Desulfovibrio vulgaris Hildenborough Module 118 Residual: 0.45 | Syntrophy Portal

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Summary

Residual: 0.45 Score: -35.1555 version: dvh_cmonkey_11_Mar_02

Members

DVU1098 Methyltransferase Details for DVU1098 - Methyltransferase GO Terms: GO:0003677, GO:0006306, GO:0008170 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1098 Tuberculist Genomic Region	DVU0609 Lipoprotein, putative Details for DVU0609 - Lipoprotein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0609 Tuberculist Genomic Region
DVU1110 Uncharacterized protein Details for DVU1110 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1110 Tuberculist Genomic Region	DVU1356 HD domain protein Details for DVU1356 - HD domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1356 Tuberculist Genomic Region
DVU1703 Type I restriction-modification enzyme, R subunit Details for DVU1703 - Type I restriction-modification enzyme, R subunit GO Terms: GO:0005524, GO:0003677, GO:0009307, GO:0009035 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1703 Tuberculist Genomic Region	DVU1598 Uncharacterized protein Details for DVU1598 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1598 Tuberculist Genomic Region
DVU1753 Uncharacterized protein Details for DVU1753 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1753 Tuberculist Genomic Region	DVU1702 Uncharacterized protein Details for DVU1702 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1702 Tuberculist Genomic Region
DVU1755 Uncharacterized protein Details for DVU1755 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1755 Tuberculist Genomic Region	DVU1871 Aspartate ammonia-lyase Details for DVU1871 - Aspartate ammonia-lyase GO Terms: GO:0008797, GO:0006099 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1871 Tuberculist Genomic Region
DVU2132 Uncharacterized protein Details for DVU2132 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2132 Tuberculist Genomic Region	DVU2196 Uncharacterized protein Details for DVU2196 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2196 Tuberculist Genomic Region
DVU2133 UPF0324 membrane protein DVU_2133 Details for DVU2133 - UPF0324 membrane protein DVU_2133 GO Terms: GO:0016021, GO:0005886 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2133 Tuberculist Genomic Region	DVU2270 Uncharacterized protein Details for DVU2270 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2270 Tuberculist Genomic Region
DVU2207 Uncharacterized protein Details for DVU2207 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2207 Tuberculist Genomic Region	DVU2808 TonB domain protein Details for DVU2808 - TonB domain protein GO Terms: GO:0006810 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2808 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 15000 Motif 2:

e-value: 38000

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0110 Sigma-54 dependent transcriptional regulator/response regulator	down-regulates	-0.11	DVU0110
DVU1063 Transcriptional regulatory protein	up-regulates	0.16	DVU1063
DVU1561 Molybdenum-binding protein, HTH domain	up-regulates	0.23	DVU1561
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.14	DVU2832
DVU2886 Transcriptional regulator, AraC family	down-regulates	-0.30	DVU2886
DVU3142 Sigma-54 dependent transcriptional regulator	up-regulates	0.18	DVU3142

GO Enrichment

Category:
Annotated

Essentiality

Comments

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