Desulfovibrio vulgaris Hildenborough Module 59 Residual: 0.31 | Syntrophy Portal

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Summary

Residual: 0.31 Score: -99.2933 version: dvh_cmonkey_11_Mar_02

Members

DVU0860 Uncharacterized protein Details for DVU0860 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0860 Tuberculist Genomic Region	DVU2156 Uncharacterized protein Details for DVU2156 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2156 Tuberculist Genomic Region
DVU0889 Phosphonopyruvate decarboxylase-related protein Details for DVU0889 - Phosphonopyruvate decarboxylase-related protein GO Terms: GO:0016829, GO:0046872 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0889 Tuberculist Genomic Region	DVU2172 Uncharacterized protein Details for DVU2172 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2172 Tuberculist Genomic Region
DVU2122 Type II/IV secretion system protein Details for DVU2122 - Type II/IV secretion system protein GO Terms: GO:0005524, GO:0006810 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2122 Tuberculist Genomic Region	DVU3285 Uncharacterized protein Details for DVU3285 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3285 Tuberculist Genomic Region
DVU2129 Sensory box histidine kinase/response regulator Details for DVU2129 - Sensory box histidine kinase/response regulator GO Terms: GO:0016020, GO:0000155 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2129 Tuberculist Genomic Region	DVU2125 TPR domain protein Details for DVU2125 - TPR domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2125 Tuberculist Genomic Region
DVU2154 Tail assembly protein, putative Details for DVU2154 - Tail assembly protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2154 Tuberculist Genomic Region	DVU2170 Minor capsid protein C Details for DVU2170 - Minor capsid protein C GO Terms: GO:0008233 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2170 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 4000 Motif 2:

e-value: 4400

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0619 Sigma-54 dependent transcriptional regulator	down-regulates	-0.11	DVU0619
DVU0804 Sigma-54 dependent transcriptional regulator/response regulator	up-regulates	0.14	DVU0804
DVU1340 Transcriptional regulator, Fur family	down-regulates	-0.11	DVU1340
DVU2567 Uncharacterized protein	up-regulates	0.14	DVU2567
DVU2690 Uncharacterized protein	up-regulates	0.10	DVU2690
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.34	DVU2832
DVU3220 Sigma-54 dependent transcriptional regulator/response regulator	up-regulates	0.12	DVU3220
DVUA0057 Sigma-54 dependent transcriptional regulator/response regulator	up-regulates	0.12	DVUA0057
[field_regulator_taxonomy_regulat_1]	up-regulates	1.84	Oxygen

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0008233	peptidase activity	20	0.05	1	0.0460

Essentiality

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