Desulfovibrio vulgaris Hildenborough Module 152 Residual: 0.43 | Syntrophy Portal

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Summary

Residual: 0.43 Score: -82.0967 version: dvh_cmonkey_11_Mar_02

Members

DVU1486 Tail fiber protein, truncation Details for DVU1486 - Tail fiber protein, truncation GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1486 Tuberculist Genomic Region	DVU1487 Conserved domain protein Details for DVU1487 - Conserved domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1487 Tuberculist Genomic Region
DVU1494 Uncharacterized protein Details for DVU1494 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1494 Tuberculist Genomic Region	DVU1489 Uncharacterized protein Details for DVU1489 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1489 Tuberculist Genomic Region
DVU1495 Uncharacterized protein Details for DVU1495 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1495 Tuberculist Genomic Region	DVU1502 Portal protein, HK97 family Details for DVU1502 - Portal protein, HK97 family GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1502 Tuberculist Genomic Region
DVU1497 Head-tail adaptor, putative Details for DVU1497 - Head-tail adaptor, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1497 Tuberculist Genomic Region	DVU1504 Terminase, small subunit Details for DVU1504 - Terminase, small subunit GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1504 Tuberculist Genomic Region
DVU1501 ClpP protease family protein Details for DVU1501 - ClpP protease family protein GO Terms: GO:0008233 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1501 Tuberculist Genomic Region	DVU1505 Holin, putative Details for DVU1505 - Holin, putative GO Terms: GO:0004519, GO:0003676 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1505 Tuberculist Genomic Region
DVU1503 Terminase, large subunit Details for DVU1503 - Terminase, large subunit GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1503 Tuberculist Genomic Region	DVU1506 Uncharacterized protein Details for DVU1506 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1506 Tuberculist Genomic Region
DVU1523 Uncharacterized protein Details for DVU1523 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1523 Tuberculist Genomic Region	DVU1972 Uncharacterized protein Details for DVU1972 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1972 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 640 Motif 2:

e-value: 3800

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0525 Transcriptional regulator, MarR family	up-regulates	0.36	DVU0525
DVU0813 Heat-inducible transcription repressor HrcA	up-regulates	0.11	DVU0813
DVU1083 Phosphate regulon transcriptional regulator PhoB	up-regulates	0.13	DVU1083
DVU1745 DNA-binding protein	up-regulates	0.31	DVU1745
DVU1754 Uncharacterized protein	up-regulates	0.10	DVU1754
DVU2819 Transcriptional regulator, TetR family	up-regulates	0.10	DVU2819
DVU3313 Transcriptional regulator, LysR family	down-regulates	-0.15	DVU3313

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0016787	hydrolase activity	100	0.16	2	0.0060
MF	GO:0004519	endonuclease activity	5	0.01	1	0.0078
MF	GO:0004518	nuclease activity	15	0.02	1	0.0233
MF	GO:0008233	peptidase activity	20	0.03	1	0.0310
MF	GO:0016788	hydrolase activity, acting on ester bond...	29	0.05	1	0.0448

Essentiality

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