Desulfovibrio vulgaris Hildenborough Module 61 Residual: 0.49

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Summary

Residual: 0.49 Score: -49.8185 version: dvh_cmonkey_11_Mar_02

Members

DVU0429 Ech hydrogenase, subunit EchF, putative

Details for DVU0429 - Ech hydrogenase, subunit EchF, putative

GO Terms: GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0429

Tuberculist Genomic Region

DVUA0024 Sigma-54 interaction domain protein

Details for DVUA0024 - Sigma-54 interaction domain protein

GO Terms: GO:0005524, GO:0003677, GO:0006355, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0024

Tuberculist Genomic Region

DVU0431 Ech hydrogenase, subunit EchD, putative

Details for DVU0431 - Ech hydrogenase, subunit EchD, putative

GO Terms: GO:0008137

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0431

Tuberculist Genomic Region

DVUA0035 Uncharacterized protein

Details for DVUA0035 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0035

Tuberculist Genomic Region

DVU0433 Ech hydrogenase, subunit EchB, putative

Details for DVU0433 - Ech hydrogenase, subunit EchB, putative

GO Terms: GO:0016021, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0433

Tuberculist Genomic Region

DVUA0047 Uncharacterized protein

Details for DVUA0047 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0047

Tuberculist Genomic Region

DVU0434 Ech hydrogenase, subunit EchA, putative

Details for DVU0434 - Ech hydrogenase, subunit EchA, putative

GO Terms: GO:0042773, GO:0008137, GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0434

Tuberculist Genomic Region

DVUA0064 Conserved domain protein

Details for DVUA0064 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0064

Tuberculist Genomic Region

DVU3286 Uncharacterized protein

Details for DVU3286 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3286

Tuberculist Genomic Region

DVUA0083 Uncharacterized protein

Details for DVUA0083 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0083

Tuberculist Genomic Region

DVUA0001 Uncharacterized protein

Details for DVUA0001 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0001

Tuberculist Genomic Region

DVUA0092 Uncharacterized protein

Details for DVUA0092 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0092

Tuberculist Genomic Region

DVUA0002 ParA family protein

Details for DVUA0002 - ParA family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0002

Tuberculist Genomic Region

DVUA0146 Uncharacterized protein

Details for DVUA0146 - Uncharacterized protein

GO Terms: GO:0005737, GO:0009405, GO:0050708

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0146

Tuberculist Genomic Region

DVUA0003 Uncharacterized protein

Details for DVUA0003 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0003

Tuberculist Genomic Region

DVUA0148 Major facilitator superfamily protein

Details for DVUA0148 - Major facilitator superfamily protein

GO Terms: GO:0016021, GO:0055085

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0148

Tuberculist Genomic Region

DVUA0021 Uncharacterized protein

Details for DVUA0021 - Uncharacterized protein

GO Terms: GO:0016020, GO:0055085

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0021

Tuberculist Genomic Region

DVUA0149 Uncharacterized protein

Details for DVUA0149 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0149

Tuberculist Genomic Region

DVUA0022 ABC transporter, ATP-binding protein

Details for DVUA0022 - ABC transporter, ATP-binding protein

GO Terms: GO:0005524, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0022

Tuberculist Genomic Region

DVUA0046 Glycosyl transferase, group 2 family protein

Details for DVUA0046 - Glycosyl transferase, group 2 family protein

GO Terms: GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0046

Tuberculist Genomic Region

Displaying 1 - 20 of 20

Motifs

Motif 1: e-value: 23 e-value: 30

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU1628

RNA polymerase sigma-54 factor
 down-regulates -0.15

DVU1628

DVU2577

DNA-binding response regulator, LuxR family
 down-regulates -0.11

DVU2577

DVU2690

Uncharacterized protein
 up-regulates 0.13

DVU2690

DVU3111

Transcriptional regulator, Crp/Fnr family
 up-regulates 0.14

DVU3111

DVUA0151

DNA-binding protein, putative
 up-regulates 0.11

DVUA0151

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0009141 nucleoside triphosphate metabolic proces... 4 0.01 1 0.0108
BP GO:0009199 ribonucleoside triphosphate metabolic pr... 4 0.01 1 0.0108
BP GO:0045333 cellular respiration 5 0.01 1 0.0136
BP GO:0015980 energy derivation by oxidation of organi... 6 0.02 1 0.0163
BP GO:0022900 electron transport chain 6 0.02 1 0.0163
BP GO:0042278 purine nucleoside metabolic process 8 0.02 1 0.0217
BP GO:0046128 purine ribonucleoside metabolic process 8 0.02 1 0.0217
BP GO:0006091 generation of precursor metabolites and ... 11 0.03 1 0.0298
BP GO:0055114 oxidation-reduction process 13 0.04 1 0.0352
BP GO:0009119 ribonucleoside metabolic process 16 0.04 1 0.0434
BP GO:0006163 purine nucleotide metabolic process 18 0.05 1 0.0488
BP GO:0009126 purine nucleoside monophosphate metaboli... 18 0.05 1 0.0488
BP GO:0009150 purine ribonucleotide metabolic process 18 0.05 1 0.0488
BP GO:0009167 purine ribonucleoside monophosphate meta... 18 0.05 1 0.0488
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016651 oxidoreductase activity, acting on NAD(P... 3 0.01 1 0.0117
MF GO:0016655 oxidoreductase activity, acting on NAD(P... 3 0.01 1 0.0117

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