Desulfovibrio vulgaris Hildenborough Module 63 Residual: 0.47

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Summary

Residual: 0.47 Score: -34.1595 version: dvh_cmonkey_11_Mar_02

Members

DVU0056 Chemotaxis protein CheV

Details for DVU0056 - Chemotaxis protein CheV

GO Terms: GO:0006935, GO:0005622, GO:0000160, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0056

Tuberculist Genomic Region

DVU1616 Uncharacterized protein

Details for DVU1616 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1616

Tuberculist Genomic Region

DVU0227 Uncharacterized protein

Details for DVU0227 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0227

Tuberculist Genomic Region

DVU1820 Preprotein translocase, YajC subunit

Details for DVU1820 - Preprotein translocase, YajC subunit

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1820

Tuberculist Genomic Region

DVU0334 D-alanine--D-alanine ligase

Details for DVU0334 - D-alanine--D-alanine ligase

GO Terms: GO:0005524, GO:0008716, GO:0071555, GO:0005737, GO:0000287, GO:0030145, GO:0009252, GO:0008360

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0334

Tuberculist Genomic Region

DVU1877 Polysaccharide deacetylase family protein

Details for DVU1877 - Polysaccharide deacetylase family protein

GO Terms: GO:0005975, GO:0016810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1877

Tuberculist Genomic Region

DVU0395 HIT family protein

Details for DVU0395 - HIT family protein

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0395

Tuberculist Genomic Region

DVU1888 NAD kinase

Details for DVU1888 - NAD kinase

GO Terms: GO:0005524, GO:0019674, GO:0003951, GO:0006741, GO:0005737, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1888

Tuberculist Genomic Region

DVU0454 Uncharacterized protein

Details for DVU0454 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0454

Tuberculist Genomic Region

DVU2471 Oxidoreductase, selenocysteine-containing

Details for DVU2471 - Oxidoreductase, selenocysteine-containing

GO Terms: GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2471

Tuberculist Genomic Region

DVU0575 Uncharacterized protein

Details for DVU0575 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0575

Tuberculist Genomic Region

DVU2612 Uncharacterized protein

Details for DVU2612 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2612

Tuberculist Genomic Region

DVU0619 Sigma-54 dependent transcriptional regulator

Details for DVU0619 - Sigma-54 dependent transcriptional regulator

GO Terms: GO:0005524, GO:0000160, GO:0006355, GO:0043565, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0619

Tuberculist Genomic Region

DVU2644 Transcriptional regulator, GntR family

Details for DVU2644 - Transcriptional regulator, GntR family

GO Terms: GO:0003677, GO:0003700, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2644

Tuberculist Genomic Region

DVU0620 Endoribonuclease, L-PSP family

Details for DVU0620 - Endoribonuclease, L-PSP family

GO Terms: GO:0019239

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0620

Tuberculist Genomic Region

DVU3345 Uncharacterized protein

Details for DVU3345 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3345

Tuberculist Genomic Region

DVU0656 UPF0434 protein DVU_0656

Details for DVU0656 - UPF0434 protein DVU_0656

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0656

Tuberculist Genomic Region

DVU0034 DSBA-like thioredoxin domain protein

Details for DVU0034 - DSBA-like thioredoxin domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0034

Tuberculist Genomic Region

DVU0854 NirD protein, putative

Details for DVU0854 - NirD protein, putative

GO Terms: GO:0006355, GO:0043565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0854

Tuberculist Genomic Region

DVU1434 Uncharacterized protein

Details for DVU1434 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1434

Tuberculist Genomic Region

DVU1090 Protein RecA

Details for DVU1090 - Protein RecA

GO Terms: GO:0005524, GO:0006310, GO:0006281, GO:0008094, GO:0009432, GO:0005737, GO:0003684, GO:0003697

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1090

Tuberculist Genomic Region

DVU2639 Uncharacterized protein

Details for DVU2639 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2639

Tuberculist Genomic Region

DVU1408 Uncharacterized protein

Details for DVU1408 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1408

Tuberculist Genomic Region

DVU3281 Uncharacterized protein

Details for DVU3281 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3281

Tuberculist Genomic Region

DVU1537 Lipoprotein, putative

Details for DVU1537 - Lipoprotein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1537

Tuberculist Genomic Region

DVU3359 Uncharacterized protein

Details for DVU3359 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3359

Tuberculist Genomic Region

DVU1579 Cysteine--tRNA ligase

Details for DVU1579 - Cysteine--tRNA ligase

GO Terms: GO:0005524, GO:0004817, GO:0006423, GO:0005737, GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1579

Tuberculist Genomic Region

Displaying 1 - 27 of 27

Motifs

Motif 1: e-value: 1.2 e-value: 390

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0813

Heat-inducible transcription repressor HrcA
 up-regulates 0.18

DVU0813

DVU2111

Transcriptional regulator, LysR family
 down-regulates -0.13

DVU2111

DVU2114

Sigma-54 dependent transcriptional regulator/response regulator
 up-regulates 0.16

DVU2114

DVU2423

Transcriptional regulator, putative
 down-regulates -0.17

DVU2423

DVU2836

Uncharacterized protein
 up-regulates 0.17

DVU2836

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0019239 deaminase activity 4 0.03 1 0.0280
MF GO:0005524 ATP binding 301 2.11 5 0.0380
MF GO:0032559 adenyl ribonucleotide binding 303 2.13 5 0.0390
MF GO:0030554 adenyl nucleotide binding 304 2.14 5 0.0390

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