Desulfovibrio vulgaris Hildenborough Module 209 Residual: 0.32

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Summary

Residual: 0.32 Score: -86.2447 version: dvh_cmonkey_11_Mar_02

Members

DVU0572 Uncharacterized protein

Details for DVU0572 - Uncharacterized protein

GO Terms: GO:0035438

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0572

Tuberculist Genomic Region

DVU1984 Peptide methionine sulfoxide reductase MsrA

Details for DVU1984 - Peptide methionine sulfoxide reductase MsrA

GO Terms: GO:0006464, GO:0008113, GO:0030091, GO:0006979

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1984

Tuberculist Genomic Region

DVU0665 Nitrogen fixation protein NifU

Details for DVU0665 - Nitrogen fixation protein NifU

GO Terms: GO:0005506, GO:0016226, GO:0051536, GO:0009399

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0665

Tuberculist Genomic Region

DVU2086 Transcriptional regulator, GntR family

Details for DVU2086 - Transcriptional regulator, GntR family

GO Terms: GO:0003677, GO:0003824, GO:0030170, GO:0003700, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2086

Tuberculist Genomic Region

DVU0813 Heat-inducible transcription repressor HrcA

Details for DVU0813 - Heat-inducible transcription repressor HrcA

GO Terms: GO:0003677, GO:0045892, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0813

Tuberculist Genomic Region

DVU2325 Mercuric transport protein periplasmic component

Details for DVU2325 - Mercuric transport protein periplasmic component

GO Terms: GO:0005507, GO:0006825

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2325

Tuberculist Genomic Region

DVU1457 Thioredoxin reductase, putative

Details for DVU1457 - Thioredoxin reductase, putative

GO Terms: GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1457

Tuberculist Genomic Region

DVU2497 Lipoprotein, putative

Details for DVU2497 - Lipoprotein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2497

Tuberculist Genomic Region

DVU1601 ATP-dependent Clp protease adapter protein ClpS

Details for DVU1601 - ATP-dependent Clp protease adapter protein ClpS

GO Terms: GO:0030163, GO:0006508

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1601

Tuberculist Genomic Region

DVU2893 Flagellar basal-body rod protein, putative

Details for DVU2893 - Flagellar basal-body rod protein, putative

GO Terms: GO:0071973

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2893

Tuberculist Genomic Region

DVU1875 DafA protein

Details for DVU1875 - DafA protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1875

Tuberculist Genomic Region

DVU0576 Peptide methionine sulfoxide reductase MsrB

Details for DVU0576 - Peptide methionine sulfoxide reductase MsrB

GO Terms: GO:0033743, GO:0030091, GO:0006979

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0576

Tuberculist Genomic Region

DVU1876 DnaJ protein, putative

Details for DVU1876 - DnaJ protein, putative

GO Terms: GO:0006457

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1876

Tuberculist Genomic Region

Displaying 1 - 13 of 13

Motifs

Motif 1: e-value: 5300 e-value: 5100

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences
[field_regulator_taxonomy_regulat_1]

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0019538 protein metabolic process 15 0.16 3 0.0002
BP GO:0044267 cellular protein metabolic process 14 0.15 2 0.0077
BP GO:0043170 macromolecule metabolic process 56 0.61 3 0.0119
BP GO:0009057 macromolecule catabolic process 4 0.04 1 0.0428
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0046914 transition metal ion binding 17 0.09 2 0.0033
MF GO:0005507 copper ion binding 3 0.02 1 0.0163
MF GO:0030551 cyclic nucleotide binding 5 0.03 1 0.0271
MF GO:0035438 cyclic-di-GMP binding 5 0.03 1 0.0271
MF GO:0046872 metal ion binding 51 0.28 2 0.0287
MF GO:0043169 cation binding 53 0.29 2 0.0309
MF GO:0005506 iron ion binding 6 0.03 1 0.0324
MF GO:0016491 oxidoreductase activity 68 0.37 2 0.0490

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