Desulfovibrio vulgaris Hildenborough Module 129 Residual: 0.40 | Syntrophy Portal

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Summary

Residual: 0.40 Score: -75.705 version: dvh_cmonkey_11_Mar_02

Members

DVU1496 Uncharacterized protein Details for DVU1496 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1496 Tuberculist Genomic Region	DVU1524 Uncharacterized protein Details for DVU1524 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1524 Tuberculist Genomic Region
DVU1498 Uncharacterized protein Details for DVU1498 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1498 Tuberculist Genomic Region	DVU1493 Uncharacterized protein Details for DVU1493 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1493 Tuberculist Genomic Region
DVU1499 Uncharacterized protein Details for DVU1499 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1499 Tuberculist Genomic Region	DVU1513 Uncharacterized protein Details for DVU1513 - Uncharacterized protein GO Terms: GO:0003677, GO:0004536 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1513 Tuberculist Genomic Region
DVU1500 Major capsid protein, HK97 family Details for DVU1500 - Major capsid protein, HK97 family GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1500 Tuberculist Genomic Region	DVU1515 Cytosine-specific methyltransferase Details for DVU1515 - Cytosine-specific methyltransferase GO Terms: GO:0003886, GO:0003677, GO:0009307 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1515 Tuberculist Genomic Region
DVU1502 Portal protein, HK97 family Details for DVU1502 - Portal protein, HK97 family GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1502 Tuberculist Genomic Region	DVU1516 Uncharacterized protein Details for DVU1516 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1516 Tuberculist Genomic Region
DVU1514 Uncharacterized protein Details for DVU1514 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1514 Tuberculist Genomic Region	DVU1517 Transcriptional regulator cII, putative Details for DVU1517 - Transcriptional regulator cII, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1517 Tuberculist Genomic Region
DVU1522 Uncharacterized protein Details for DVU1522 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1522 Tuberculist Genomic Region	DVU1525 Conserved domain protein Details for DVU1525 - Conserved domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1525 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 1000 Motif 2:

e-value: 2100

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1156 Sigma-54 dependent transcriptional regulator, putative/response regulator	up-regulates	0.16	DVU1156
DVU2097 Transcriptional regulator, putative	down-regulates	-0.22	DVU2097
DVU2588 DNA-binding response regulator	up-regulates	0.12	DVU2588
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.37	DVU2832

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0003886	DNA (cytosine-5-)-methyltransferase acti...	3	0.00	1	0.0047
MF	GO:0009008	DNA-methyltransferase activity	3	0.00	1	0.0047
MF	GO:0008757	S-adenosylmethionine-dependent methyltra...	9	0.01	1	0.0140
MF	GO:0008168	methyltransferase activity	27	0.04	1	0.0417
MF	GO:0016741	transferase activity, transferring one-c...	30	0.05	1	0.0463

Essentiality

Comments

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