif 1: e-value: 480 e-value: 2300

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0529

Protein rrf2
 up-regulates 0.24

DVU0529

DVU1402

Transcriptional regulator, LysR family
 up-regulates 0.11

DVU1402

DVU1561

Molybdenum-binding protein, HTH domain
 up-regulates 0.15

DVU1561

DVU1745

DNA-binding protein
 up-regulates 0.37

DVU1745

DVU3066

DNA-binding protein
 up-regulates 0.27

DVU3066

DVU3111

Transcriptional regulator, Crp/Fnr family
 up-regulates 0.40

DVU3111

DVU3142

Sigma-54 dependent transcriptional regulator
 up-regulates 0.31

DVU3142

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0071555 cell wall organization 5 0.01 1 0.0140
BP GO:0071554 cell wall organization or biogenesis 7 0.02 1 0.0190
BP GO:0045229 external encapsulating structure organiz... 9 0.02 1 0.0240
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0015103 inorganic anion transmembrane transporte... 5 0.02 1 0.0155
MF GO:0008509 anion transmembrane transporter activity 9 0.03 1 0.0278
MF GO:0000155 phosphorelay sensor kinase activity 12 0.04 1 0.0370
MF GO:0004672 protein kinase activity 12 0.04 1 0.0370
MF GO:0004673 protein histidine kinase activity 12 0.04 1 0.0370
MF GO:0004872 receptor activity 12 0.04 1 0.0370
MF GO:0016775 phosphotransferase activity, nitrogenous... 12 0.04 1 0.0370
MF GO:0038023 signaling receptor activity 12 0.04 1 0.0370
MF GO:0015075 ion transmembrane transporter activity 14 0.04 1 0.0431
MF GO:0016773 phosphotransferase activity, alcohol gro... 16 0.05 1 0.0491

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