Desulfovibrio vulgaris Hildenborough Module 148 Residual: 0.45

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Summary

Residual: 0.45 Score: -38.2629 version: dvh_cmonkey_11_Mar_02

Members

DVU0174 Uncharacterized protein

Details for DVU0174 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0174

Tuberculist Genomic Region

DVU0305 Ferredoxin II

Details for DVU0305 - Ferredoxin II

GO Terms: GO:0009055, GO:0005506, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0305

Tuberculist Genomic Region

DVU0220 Tail fiber protein, putative

Details for DVU0220 - Tail fiber protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0220

Tuberculist Genomic Region

DVU0883 Glutaredoxin, putative

Details for DVU0883 - Glutaredoxin, putative

GO Terms: GO:0045454, GO:0009055, GO:0015035

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0883

Tuberculist Genomic Region

DVU0253 Oxidoreductase, FAD/iron-sulfur cluster-binding domain protein

Details for DVU0253 - Oxidoreductase, FAD/iron-sulfur cluster-binding domain protein

GO Terms: GO:0051539, GO:0008762, GO:0050660, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0253

Tuberculist Genomic Region

DVU1568 Ferritin

Details for DVU1568 - Ferritin

GO Terms: GO:0006879, GO:0005737, GO:0008199, GO:0006826

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1568

Tuberculist Genomic Region

DVU0278 Glyoxalase family protein

Details for DVU0278 - Glyoxalase family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0278

Tuberculist Genomic Region

DVU1812 Cytochrome c oxidase, subunit II, putative

Details for DVU1812 - Cytochrome c oxidase, subunit II, putative

GO Terms: GO:0005507, GO:0004129, GO:0022900, GO:0020037, GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1812

Tuberculist Genomic Region

DVU1569 Pyruvate ferredoxin oxidoreductase, alpha subunit

Details for DVU1569 - Pyruvate ferredoxin oxidoreductase, alpha subunit

GO Terms: GO:0019164

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1569

Tuberculist Genomic Region

DVU1904 Chemotaxis protein CheW

Details for DVU1904 - Chemotaxis protein CheW

GO Terms: GO:0006935, GO:0005622, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1904

Tuberculist Genomic Region

DVU1816 Uncharacterized protein

Details for DVU1816 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1816

Tuberculist Genomic Region

DVU2076 Chemotaxis protein methyltransferase

Details for DVU2076 - Chemotaxis protein methyltransferase

GO Terms: GO:0008983

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2076

Tuberculist Genomic Region

DVU2202 Peptidoglycan lytic exotransglycosylase

Details for DVU2202 - Peptidoglycan lytic exotransglycosylase

GO Terms: GO:0016837, GO:0009279, GO:0071555

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2202

Tuberculist Genomic Region

DVU2583 Lipoprotein, putative

Details for DVU2583 - Lipoprotein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2583

Tuberculist Genomic Region

DVU2557 Bifunctional ligase/repressor BirA

Details for DVU2557 - Bifunctional ligase/repressor BirA

GO Terms: GO:0004077, GO:0006464, GO:0003700

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2557

Tuberculist Genomic Region

DVU2616 Sensory box histidine kinase/response regulator

Details for DVU2616 - Sensory box histidine kinase/response regulator

GO Terms: GO:0016020, GO:0000155, GO:0042558, GO:0006355

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2616

Tuberculist Genomic Region

DVU2968 Sensor histidine kinase/response regulator

Details for DVU2968 - Sensor histidine kinase/response regulator

GO Terms: GO:0016020, GO:0000155

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2968

Tuberculist Genomic Region

DVU2684 Uncharacterized protein

Details for DVU2684 - Uncharacterized protein

GO Terms: GO:0010181, GO:0035438, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2684

Tuberculist Genomic Region

DVU3263 Fumarate reductase, iron-sulfur protein

Details for DVU3263 - Fumarate reductase, iron-sulfur protein

GO Terms: GO:0051537, GO:0009055, GO:0000104, GO:0006099

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3263

Tuberculist Genomic Region

DVU2935 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

Details for DVU2935 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

GO Terms: GO:0046538, GO:0006096

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2935

Tuberculist Genomic Region

DVU0006 Universal stress protein family

Details for DVU0006 - Universal stress protein family

GO Terms: GO:0006950

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0006

Tuberculist Genomic Region

DVU3227 Flagellar basal body-associated protein, putative

Details for DVU3227 - Flagellar basal body-associated protein, putative

GO Terms: GO:0009425, GO:0071973, GO:0006935

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3227

Tuberculist Genomic Region

DVU0138 Response regulator

Details for DVU0138 - Response regulator

GO Terms: GO:0000160

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0138

Tuberculist Genomic Region

DVU3296 Membrane protein, putative

Details for DVU3296 - Membrane protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3296

Tuberculist Genomic Region

DVU0238 Uncharacterized protein

Details for DVU0238 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0238

Tuberculist Genomic Region

Displaying 1 - 25 of 25

Motifs

Motif 1: e-value: 0.029 e-value: 2.7

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU1063

Transcriptional regulatory protein
 down-regulates -0.11

DVU1063

DVU2114

Sigma-54 dependent transcriptional regulator/response regulator
 up-regulates 0.10

DVU2114

DVU2394

Sigma-54 dependent transcriptional regulator/response regulator
 up-regulates 0.14

DVU2394

DVU2836

Uncharacterized protein
 up-regulates 0.14

DVU2836

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0019725 cellular homeostasis 11 0.15 2 0.0077
BP GO:0042592 homeostatic process 11 0.15 2 0.0077
BP GO:0065008 regulation of biological quality 12 0.16 2 0.0092
BP GO:0065007 biological regulation 55 0.75 3 0.0252
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0005507 copper ion binding 3 0.02 1 0.0233
MF GO:0008276 protein methyltransferase activity 3 0.02 1 0.0233
MF GO:0016866 intramolecular transferase activity 3 0.02 1 0.0233
MF GO:0016879 ligase activity, forming carbon-nitrogen... 6 0.05 1 0.0460

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