Desulfovibrio vulgaris Hildenborough Module 194 Residual: 0.46 | Syntrophy Portal

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Summary

Residual: 0.46 Score: -33.674 version: dvh_cmonkey_11_Mar_02

Members

DVU0256 ATP-dependent RNA helicase, DEAD/DEAH box family Details for DVU0256 - ATP-dependent RNA helicase, DEAD/DEAH box family GO Terms: GO:0005524, GO:0004386, GO:0003676 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0256 Tuberculist Genomic Region	DVU0853 RNA-splicing ligase RtcB Details for DVU0853 - RNA-splicing ligase RtcB GO Terms: GO:0008452, GO:0006396, GO:0046872 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0853 Tuberculist Genomic Region
DVU0396 DNA-binding protein HU Details for DVU0396 - DNA-binding protein HU GO Terms: GO:0003677, GO:0030261 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0396 Tuberculist Genomic Region	DVU1012 Hemolysin-type calcium-binding repeat protein Details for DVU1012 - Hemolysin-type calcium-binding repeat protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1012 Tuberculist Genomic Region
DVU0683 Protein HflC Details for DVU0683 - Protein HflC GO Terms: GO:0016021, GO:0052547 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0683 Tuberculist Genomic Region	DVU1603 Leucyl/phenylalanyl-tRNA--protein transferase Details for DVU1603 - Leucyl/phenylalanyl-tRNA--protein transferase GO Terms: GO:0005737, GO:0008914, GO:0030163 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1603 Tuberculist Genomic Region
DVU0910 Flagellar motor switch protein FliM Details for DVU0910 - Flagellar motor switch protein FliM GO Terms: GO:0009425, GO:0071973, GO:0003774 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0910 Tuberculist Genomic Region	DVU2324 Copper-translocating P-type ATPase Details for DVU2324 - Copper-translocating P-type ATPase GO Terms: GO:0005524, GO:0005507, GO:0004008, GO:0016021 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2324 Tuberculist Genomic Region
DVU0963 NADPH-dependent 7-cyano-7-deazaguanine reductase Details for DVU0963 - NADPH-dependent 7-cyano-7-deazaguanine reductase GO Terms: GO:0005737, GO:0046857, GO:0033739, GO:0008616 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0963 Tuberculist Genomic Region	DVU2468 Tetraacyldisaccharide 4'-kinase Details for DVU2468 - Tetraacyldisaccharide 4'-kinase GO Terms: GO:0005524, GO:0009245, GO:0009029 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2468 Tuberculist Genomic Region
DVU1830 Uncharacterized protein Details for DVU1830 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1830 Tuberculist Genomic Region	DVU2470 Membrane protein, putaive Details for DVU2470 - Membrane protein, putaive GO Terms: GO:0016021 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2470 Tuberculist Genomic Region
DVU2547 Transcriptional regulator, putative Details for DVU2547 - Transcriptional regulator, putative GO Terms: GO:0003677, GO:0005622, GO:0003700, GO:0006351 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2547 Tuberculist Genomic Region	DVU2489 Uncharacterized protein Details for DVU2489 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2489 Tuberculist Genomic Region
DVU0395 HIT family protein Details for DVU0395 - HIT family protein GO Terms: GO:0003824 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0395 Tuberculist Genomic Region	DVU2548 FMN-dependent NADH-azoreductase Details for DVU2548 - FMN-dependent NADH-azoreductase GO Terms: GO:0010181, GO:0008752, GO:0009055, GO:0016652, GO:0016661 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2548 Tuberculist Genomic Region
DVU0595 Uncharacterized protein Details for DVU0595 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0595 Tuberculist Genomic Region	DVU2630 Lipoprotein, putative Details for DVU2630 - Lipoprotein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2630 Tuberculist Genomic Region
DVU0684 HflK protein, putative Details for DVU0684 - HflK protein, putative GO Terms: GO:0016021 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0684 Tuberculist Genomic Region	DVU2974 Uncharacterized protein Details for DVU2974 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2974 Tuberculist Genomic Region
DVU0725 Uncharacterized protein Details for DVU0725 - Uncharacterized protein GO Terms: GO:0003824 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0725 Tuberculist Genomic Region	DVU3344 Uncharacterized protein Details for DVU3344 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3344 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 5500 Motif 2:

e-value: 11000

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0596 DNA-binding response regulator LytR	up-regulates	0.43	DVU0596
DVU0744 Sigma-54 dependent transcriptional regulator/response regulator	up-regulates	0.20	DVU0744
DVU0813 Heat-inducible transcription repressor HrcA	up-regulates	0.31	DVU0813
DVU1517 Transcriptional regulator cII, putative	up-regulates	0.14	DVU1517
DVU3381 Transcriptional regulatory protein zraR	up-regulates	0.11	DVU3381

GO Enrichment

Category:
Annotated

Essentiality

Comments

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